diff --git a/467_scNanoGPS/liqa.eb b/467_scNanoGPS/liqa.eb index 347053da..14af8be1 100644 --- a/467_scNanoGPS/liqa.eb +++ b/467_scNanoGPS/liqa.eb @@ -20,18 +20,16 @@ checksums = ['f8b2e6f0226d99f513d17be3758e6b3e2e9b7b40579f840d28737e827358850e'] # OK Scipy # OK UPDATED Lifelines - already lifelines in synthcity not used 2023a # OK R - # ADD_TO_CRAN gcmr + # OK ADD_TO_CRAN gcmr # OK betareg -# builddependencies = [('poetry', '1.5.1')] dependencies = [ ('Python', '3.11.3'), ('SciPy-bundle', '2023.07'), ('Pysam', '0.22.0'), ('lifelines', '0.28.0'), ('R', '4.3.2'), - # ('R-bundle-CRAN', '2023.12'), - ('R-bundle-CRAN-test-gcmr', '2023.12'), + ('R-bundle-CRAN', '2023.12'), ] use_pip = True diff --git a/467_scNanoGPS/scNanoGPS_v2.eb b/467_scNanoGPS/scNanoGPS_v2.eb index 66654964..e8d16719 100644 --- a/467_scNanoGPS/scNanoGPS_v2.eb +++ b/467_scNanoGPS/scNanoGPS_v2.eb @@ -39,7 +39,7 @@ checksums = ['60cce1c771283b6d7a3639aa5744acfd6162306d95dd419ad3c265461fdda218'] # OK Scipy # OK UPDATED Lifelines - already lifelines in synthcity not used 2023a # OK R - # ADD_TO_CRAN gcmr + # OK ADD_TO_CRAN gcmr # OK betareg dependencies = [ @@ -60,9 +60,6 @@ dependencies = [ ('BCFtools', '1.21'), ('gffread', '0.12.7'), ('LIQA', '1.3.4'), - # ('lifelines', '0.28.0'), - # ('R', '4.3.2'), - # ('R-bundle-CRAN', '2023.12'), # annovar ] @@ -75,10 +72,6 @@ exts_default_options = { } exts_list = [ - # ('liqa', '1.3.4', { - # 'modulename': False, - # 'checksums': ['f8b2e6f0226d99f513d17be3758e6b3e2e9b7b40579f840d28737e827358850e'], - # }), ('Distance', '0.1.3', { 'checksums': ['60807584f5b6003f5c521aa73f39f51f631de3be5cccc5a1d67166fcbf0d4551'], }),