New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Parameterize `--VALIDATION_STRINGENCY` #224

Open

tyamaguchi-ucla opened this issue Jul 24, 2022 · 0 comments

Assignees

Labels

enhancement Task

Contributor

tyamaguchi-ucla commented Jul 24, 2022

The command is currently hard-coded.

pipeline-align-DNA/module/mark_duplicates_spark.nf

Line 78 in acf77d9

--read-validation-stringency LENIENT \

tyamaguchi-ucla assigned jarbet

tyamaguchi-ucla added enhancement Task labels

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment