diff --git a/workflows/bacterial_genomics/amr_gene_detection/.dockstore.yml b/workflows/bacterial_genomics/amr_gene_detection/.dockstore.yml
new file mode 100644
index 000000000..5aa4b682a
--- /dev/null
+++ b/workflows/bacterial_genomics/amr_gene_detection/.dockstore.yml
@@ -0,0 +1,19 @@
+version: 1.2
+workflows:
+- name: main
+  subclass: Galaxy
+  publish: true
+  primaryDescriptorPath: /amr_gene_detection.ga
+  testParameterFiles:
+  - /amr_gene_detection-tests.yml
+  authors:
+  - name: ABRomics
+    email: mailto:abromics-support@groupes.france-bioinformatique.fr
+  - name: abromics-consortium
+    url: https://www.abromics.fr/
+  - name: Pierre Marin
+    alternateName: pimarin
+    orcid: 0000-0002-8304-138X
+  - name: Clea Siguret
+    alternateName: clsiguret
+    orcid: 0009-0005-6140-0379
diff --git a/workflows/bacterial_genomics/amr_gene_detection/CHANGELOG.md b/workflows/bacterial_genomics/amr_gene_detection/CHANGELOG.md
new file mode 100644
index 000000000..cfbdf5f33
--- /dev/null
+++ b/workflows/bacterial_genomics/amr_gene_detection/CHANGELOG.md
@@ -0,0 +1,5 @@
+# Changelog
+
+## [1.0] - 05-06-2024
+
+- First release
\ No newline at end of file
diff --git a/workflows/bacterial_genomics/amr_gene_detection/README.md b/workflows/bacterial_genomics/amr_gene_detection/README.md
new file mode 100644
index 000000000..e762f007b
--- /dev/null
+++ b/workflows/bacterial_genomics/amr_gene_detection/README.md
@@ -0,0 +1,30 @@
+# AMR gene detection workflow in an assembled bacterial genome (v1.0)
+
+This workflow uses assembled bacterial genome fasta files (but can be any fasta file) and executes the following steps:
+1. Genomic detection
+    - Antimicrobial resistance gene identification:
+        - **staramr** to blast against ResFinder and PlasmidFinder database
+        - **AMRFinderPlus** to find antimicrobial resistance genes and point mutations 
+    - Virulence gene identification:
+        - **ABRicate** with VFDB_A database
+2. Aggregating outputs into a single JSON file
+    - **ToolDistillator** to extract and aggregate information from different tool outputs to JSON parsable files
+
+## Inputs
+
+1. Assembled bacterial genome in fasta format.
+
+## Outputs
+
+1. Genomic detection
+    - Antimicrobial resistance gene identification:
+        - AMR gene list
+        - MLST typing
+        - Plasmid gene identification
+        - Blast hits
+        - AMR gene fasta (assembled nucleotide sequences)
+        - Point mutation list
+    - Virulence gene identification:
+        - Gene identification in tabular format
+2. Aggregating outputs:
+    - JSON file with information about the outputs of **staramr**, **AMRFinderPlus**, **ABRicate**
\ No newline at end of file
diff --git a/workflows/bacterial_genomics/amr_gene_detection/amr_gene_detection-tests.yml b/workflows/bacterial_genomics/amr_gene_detection/amr_gene_detection-tests.yml
new file mode 100644
index 000000000..c7a1de448
--- /dev/null
+++ b/workflows/bacterial_genomics/amr_gene_detection/amr_gene_detection-tests.yml
@@ -0,0 +1,62 @@
+- doc: Test outline for amr_gene_detection.ga
+  job:
+    Input sequence fasta:
+      class: File
+      path: https://zenodo.org/records/11488310/files/shovill_contigs_fasta
+  outputs:
+    staramr_detailed_summary:
+        assert:
+        has_text:
+          text: "Resistance"
+        has_n_columns:
+          n: 12
+    staramr_resfinder_report:
+        assert:
+        has_text:
+          text: "tetracycline"
+        has_n_columns:
+          n: 13
+    staramr_mlst_report:
+      assert:
+        has_text:
+          text: "efaecalis"
+        has_n_columns:
+          n: 10
+    staramr_plasmidfinder_report:
+      assert:
+        has_text:
+          text: "CP002494"
+        has_n_columns:
+          n: 9
+    staramr_summary:
+      assert:
+        has_text:
+          text: "streptomycin"
+        has_n_columns:
+          n: 12
+    amrfinderplus_report:
+      assert:
+        has_text:
+          text: "Enterococcus faecalis quinolone resistant ParC"
+        has_n_columns:
+          n: 23
+    amrfinderplus_mutation:
+      assert:
+        has_text:
+          text: "cardiolipin synthase Cls"
+        has_n_columns:
+          n: 23
+    abricate_virulence_report:
+      assert:
+        has_text:
+          text: "endocarditis specific antigen"
