From 97ef92ea8029b7f5bec3884dd64a064c567e4606 Mon Sep 17 00:00:00 2001 From: ChuckKollar Date: Fri, 26 Jul 2024 14:58:07 -0400 Subject: [PATCH 1/3] Updated requirements.txt to Flask 3x --- src/requirements.txt | 13 ++++++------- 1 file changed, 6 insertions(+), 7 deletions(-) diff --git a/src/requirements.txt b/src/requirements.txt index f3c5606..bbfaf7d 100644 --- a/src/requirements.txt +++ b/src/requirements.txt @@ -1,16 +1,15 @@ -ubkg-api==2.1.4 -Flask==2.1.3 +Flask==3.0.3 +# Flask depends on Werkzeug... +Werkzeug==3.0.3 + +#git+https://github.com/x-atlas-consortia/ubkg-api.git@flask-v3x +#ubkg-api==2.1.4 neo4j==5.15.0 # for analysis of tabular data pandas==1.5.0 numpy==1.23.5 -# Flask 2.1.3 installs the latest Werkzeug==3.0.0 (released on 9/30/2023) and causing import issues -# Use a pinned version 2.3.7 (the latest release before 3.0.0) to mitigate temporaryly -# Will upgrade Flask to newer version later on across all APIs. 10/3/2023 - Zhou -Werkzeug==2.3.7 - # Cells API client # hubmap-api-py-client==0.0.9 From e8054d1c11698b83d1fb281c41d1e1880a83b6bd Mon Sep 17 00:00:00 2001 From: yuanzhou Date: Fri, 2 Aug 2024 10:43:13 -0400 Subject: [PATCH 2/3] Update requirements.txt for DEV testing FYI @ChuckKollar I'll update this too when merging into `main` --- src/requirements.txt | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/src/requirements.txt b/src/requirements.txt index bbfaf7d..08fa600 100644 --- a/src/requirements.txt +++ b/src/requirements.txt @@ -2,8 +2,8 @@ Flask==3.0.3 # Flask depends on Werkzeug... Werkzeug==3.0.3 -#git+https://github.com/x-atlas-consortia/ubkg-api.git@flask-v3x -#ubkg-api==2.1.4 +git+https://github.com/x-atlas-consortia/ubkg-api.git@dev-integrate +#ubkg-api==2.1.6 neo4j==5.15.0 # for analysis of tabular data From dceed5024fabd3ac904403a0883c78a42863d421 Mon Sep 17 00:00:00 2001 From: yuanzhou Date: Mon, 5 Aug 2024 21:44:04 -0400 Subject: [PATCH 3/3] Update to ubkg-api==2.1.6 --- src/requirements.txt | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/src/requirements.txt b/src/requirements.txt index 08fa600..51e29d6 100644 --- a/src/requirements.txt +++ b/src/requirements.txt @@ -2,8 +2,8 @@ Flask==3.0.3 # Flask depends on Werkzeug... Werkzeug==3.0.3 -git+https://github.com/x-atlas-consortia/ubkg-api.git@dev-integrate -#ubkg-api==2.1.6 +#git+https://github.com/x-atlas-consortia/ubkg-api.git@dev-integrate +ubkg-api==2.1.6 neo4j==5.15.0 # for analysis of tabular data