From d60dc6d674a3ad162c3526e32f89982bf39d57d7 Mon Sep 17 00:00:00 2001 From: Thomas Fischer Date: Thu, 7 Sep 2023 11:22:29 +0200 Subject: [PATCH 1/4] [NL/DOF] Init MeshComponentMap::nop in the class declaration --- NumLib/DOF/MeshComponentMap.cpp | 3 --- NumLib/DOF/MeshComponentMap.h | 3 ++- 2 files changed, 2 insertions(+), 4 deletions(-) diff --git a/NumLib/DOF/MeshComponentMap.cpp b/NumLib/DOF/MeshComponentMap.cpp index d3a08afbfb3..89730484aee 100644 --- a/NumLib/DOF/MeshComponentMap.cpp +++ b/NumLib/DOF/MeshComponentMap.cpp @@ -24,9 +24,6 @@ namespace NumLib { using namespace detail; -GlobalIndexType const MeshComponentMap::nop = - std::numeric_limits::max(); - #ifdef USE_PETSC MeshComponentMap::MeshComponentMap( std::vector const& components, ComponentOrder order) diff --git a/NumLib/DOF/MeshComponentMap.h b/NumLib/DOF/MeshComponentMap.h index c7c2cb619e2..02d647f50ff 100644 --- a/NumLib/DOF/MeshComponentMap.h +++ b/NumLib/DOF/MeshComponentMap.h @@ -137,7 +137,8 @@ class MeshComponentMap final /// A value returned if no global index was found for the requested /// location/component. The value is implementation dependent. - static NUMLIB_EXPORT GlobalIndexType const nop; + static constexpr NUMLIB_EXPORT GlobalIndexType const nop = + std::numeric_limits::max(); #ifndef NDEBUG const detail::ComponentGlobalIndexDict& getDictionary() const From 7860d4c2ea538edd058c6710e521f8733e5ab4ea Mon Sep 17 00:00:00 2001 From: Thomas Fischer Date: Fri, 8 Sep 2023 14:10:21 +0200 Subject: [PATCH 2/4] [T] Test for output of linear order variable on sub-mesh only This crashes with the current master; the next commit will fix ogs --- ...e_1x1_quad8_1e2_bottom_ts_0_t_0.000000.vtu | 48 ++++++ ...e_1x1_quad8_1e2_bottom_ts_1_t_1.000000.vtu | 48 ++++++ ...e_1x1_quad8_1e2_bottom_ts_2_t_2.000000.vtu | 48 ++++++ .../Data/TH2M/HM/flow_fully_saturated_gas.prj | 146 ++++++++++++++---- ...e_1x1_quad8_1e2_bottom_ts_0_t_0.000000.vtu | 48 ++++++ ...e_1x1_quad8_1e2_bottom_ts_1_t_1.000000.vtu | 48 ++++++ ...e_1x1_quad8_1e2_bottom_ts_2_t_2.000000.vtu | 48 ++++++ 7 files changed, 401 insertions(+), 33 deletions(-) create mode 100644 Tests/Data/TH2M/HM/empty_variables_flow_fully_saturated_gas_square_1x1_quad8_1e2_bottom_ts_0_t_0.000000.vtu create mode 100644 Tests/Data/TH2M/HM/empty_variables_flow_fully_saturated_gas_square_1x1_quad8_1e2_bottom_ts_1_t_1.000000.vtu create mode 100644 Tests/Data/TH2M/HM/empty_variables_flow_fully_saturated_gas_square_1x1_quad8_1e2_bottom_ts_2_t_2.000000.vtu create mode 100644 Tests/Data/TH2M/HM/flow_fully_saturated_gas_square_1x1_quad8_1e2_bottom_ts_0_t_0.000000.vtu create mode 100644 Tests/Data/TH2M/HM/flow_fully_saturated_gas_square_1x1_quad8_1e2_bottom_ts_1_t_1.000000.vtu create mode 100644 Tests/Data/TH2M/HM/flow_fully_saturated_gas_square_1x1_quad8_1e2_bottom_ts_2_t_2.000000.vtu diff --git a/Tests/Data/TH2M/HM/empty_variables_flow_fully_saturated_gas_square_1x1_quad8_1e2_bottom_ts_0_t_0.000000.vtu b/Tests/Data/TH2M/HM/empty_variables_flow_fully_saturated_gas_square_1x1_quad8_1e2_bottom_ts_0_t_0.000000.vtu new file mode 