+        has_n_columns:
+          n: 15
+    tooldistillator_summarize:
+      assert:
+        has_text:
+          text: "% Identity to reference sequence"
+        has_text:
+          text: "Enterococcus faecalis V583"
+        has_text:
+          text: "CGE Predicted Phenotype"
diff --git a/workflows/bacterial_genomics/amr_gene_detection/amr_gene_detection.ga b/workflows/bacterial_genomics/amr_gene_detection/amr_gene_detection.ga
new file mode 100644
index 000000000..17915347d
--- /dev/null
+++ b/workflows/bacterial_genomics/amr_gene_detection/amr_gene_detection.ga
@@ -0,0 +1,687 @@
+{
+    "a_galaxy_workflow": "true",
+    "annotation": "Antimicrobial resistance gene detection from assembled bacterial genomes",
+    "creator": [
+        {
+            "class": "Person",
+            "email": "mailto:abromics-support@groupes.france-bioinformatique.fr",
+            "name": "ABRomics"
+        },
+        {
+            "class": "Organization",
+            "name": "abromics-consortium",
+            "url": "https://www.abromics.fr/"
+        },
+        {
+            "alternateName": "pimarin",
+            "class": "Person",
+            "identifier": "https://orcid.org/0000-0002-8304-138X",
+            "name": "Pierre Marin",
+            "alternateName": "pimarin"
+        },
+        {
+            "alternateName": "clsiguret",
+            "class": "Person",
+            "identifier": "https://orcid.org/0000-0002-8304-138X",
+            "name": "Clea Siguret",
+            "alternateName": "clsiguret"
+        }
+    ],
+    "format-version": "0.1",
+    "license": "GPL-3.0-or-later",
+    "release": "1.0",
+    "name": "amr_gene_detection",
+    "steps": {
+        "0": {
+            "annotation": "Can be any fasta file.",
+            "content_id": null,
+            "errors": null,
+            "id": 0,
+            "input_connections": {},
+            "inputs": [
+                {
+                    "description": "Can be any fasta file.",
+                    "name": "Input sequence fasta"
+                }
+            ],
+            "label": "Input sequence fasta",
+            "name": "Input dataset",
+            "outputs": [],
+            "position": {
+                "left": 2.4727149882562167,
+                "top": 677.1068397845053
+            },
+            "tool_id": null,
+            "tool_state": "{\"optional\": false, \"format\": [\"fasta\"], \"tag\": null}",
+            "tool_version": null,
+            "type": "data_input",
+            "uuid": "67722a09-41de-4af4-9e60-378b2738f910",
+            "when": null,
+            "workflow_outputs": []
+        },
+        "1": {
+            "annotation": "Select the database to identify resistance-associated point mutations with AMRFinderPlus.",
+            "content_id": null,
+            "errors": null,
+            "id": 1,
+            "input_connections": {},
+            "inputs": [
+                {
+                    "description": "Select the database to identify resistance-associated point mutations with AMRFinderPlus.",
+                    "name": "Select a taxonomy group point mutation"
+                }
+            ],
+            "label": "Select a taxonomy group point mutation",
+            "name": "Input parameter",
+            "outputs": [],
+            "position": {
+                "left": 6.398714988256147,
+                "top": 785.1080080587546
+            },
+            "tool_id": null,
+            "tool_state": "{\"default\": \"Enterococcus_faecalis\", \"restrictions\": [\"Acinetobacter_baumannii\", \"Burkholderia_cepacia\", \"Burkholderia_pseudomallei\", \"Campylobacter\", \"Citrobacter_freundii\", \"Clostridioides_difficile\", \"Enterobacter_cloacae\", \"Enterococcus_faecalis\", \"Enterococcus_faecium\", \"Escherichia\", \"Klebsiella_aerogenes\", \"Klebsiella_oxytoca\", \"Klebsiella_pneumoniae\", \"Neisseria_gonorrhoeae\", \"Neisseria_meningitidis\", \"Pseudomonas_aeruginosa\", \"Salmonella\", \"Serratia_marcescens\", \"Staphylococcus_aureus\", \"Staphylococcus_pseudintermedius\", \"Streptococcus_agalactiae\", \"Streptococcus_pneumoniae\", \"Streptococcus_pyogenes\", \"Vibrio_cholerae\"], \"parameter_type\": \"text\", \"optional\": true}",
+            "tool_version": null,
