[TCDR-2137] Enclone deprecated #558
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| </a> | ||
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| <header> | ||
| <h1><b><span style="color:rgb(120,123,175);font-weight:900">enclone</span></b></h1> | ||
| <h3>Accurate and user-friendly computational tool for clonal grouping to study the adaptive immune system | ||
| <h3> | ||
| <h4>(Antigen analysis is not supported)</h4> | ||
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@@ -49,7 +49,7 @@ <h4>(Antigen analysis is not supported)</h4> | |
| </p> | ||
| <p style="border: 2px; border-style: solid; border-color: black; background-color: #EBF4FC; | ||
| padding: 8px; font-size: 110%"> | ||
| <span style="color:rgb(120,123,175);font-weight:900">enclone</span> is provided as a tool for use | ||
| by the community to accelerate immunology research. | ||
| <span style="color:rgb(120,123,175);font-weight:900">enclone</span> is only supported via | ||
| <a href="mailto:[email protected]"><span | ||
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@@ -239,7 +239,7 @@ <h2>Inputs to <span style="color:rgb(120,123,175);font-weight:900">enclone</span | |
| <p><a name="software" style="display:block; position:relative; top:-20px;"></a></p> | ||
| <h2>The <span style="color:rgb(120,123,175);font-weight:900">enclone</span> software</h2> | ||
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| <p><span style="color:rgb(120,123,175);font-weight:900">enclone</span> was a beta software<sup>††</sup> released | ||
| under <a href="LICENSE.txt">this license</a>. | ||
| Binary executables for Linux and Mac and Windows can be directly downloaded from this page, as can | ||
| sample 10x Genomics datasets. | ||
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@@ -270,13 +270,6 @@ <h2>The <span style="color:rgb(120,123,175);font-weight:900">enclone</span> soft | |
| solution</a>. | ||
| </p> | ||
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| <p><a name="download" style="display:block; position:relative; top:-20px;"></a></p> | ||
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@@ -958,9 +951,6 @@ <h2>Questions</h2> | |
| padding: 8px; font-size: 110%"> | ||
| <span style="color:rgb(120,123,175);font-weight:900">enclone</span> is provided as a tool for use by the | ||
| community. | ||
| </p> | ||
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| <img src="img/enclone_banner.png" alt="enclone banner" title="enclone banner" width=100% /> | ||
| </a> | ||
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| <p style="border: 2px; border-style: solid; border-color: black; background-color: #EBF4FC; | ||
| padding: 8px; font-size: 110%"> | ||
| #enclone is deprecated and will no longer receive updates or feature enhancements. | ||
| #It will remain available for a limited time but will be disabled the future. We recommend transitioning to the improved functionality now integrated directly within Cell Ranger. | ||
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| </p> | ||
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| <header> | ||
| <h1><b>#enclone</b></h1> | ||
| <h3>Accurate and user-friendly computational tool for clonal grouping to study the adaptive immune system<h3> | ||
| <h4>(Antigen analysis is not supported)</h4> | ||
| </header> | ||
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@@ -23,7 +30,7 @@ | |
| acids.</p> | ||
| <p style="border: 2px; border-style: solid; border-color: black; background-color: #EBF4FC; | ||
| padding: 8px; font-size: 110%"> | ||
| #enclone is provided as a tool for use by the community to accelerate immunology research. | ||
| #enclone is only supported via | ||
| <a href="mailto:[email protected]">#[email protected]</a>. | ||
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There was a problem hiding this comment. We should remove the enclone mailing list call-out. There was a problem hiding this comment. Done! Tried not to touch help text and warning message here though. Could you please double check that I didn't break anything? There was a problem hiding this comment. Let's just delete the |
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| The clonotype assignment algorithm that is part of #enclone is integrated into Cell Ranger. | ||
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@@ -183,7 +190,7 @@ sgRNA, and other cellular features. You can see a list of publications that use | |
| <p><a name="software" style="display:block; position:relative; top:-20px;"></a></p> | ||
| <h2>The #enclone software</h2> | ||
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| <p>#enclone software<sup>††</sup> is released under <a href="LICENSE.txt">this license</a>. | ||
| Binary executables for Linux and Mac and Windows can be directly downloaded from this page, as can | ||
| sample 10x Genomics datasets. | ||
| #enclone can be run on a laptop, desktop, or server. | ||
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@@ -207,13 +214,6 @@ analysis of V(D)J and other data from the | |
| solution</a>. | ||
| </p> | ||
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| <hr> | ||
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| <p><a name="download" style="display:block; position:relative; top:-20px;"></a></p> | ||
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@@ -777,8 +777,7 @@ screenshot, except when necessary. Please send <b>both the command you used and | |
| <p style="border: 2px; border-style: solid; border-color: black; background-color: #EBF4FC; | ||
| padding: 8px; font-size: 110%"> | ||
| #enclone is provided as a tool for use by the community. | ||
| #enclone is now deprecated and will no longer receive updates or feature enhancements. | ||
| </p> | ||
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| <hr> | ||
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| # THIS IS AN AUTOGENERATED FILE. DO NOT EDIT THIS FILE DIRECTLY. | ||
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| # yarn lockfile v1 | ||
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This file appears to have been auto-generated from
index.html.srcbut the two appear different. Was this file edited by hand?There was a problem hiding this comment.
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@macklin-10x I did a find in folder for the word "beta". Should I just delete this file?
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Definitely not this one. If anything, we should delete the
.srcversions since we're never going to regenerate the help site.