100644 index 00000000000..72639127d7e --- /dev/null +++ b/Tests/Data/TH2M/HM/empty_variables_flow_fully_saturated_gas_square_1x1_quad8_1e2_bottom_ts_0_t_0.000000.vtu @@ -0,0 +1,48 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + 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+ + diff --git a/Tests/Data/TH2M/HM/flow_fully_saturated_gas.prj b/Tests/Data/TH2M/HM/flow_fully_saturated_gas.prj index b5dbc9a9266..c5d87805a7f 100644 --- a/Tests/Data/TH2M/HM/flow_fully_saturated_gas.prj +++ b/Tests/Data/TH2M/HM/flow_fully_saturated_gas.prj @@ -228,39 +228,95 @@ - - VTK - flow_fully_saturated_gas - - - 10000 - 1 - - - - gas_pressure - gas_pressure_interpolated - capillary_pressure - capillary_pressure_interpolated - temperature - temperature_interpolated - displacement - sigma - epsilon - velocity_gas - velocity_liquid - liquid_density - gas_density - porosity - saturation - GasMassFlowRate - HeatFlowRate - LiquidMassFlowRate - NodalForces - liquid_pressure_interpolated - - _ts_{:timestep}_t_{:time} - + + + VTK + flow_fully_saturated_gas + _ts_{:timestep}_t_{:time} + + + 10000 + 1 + + + + gas_pressure + gas_pressure_interpolated + capillary_pressure + capillary_pressure_interpolated + temperature + temperature_interpolated + displacement + sigma + epsilon + velocity_gas + velocity_liquid + liquid_density + gas_density + porosity + saturation + GasMassFlowRate + HeatFlowRate + LiquidMassFlowRate + NodalForces + liquid_pressure_interpolated + + + + + VTK + flow_fully_saturated_gas_{:meshname} + + + 10000 + 1 + + + + square_1x1_quad8_1e2_bottom + + + gas_pressure + gas_pressure_interpolated + capillary_pressure + capillary_pressure_interpolated + temperature + temperature_interpolated + displacement + sigma + epsilon + velocity_gas + velocity_liquid + liquid_density + gas_density + porosity + saturation + GasMassFlowRate + HeatFlowRate + LiquidMassFlowRate + NodalForces + liquid_pressure_interpolated + + _ts_{:timestep}_t_{:time} + + + + VTK + empty_variables_flow_fully_saturated_gas_{:meshname} + _ts_{:timestep}_t_{:time} + + + 10000 + 1 + + + + square_1x1_quad8_1e2_bottom + + + + + @@ -502,5 +558,29 @@ 1e-15 0 + + flow_fully_saturated_gas_square_1x1_quad8_1e2_bottom_ts_.*.vtu + gas_pressure + 2e-15 + 2e-15 + + + 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+ + From bbaad98764d2b0d079a167671ee6e37e0c56dedd Mon Sep 17 00:00:00 2001 From: Thomas Fischer Date: Thu, 7 Sep 2023 11:26:24 +0200 Subject: [PATCH 3/4] [PL/Output] Check result of dof index calculation --- ProcessLib/Output/AddProcessDataToMesh.cpp | 8 ++++++++ 1 file changed, 8 insertions(+) diff --git a/ProcessLib/Output/AddProcessDataToMesh.cpp b/ProcessLib/Output/AddProcessDataToMesh.cpp index 13a57345f44..d9e23519af6 100644 --- a/ProcessLib/Output/AddProcessDataToMesh.cpp +++ b/ProcessLib/Output/AddProcessDataToMesh.cpp @@ -326,6 +326,14 @@ static std::set addPrimaryVariablesToMesh( // per node ordering of components auto const out_index = node_id * n_components + component_id; + // request for index of linear quantities at higher order nodes + // results in