+            "type": "parameter_input",
+            "uuid": "6092b401-9042-4ec2-9970-d614afd77441",
+            "when": null,
+            "workflow_outputs": []
+        },
+        "2": {
+            "annotation": "Select the database to identify AMR genes with AMRFinderPlus.",
+            "content_id": null,
+            "errors": null,
+            "id": 2,
+            "input_connections": {},
+            "inputs": [
+                {
+                    "description": "Select the database to identify AMR genes with AMRFinderPlus.",
+                    "name": "Select a AMR genes detection database"
+                }
+            ],
+            "label": "Select a AMR genes detection database",
+            "name": "Input parameter",
+            "outputs": [],
+            "position": {
+                "left": 0,
+                "top": 1031.8311633489975
+            },
+            "tool_id": null,
+            "tool_state": "{\"default\": \"amrfinderplus_V3.12_2024-05-02.2\", \"restrictions\": [\"amrfinderplus_V3.12_2024-05-02.2\"], \"parameter_type\": \"text\", \"optional\": true}",
+            "tool_version": null,
+            "type": "parameter_input",
+            "uuid": "3c9163c4-9393-49ca-8271-b98a89abcfb9",
+            "when": null,
+            "workflow_outputs": []
+        },
+        "3": {
+            "annotation": "Select the database to identify virulence genes with ABRicate..",
+            "content_id": null,
+            "errors": null,
+            "id": 3,
+            "input_connections": {},
+            "inputs": [
+                {
+                    "description": "Select the database to identify virulence genes with ABRicate..",
+                    "name": "Select a virulence genes detection database"
+                }
+            ],
+            "label": "Select a virulence genes detection database",
+            "name": "Input parameter",
+            "outputs": [],
+            "position": {
+                "left": 2.0333251953125,
+                "top": 1166.9166870117188
+            },
+            "tool_id": null,
+            "tool_state": "{\"default\": \"vfdb\", \"restrictions\": [\"vfdb\"], \"parameter_type\": \"text\", \"optional\": true}",
+            "tool_version": null,
+            "type": "parameter_input",
+            "uuid": "eba8ebb2-0072-41dd-a9b2-878d05f04ff6",
+            "when": null,
+            "workflow_outputs": []
+        },
+        "4": {
+            "annotation": "staramr_amr_genes",
+            "content_id": "toolshed.g2.bx.psu.edu/repos/nml/staramr/staramr_search/0.10.0+galaxy0",
+            "errors": null,
+            "id": 4,
+            "input_connections": {
+                "genomes": {
+                    "id": 0,
+                    "output_name": "output"
+                }
+            },
+            "inputs": [],
+            "label": "staramr_amr_genes",
+            "name": "staramr",
+            "outputs": [
+                {
+                    "name": "blast_hits",
+                    "type": "input"
+                },
+                {
+                    "name": "mlst",
+                    "type": "tabular"
+                },
+                {
+                    "name": "summary",
+                    "type": "tabular"
+                },
+                {
+                    "name": "detailed_summary",
+                    "type": "tabular"
+                },
+                {
+                    "name": "resfinder",
+                    "type": "tabular"
+                },
+                {
+                    "name": "plasmidfinder",
+                    "type": "tabular"
+                },
+                {
+                    "name": "settings",
+                    "type": "txt"
+                },
+                {
+                    "name": "excel",
+                    "type": "xlsx"
+                }
+            ],
+            "position": {
+                "left": 496.9350972460573,
+                "top": 0
+            },
+            "post_job_actions": {
+                "RenameDatasetActionblast_hits": {
+                    "action_arguments": {
+                        "newname": "staramr_blast_hits"
+                    },
+                    "action_type": "RenameDatasetAction",
