paper.tex

% latex options
\input{paper.preamble}

\begin{document}
\input{00-header-footer}

\input{00-title-abstract}
\input{01-introduction}
\input{02-headings}
\input{03-format}
\input{04-submission}
\input{05-conclusions}

\small
\input{96-nomenclature}
\input{97-references}
% or
% \printbibliography[title=REFERENCES]
\input{98-acknowledgements}

% appendix
%\clearpage
%\appendix
%\counterwithin{figure}{section}
%\counterwithin{table}{section}
%\counterwithin{equation}{section}
%\input{99-appendix}

\end{document}