requirements.txt

# This file was autogenerated by uv via the following command:
#    uv pip compile pyproject.toml -p 3.11 -o requirements.txt
acres==0.1.0
    # via niworkflows (pyproject.toml)
astor==0.8.1
    # via formulaic
attrs==24.2.0
    # via
    #   niworkflows (pyproject.toml)
    #   jsonschema
    #   referencing
bids-validator==1.14.7.post0
    # via pybids
bidsschematools==0.11.3
    # via bids-validator
certifi==2024.8.30
    # via requests
charset-normalizer==3.4.0
    # via requests
ci-info==0.3.0
    # via etelemetry
click==8.1.7
    # via
    #   bidsschematools
    #   nipype
    #   pybids
contourpy==1.3.0
    # via matplotlib
cycler==0.12.1
    # via matplotlib
docopt==0.6.2
    # via num2words
etelemetry==0.3.1
    # via nipype
filelock==3.16.1
    # via nipype
fonttools==4.54.1
    # via matplotlib
formulaic==0.5.2
    # via pybids
fsspec==2024.10.0
    # via universal-pathlib
greenlet==3.1.1
    # via sqlalchemy
h5py==3.12.1
    # via nitransforms
idna==3.10
    # via requests
imageio==2.36.0
    # via scikit-image
importlib-resources==6.4.5
    # via nibabel
interface-meta==1.3.0
    # via formulaic
isodate==0.6.1
    # via rdflib
jinja2==3.1.4
    # via niworkflows (pyproject.toml)
joblib==1.4.2
    # via
    #   nilearn
    #   scikit-learn
jsonschema==4.23.0
    # via bidsschematools
jsonschema-specifications==2024.10.1
    # via jsonschema
kiwisolver==1.4.7
    # via matplotlib
lazy-loader==0.4
    # via scikit-image
looseversion==1.3.0
    # via
    #   niworkflows (pyproject.toml)
    #   nipype
lxml==5.3.0
    # via
    #   nilearn
    #   prov
    #   svgutils
markupsafe==3.0.2
    # via jinja2
matplotlib==3.9.2
    # via
    #   niworkflows (pyproject.toml)
    #   seaborn
networkx==3.4.2
    # via
    #   nipype
    #   prov
    #   scikit-image
nibabel==5.3.2
    # via
    #   niworkflows (pyproject.toml)
    #   nilearn
    #   nipype
    #   nitransforms
    #   pybids
nilearn==0.10.4
    # via niworkflows (pyproject.toml)
nipype==1.9.0
    # via niworkflows (pyproject.toml)
nitransforms==24.0.2
    # via niworkflows (pyproject.toml)
num2words==0.5.13
    # via pybids
numpy==1.26.4
    # via
    #   niworkflows (pyproject.toml)
    #   contourpy
    #   formulaic
    #   h5py
    #   imageio
    #   matplotlib
    #   nibabel
    #   nilearn
    #   nipype
    #   nitransforms
    #   pandas
    #   pybids
    #   scikit-image
    #   scikit-learn
    #   scipy
    #   seaborn
    #   tifffile
    #   transforms3d
packaging==24.1
    # via
    #   niworkflows (pyproject.toml)
    #   etelemetry
    #   lazy-loader
    #   matplotlib
    #   nibabel
    #   nilearn
    #   nipype
    #   scikit-image
pandas==2.2.3
    # via
    #   niworkflows (pyproject.toml)
    #   formulaic
    #   nilearn
    #   pybids
    #   seaborn
pillow==11.0.0
    # via
    #   imageio
    #   matplotlib
    #   scikit-image
prov==2.0.1
    # via nipype
puremagic==1.28
    # via nipype
pybids==0.17.2
    # via
    #   niworkflows (pyproject.toml)
    #   templateflow
pydot==3.0.2
    # via nipype
pyparsing==3.2.0
    # via
    #   matplotlib
    #   pydot
    #   rdflib
python-dateutil==2.9.0.post0
    # via
    #   matplotlib
    #   nipype
    #   pandas
    #   prov
pytz==2024.2
    # via pandas
pyyaml==6.0.2
    # via
    #   niworkflows (pyproject.toml)
    #   bidsschematools
rdflib==6.3.2
    # via
    #   nipype
    #   prov
referencing==0.35.1
    # via
    #   jsonschema
    #   jsonschema-specifications
requests==2.32.3
    # via
    #   etelemetry
    #   nilearn
    #   templateflow
rpds-py==0.20.1
    # via
    #   jsonschema
    #   referencing
scikit-image==0.24.0
    # via niworkflows (pyproject.toml)
scikit-learn==1.5.2
    # via nilearn
scipy==1.14.1
    # via
    #   niworkflows (pyproject.toml)
    #   formulaic
    #   nilearn
    #   nipype
    #   nitransforms
    #   pybids
    #   scikit-image
    #   scikit-learn
seaborn==0.13.2
    # via niworkflows (pyproject.toml)
simplejson==3.19.3
    # via nipype
six==1.16.0
    # via
    #   isodate
    #   python-dateutil
sqlalchemy==2.0.36
    # via pybids
svgutils==0.3.4
    # via niworkflows (pyproject.toml)
templateflow==24.2.2
    # via niworkflows (pyproject.toml)
threadpoolctl==3.5.0
    # via scikit-learn
tifffile==2024.9.20
    # via scikit-image
tqdm==4.66.6
    # via templateflow
traits==6.4.3
    # via nipype
transforms3d==0.4.2
    # via niworkflows (pyproject.toml)
typing-extensions==4.12.2
    # via
    #   formulaic
    #   nibabel
    #   sqlalchemy
tzdata==2024.2
    # via pandas
universal-pathlib==0.2.5
    # via pybids
urllib3==2.2.3
    # via requests
wrapt==1.16.0
    # via formulaic