+                    "output_name": "blast_hits"
+                },
+                "RenameDatasetActiondetailed_summary": {
+                    "action_arguments": {
+                        "newname": "staramr_detailed_summary"
+                    },
+                    "action_type": "RenameDatasetAction",
+                    "output_name": "detailed_summary"
+                },
+                "RenameDatasetActionexcel": {
+                    "action_arguments": {
+                        "newname": "staramr_excel_report"
+                    },
+                    "action_type": "RenameDatasetAction",
+                    "output_name": "excel"
+                },
+                "RenameDatasetActionmlst": {
+                    "action_arguments": {
+                        "newname": "staramr_mlst_report"
+                    },
+                    "action_type": "RenameDatasetAction",
+                    "output_name": "mlst"
+                },
+                "RenameDatasetActionplasmidfinder": {
+                    "action_arguments": {
+                        "newname": "staramr_plasmidfinder_report"
+                    },
+                    "action_type": "RenameDatasetAction",
+                    "output_name": "plasmidfinder"
+                },
+                "RenameDatasetActionresfinder": {
+                    "action_arguments": {
+                        "newname": "staramr_resfinder_report"
+                    },
+                    "action_type": "RenameDatasetAction",
+                    "output_name": "resfinder"
+                },
+                "RenameDatasetActionsettings": {
+                    "action_arguments": {
+                        "newname": "staramr_settings"
+                    },
+                    "action_type": "RenameDatasetAction",
+                    "output_name": "settings"
+                },
+                "RenameDatasetActionsummary": {
+                    "action_arguments": {
+                        "newname": "staramr_summary"
+                    },
+                    "action_type": "RenameDatasetAction",
+                    "output_name": "summary"
+                },
+                "TagDatasetActionblast_hits": {
+                    "action_arguments": {
+                        "tags": "staramr_blast_hits"
+                    },
+                    "action_type": "TagDatasetAction",
+                    "output_name": "blast_hits"
+                },
+                "TagDatasetActiondetailed_summary": {
+                    "action_arguments": {
+                        "tags": "staramr_detailed_summary"
+                    },
+                    "action_type": "TagDatasetAction",
+                    "output_name": "detailed_summary"
+                },
+                "TagDatasetActionexcel": {
+                    "action_arguments": {
+                        "tags": "staramr_excel_report"
+                    },
+                    "action_type": "TagDatasetAction",
+                    "output_name": "excel"
+                },
+                "TagDatasetActionmlst": {
+                    "action_arguments": {
+                        "tags": "staramr_mlst_report"
+                    },
+                    "action_type": "TagDatasetAction",
+                    "output_name": "mlst"
+                },
+                "TagDatasetActionplasmidfinder": {
+                    "action_arguments": {
+                        "tags": "staramr_plasmidfinder_report"
+                    },
+                    "action_type": "TagDatasetAction",
+                    "output_name": "plasmidfinder"
+                },
+                "TagDatasetActionresfinder": {
+                    "action_arguments": {
+                        "tags": "staramr_resfinder_report"
+                    },
+                    "action_type": "TagDatasetAction",
+                    "output_name": "resfinder"
+                },
+                "TagDatasetActionsettings": {
+                    "action_arguments": {
+                        "tags": "staramr_settings"
+                    },
+                    "action_type": "TagDatasetAction",
+                    "output_name": "settings"
+                },
+                "TagDatasetActionsummary": {
+                    "action_arguments": {