returning NumLib::MeshComponentMap::nop + if (in_index == NumLib::MeshComponentMap::nop) + { + output_data[out_index] = 0; + continue; + } + output_data[out_index] = x_copy[in_index]; } } From 8fd030d03e70b421d7aeb7efac0dff5bf05b8c90 Mon Sep 17 00:00:00 2001 From: Thomas Fischer Date: Tue, 12 Sep 2023 10:34:01 +0200 Subject: [PATCH 4/4] [T] Test output also with Newton version of TH2M/HM/flow_fully_saturated_gas --- ...uad8_1e2_bottom_newton_ts_0_t_0.000000.vtu | 48 +++++++++++++++++++ ...uad8_1e2_bottom_newton_ts_1_t_1.000000.vtu | 48 +++++++++++++++++++ ...uad8_1e2_bottom_newton_ts_2_t_2.000000.vtu | 48 +++++++++++++++++++ .../HM/flow_fully_saturated_gas_newton.xml | 10 +++- ...uad8_1e2_bottom_newton_ts_0_t_0.000000.vtu | 45 +++++++++++++++++ ...uad8_1e2_bottom_newton_ts_1_t_1.000000.vtu | 45 +++++++++++++++++ ...uad8_1e2_bottom_newton_ts_2_t_2.000000.vtu | 45 +++++++++++++++++ 7 files changed, 288 insertions(+), 1 deletion(-) create mode 100644 Tests/Data/TH2M/HM/empty_variables_flow_fully_saturated_gas_square_1x1_quad8_1e2_bottom_newton_ts_0_t_0.000000.vtu create mode 100644 Tests/Data/TH2M/HM/empty_variables_flow_fully_saturated_gas_square_1x1_quad8_1e2_bottom_newton_ts_1_t_1.000000.vtu create mode 100644 Tests/Data/TH2M/HM/empty_variables_flow_fully_saturated_gas_square_1x1_quad8_1e2_bottom_newton_ts_2_t_2.000000.vtu create mode 100644 Tests/Data/TH2M/HM/flow_fully_saturated_gas_square_1x1_quad8_1e2_bottom_newton_ts_0_t_0.000000.vtu create mode 100644 Tests/Data/TH2M/HM/flow_fully_saturated_gas_square_1x1_quad8_1e2_bottom_newton_ts_1_t_1.000000.vtu create mode 100644 Tests/Data/TH2M/HM/flow_fully_saturated_gas_square_1x1_quad8_1e2_bottom_newton_ts_2_t_2.000000.vtu diff --git a/Tests/Data/TH2M/HM/empty_variables_flow_fully_saturated_gas_square_1x1_quad8_1e2_bottom_newton_ts_0_t_0.000000.vtu b/Tests/Data/TH2M/HM/empty_variables_flow_fully_saturated_gas_square_1x1_quad8_1e2_bottom_newton_ts_0_t_0.000000.vtu new file mode 100644 index 00000000000..3cfb02b2615 --- /dev/null +++ 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+ + diff --git a/Tests/Data/TH2M/HM/flow_fully_saturated_gas_newton.xml b/Tests/Data/TH2M/HM/flow_fully_saturated_gas_newton.xml index 75624834159..bc4c813665b 100644 --- a/Tests/Data/TH2M/HM/flow_fully_saturated_gas_newton.xml +++ b/Tests/Data/TH2M/HM/flow_fully_saturated_gas_newton.xml @@ -1,6 +1,14 @@ - flow_fully_saturated_gas_newton + flow_fully_saturated_gas_newton + flow_fully_saturated_gas_{:meshname}_newton + empty_variables_flow_fully_saturated_gas_{:meshname}_newton + flow_fully_saturated_gas_newton_ts_.*.vtu + + flow_fully_saturated_gas_square_1x1_quad8_1e2_bottom_newton_ts_.*.vtu + flow_fully_saturated_gas_square_1x1_quad8_1e2_bottom_newton_ts_.*.vtu + empty_variables_flow_fully_saturated_gas_square_1x1_quad8_1e2_bottom_newton_ts_.*.vtu + empty_variables_flow_fully_saturated_gas_square_1x1_quad8_1e2_bottom_newton_ts_.*.vtu diff --git a/Tests/Data/TH2M/HM/flow_fully_saturated_gas_square_1x1_quad8_1e2_bottom_newton_ts_0_t_0.000000.vtu 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