From 8be9c65bc6908c52297835da17d75c2c5d9719da Mon Sep 17 00:00:00 2001 From: sharkinsspatial Date: Wed, 23 Oct 2024 21:17:00 -0400 Subject: [PATCH] Include imagecodecs and hdf5plugin in all CI environments. --- ci/environment.yml | 3 +++ ci/min-deps.yml | 5 +++++ ci/upstream.yml | 4 ++++ 3 files changed, 12 insertions(+) diff --git a/ci/environment.yml b/ci/environment.yml index 25ac0bb1..5675a02b 100644 --- a/ci/environment.yml +++ b/ci/environment.yml @@ -14,6 +14,7 @@ dependencies: - packaging - universal_pathlib - hdf5plugin + - numcodecs # Testing - codecov - pre-commit @@ -33,5 +34,7 @@ dependencies: - tifffile # for opening FITS files - astropy + - pip - pip: + - imagecodecs - imagecodecs-numcodecs diff --git a/ci/min-deps.yml b/ci/min-deps.yml index 7ca8c0b3..a4684892 100644 --- a/ci/min-deps.yml +++ b/ci/min-deps.yml @@ -13,6 +13,7 @@ dependencies: - packaging - ujson - universal_pathlib + - hdf5plugin # Testing - codecov - pre-commit @@ -24,3 +25,7 @@ dependencies: - pytest - pooch - fsspec + - pip + - pip: + - imagecodecs + - imagecodecs-numcodecs diff --git a/ci/upstream.yml b/ci/upstream.yml index 2c2680bc..71871154 100644 --- a/ci/upstream.yml +++ b/ci/upstream.yml @@ -11,6 +11,8 @@ dependencies: - packaging - ujson - universal_pathlib + - hdf5plugin + - numcodecs # Testing - codecov - pre-commit @@ -27,4 +29,6 @@ dependencies: - icechunk # Installs zarr v3 as dependency - git+https://github.com/pydata/xarray@zarr-v3 # zarr-v3 compatibility branch - git+https://github.com/zarr-developers/numcodecs@zarr3-codecs # zarr-v3 compatibility branch + - imagecodecs + - imagecodecs-numcodecs # - git+https://github.com/fsspec/kerchunk@main # kerchunk is currently incompatible with zarr-python v3 (https://github.com/fsspec/kerchunk/pull/516)