+                        "tags": "staramr_summary"
+                    },
+                    "action_type": "TagDatasetAction",
+                    "output_name": "summary"
+                }
+            },
+            "tool_id": "toolshed.g2.bx.psu.edu/repos/nml/staramr/staramr_search/0.10.0+galaxy0",
+            "tool_shed_repository": {
+                "changeset_revision": "141afacabcfa",
+                "name": "staramr",
+                "owner": "nml",
+                "tool_shed": "toolshed.g2.bx.psu.edu"
+            },
+            "tool_state": "{\"advanced\": {\"pid_threshold\": \"98.0\", \"plength_resfinder\": \"60.0\", \"plength_pointfinder\": \"95.0\", \"plength_plasmidfinder\": \"60.0\", \"genome_size_lower_bound\": \"4000000\", \"genome_size_upper_bound\": \"6000000\", \"minimum_N50_value\": \"10000\", \"minimum_contig_length\": \"300\", \"unacceptable_number_contigs\": \"1000\", \"report_all_blast\": false, \"exclude_negatives\": false, \"exclude_resistance_phenotypes\": false, \"mlst_scheme\": \"auto\", \"exclude_genes\": {\"exclude_genes_condition\": \"default\", \"__current_case__\": 0}, \"complex_mutations\": {\"complex_mutations_condition\": \"default\", \"__current_case__\": 0}, \"plasmidfinder_type\": \"include_all\"}, \"genomes\": {\"__class__\": \"ConnectedValue\"}, \"pointfinder_db\": {\"use_pointfinder\": \"disabled\", \"__current_case__\": 0}, \"__page__\": null, \"__rerun_remap_job_id__\": null}",
+            "tool_version": "0.10.0+galaxy0",
+            "type": "tool",
+            "uuid": "10eed503-9e5b-4acf-8cd8-29e81d7668a5",
+            "when": null,
+            "workflow_outputs": [
+                {
+                    "label": "staramr_detailed_summary",
+                    "output_name": "detailed_summary",
+                    "uuid": "7a78b7cd-f61a-4c1a-9dea-68714afe61ca"
+                },
+                {
+                    "label": "staramr_plasmidfinder_report",
+                    "output_name": "plasmidfinder",
+                    "uuid": "cfe793e3-ff25-45f6-9f5e-cb4564cfa3ce"
+                },
+                {
+                    "label": "staramr_excel_report",
+                    "output_name": "excel",
+                    "uuid": "a273d6e1-9935-4760-acee-a9d43c06216d"
+                },
+                {
+                    "label": "staramr_mlst_report",
+                    "output_name": "mlst",
+                    "uuid": "95872b33-b343-4225-b150-874b4a10fcb6"
+                },
+                {
+                    "label": "staramr_resfinder_report",
+                    "output_name": "resfinder",
+                    "uuid": "605f5f68-027d-4435-94db-f9d148143994"
+                },
+                {
+                    "label": "staramr_settings",
+                    "output_name": "settings",
+                    "uuid": "12fe0304-ebd1-4ec9-935e-f41a21872caf"
+                },
+                {
+                    "label": "staramr_blast_hits",
+                    "output_name": "blast_hits",
+                    "uuid": "a919060d-f83c-4da6-93ef-6d71fa564e8a"
+                },
+                {
+                    "label": "staramr_summary",
+                    "output_name": "summary",
+                    "uuid": "bf2d3ff0-7116-46a8-91fb-027609667b83"
+                }
+            ]
+        },
+        "5": {
+            "annotation": "amrfinderplus_point_mutation",
+            "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/amrfinderplus/amrfinderplus/3.12.8+galaxy0",
+            "errors": null,
+            "id": 5,
+            "input_connections": {
+                "input_option|amrfinder_db_select": {
+                    "id": 2,
+                    "output_name": "output"
+                },
+                "input_option|input_mode|nucleotide_input": {
+                    "id": 0,
+                    "output_name": "output"
+                },
+                "organism_options|organism_conditionnal|organism": {
+                    "id": 1,
+                    "output_name": "output"
+                }
+            },
+            "inputs": [],
+            "label": "amrfinderplus_point_mutation",
+            "name": "AMRFinderPlus",
+            "outputs": [
+                {
+                    "name": "amrfinderplus_report",
+                    "type": "tabular"
+                },
+                {
+                    "name": "mutation_all_report",
+                    "type": "tabular"
+                },
+                {
+                    "name": "nucleotide_output",
+                    "type": "fasta"
+                }
+            ],
+            "position": {
+                "left": 641.3405290986273,
+                "top": 837.2197586407639
+            },
+            "post_job_actions": {
+                "TagDatasetActionamrfinderplus_report": {
+                    "action_arguments": {
+                        "tags": "amrfinderplus_report"
+                    },
+                    "action_type": "TagDatasetAction",
+                    "output_name": "amrfinderplus_report"
+                },
+                "TagDatasetActionmutation_all_report": {
+                    "action_arguments": {
+                        "tags": "amrfinderplus_mutation"
+                    },
+                    "action_type": "TagDatasetAction",
+                    "output_name": "mutation_all_report"
+                },
+                "TagDatasetActionnucleotide_output": {
+                    "action_arguments": {
+                        "tags": "amrfinderplus_nucleotide"
+                    },
+                    "action_type": "TagDatasetAction",
+                    "output_name": "nucleotide_output"
+                }
+            },
+            "tool_id": "toolshed.g2.bx.psu.edu/repos/iuc/amrfinderplus/amrfinderplus/3.12.8+galaxy0",
+            "tool_shed_repository": {
+                "changeset_revision": "7844dbe4f8e2",
+                "name": "amrfinderplus",
+                "owner": "iuc",
+                "tool_shed": "toolshed.g2.bx.psu.edu"
+            },
+            "tool_state": "{\"input_option\": {\"amrfinder_db_select\": {\"__class__\": \"ConnectedValue\"}, \"input_mode\": {\"input_select\": \"nucleotide\", \"__current_case__\": 0, \"nucleotide_input\": {\"__class__\": \"ConnectedValue\"}, \"nucleotide_flank5_size\": \"0\"}}, \"options\": {\"ident_min\": \"-1.0\", \"coverage_min\": \"0.5\", \"translation_table\": \"11\", \"plus\": true, \"report_all_equal\": true, \"print_node\": true, \"name\": null}, \"organism_options\": {\"organism_conditionnal\": {\"organism_select\": \"add_organism\", \"__current_case__\": 0, \"organism\": {\"__class__\": \"ConnectedValue\"}, \"mutation_all\": true, \"report_common\": true}}, \"__page__\": null, \"__rerun_remap_job_id__\": null}",
+            "tool_version": "3.12.8+galaxy0",
+            "type": "tool",
+            "uuid": "3b79182a-17e6-46ec-9623-99dd5838f7cc",
+            "when": null,
+            "workflow_outputs": [
+                {
+                    "label": "amrfinderplus_nucleotide",
+                    "output_name": "nucleotide_output",
+                    "uuid": "7c952fb9-0d93-4c24-9bac-3c5373d2af07"
+                },
+                {
+                    "label": "amrfinderplus_mutation",
+                    "output_name": "mutation_all_report",
+                    "uuid": "5b415cff-3d62-4e3b-997c-b01a940c1938"
+                },
+                {
+                    "label": "amrfinderplus_report",
+                    "output_name": "amrfinderplus_report",
+                    "uuid": "6a5038ba-93fd-4e89-a00c-2b458578898b"
+                }
+            ]
+        },
+        "6": {
+            "annotation": "abricate_virulence",
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+                    "action_type": "TagDatasetAction",
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+            "type": "tool",
+            "uuid": "f51a45e6-f937-4286-a2b7-f0ff71febb67",
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+                    "uuid": "a1347ac2-372c-42a4-953e-e9b5422b9b5d"
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+            ]
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+            "annotation": "ToolDistillator extracts results from tools and creates a JSON file for each tool",
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+                    "output_name": "mlst"
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+                "tool_section|tools_1|select_tool|setting_file_path": {
+                    "id": 4,
+                    "output_name": "settings"
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+                "tool_section|tools_2|select_tool|input": {
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+                    "output_name": "amrfinderplus_report"
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+                    "output_name": "output"
+                }
+            },
+            "inputs": [],
+            "label": "ToolDistillator",
+            "name": "ToolDistillator",
+            "outputs": [
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+                    "type": "input"
+                }
+            ],
+            "position": {
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+                    "action_type": "TagDatasetAction",
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+            "tool_version": "0.8.5.0+galaxy0",
+            "type": "tool",
+            "uuid": "1589f8a1-65b6-43f0-9e75-cad9b1752e5c",
+            "when": null,
+            "workflow_outputs": [
+                {
+                    "label": "tooldistillator_results",
+                    "output_name": "output_json",
+                    "uuid": "fd122fdd-0907-416d-85a3-30521674a50b"
+                }
+            ]
+        },
+        "8": {
+            "annotation": "ToolDistillator summarize groups all JSON file into a unique JSON file",
+            "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/tooldistillator_summarize/tooldistillator_summarize/0.8.5.0+galaxy0",
+            "errors": null,
+            "id": 8,
+            "input_connections": {
+                "summarize_data": {
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+                    "output_name": "output_json"
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+            },
+            "inputs": [],
+            "label": "ToolDistillator summarize",
+            "name": "ToolDistillator Summarize",
+            "outputs": [
+                {
+                    "name": "summary_json",
+                    "type": "json"
+                }
+            ],
+            "position": {
+                "left": 1510.406873337906,
+                "top": 835.1044439315301
+            },
+            "post_job_actions": {
+                "RenameDatasetActionsummary_json": {
+                    "action_arguments": {
+                        "newname": "tooldistillator_summarize"
+                    },
+                    "action_type": "RenameDatasetAction",
+                    "output_name": "summary_json"
+                },
+                "TagDatasetActionsummary_json": {
+                    "action_arguments": {
+                        "tags": "tooldistillator_summarize"
+                    },
+                    "action_type": "TagDatasetAction",
+                    "output_name": "summary_json"
+                }
+            },
+            "tool_id": "toolshed.g2.bx.psu.edu/repos/iuc/tooldistillator_summarize/tooldistillator_summarize/0.8.5.0+galaxy0",
+            "tool_shed_repository": {
+                "changeset_revision": "6ff67d2860e1",
+                "name": "tooldistillator_summarize",
+                "owner": "iuc",
+                "tool_shed": "toolshed.g2.bx.psu.edu"
+            },
+            "tool_state": "{\"summarize_data\": {\"__class__\": \"ConnectedValue\"}, \"__page__\": null, \"__rerun_remap_job_id__\": null}",
+            "tool_version": "0.8.5.0+galaxy0",
+            "type": "tool",
+            "uuid": "a88f6b82-502c-46cf-a174-2c8361e8e8dd",
+            "when": null,
+            "workflow_outputs": [
+                {
+                    "label": "tooldistillator_summarize",
+                    "output_name": "summary_json",
+                    "uuid": "d5921f67-84d7-4265-926b-86cb3e2977b0"
+                }
+            ]
+        }
+    },
+    "tags": [
+        "fasta",
+        "Genomics",
+        "ABRomics",
+        "antibiotic-resistance",
+        "antimicrobial-resistance-genes",
+        "antimicrobial resistance",
+        "bacterial-genomics",
+        "AMR",
+        "AMR-detection"
+    ],
+    "uuid": "dfcedd6a-9dc1-4dcd-8b15-dbd21482f463",
+    "version": 1
+}
\ No newline at end of file