From 55ef924217ad8bfdad4cfd317aa0c3859d851ad7 Mon Sep 17 00:00:00 2001
From: Thomas Roh <thmsroh@gmail.com>
Date: Sun, 20 Feb 2022 13:40:32 -0800
Subject: [PATCH] updating docs

---
 docs/index.html  | 48 +++++++++++++++---------------------------------
 docs/pkgdown.yml |  2 +-
 2 files changed, 16 insertions(+), 34 deletions(-)
diff --git a/docs/index.html b/docs/index.html
index f5d8d0e..0d252e9 100644
--- a/docs/index.html
+++ b/docs/index.html
@@ -26,8 +26,20 @@
 <![endif]-->
 </head>
 <body data-spy="scroll" data-target="#toc">
-
-
+    
+
+    <div class="container template-home">
+      <header><div class="navbar navbar-default navbar-fixed-top" role="navigation">
+  <div class="container">
+    <div class="navbar-header">
+      <button type="button" class="navbar-toggle collapsed" data-toggle="collapse" data-target="#navbar" aria-expanded="false">
+        <span class="sr-only">Toggle navigation</span>
+        <span class="icon-bar"></span>
+        <span class="icon-bar"></span>
+        <span class="icon-bar"></span>
+      </button>
+      <span class="navbar-brand">
+        <a class="navbar-link" href="index.html">bcputility</a>
         <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="">0.3.0</span>
       </span>
     </div>
@@ -35,7 +47,6 @@
     <div id="navbar" class="navbar-collapse collapse">
       <ul class="nav navbar-nav">
 <li>
-
   <a href="reference/index.html">Reference</a>
 </li>
 <li>
@@ -44,9 +55,7 @@
       </ul>
 <ul class="nav navbar-nav navbar-right">
 <li>
-
   <a href="https://github.com/tomroh/bcputility/" class="external-link">
-
     <span class="fab fa-github fa-lg"></span>
      
   </a>
@@ -106,7 +115,6 @@ <h3 id="import">Import<a class="anchor" aria-label="anchor" href="#import"></a>
                       Server <span class="op">=</span> <span class="va">server</span>,
                       Database <span class="op">=</span> <span class="va">database</span><span class="op">)</span>
 <span class="va">results</span> <span class="op">&lt;-</span> <span class="fu">microbenchmark</span><span class="fu">::</span><span class="fu"><a href="https://rdrr.io/pkg/microbenchmark/man/microbenchmark.html" class="external-link">microbenchmark</a></span><span class="op">(</span>
-
   bcpImport1000 <span class="op">=</span> <span class="op">{</span>
     <span class="fu"><a href="reference/bcpImport.html">bcpImport</a></span><span class="op">(</span><span class="va">flights</span>,
               server <span class="op">=</span> <span class="va">server</span>,
@@ -135,7 +143,6 @@ <h3 id="import">Import<a class="anchor" aria-label="anchor" href="#import"></a>
   <span class="op">}</span>,
   dbWriteTable <span class="op">=</span> <span class="op">{</span>
     <span class="fu">DBI</span><span class="fu">::</span><span class="fu"><a href="https://dbi.r-dbi.org/reference/dbWriteTable.html" class="external-link">dbWriteTable</a></span><span class="op">(</span><span class="va">con</span>, name <span class="op">=</span> <span class="st">'flights4'</span>, <span class="va">flights</span>, overwrite <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span>
-
     <span class="op">}</span>,
   times <span class="op">=</span> <span class="fl">30L</span>
 <span class="op">)</span></code></pre></div>
@@ -195,14 +202,12 @@ <h3 id="import">Import<a class="anchor" aria-label="anchor" href="#import"></a>
 </table>
 <p><em>Time in seconds</em></p>
 </div>
-
 <div class="section level3">
 <h3 id="export-table">Export Table<a class="anchor" aria-label="anchor" href="#export-table"></a>
 </h3>
 <p><strong>Note:</strong> <em>bcp</em> exports of data may not match the format of <code>fwrite</code>. <code>dateTimeAs = 'write.csv'</code> was used to make timings comparable, which decreased the performance of “<a href="https://rdatatable.gitlab.io/data.table/" class="external-link">data.table</a>”. Optimized write formats for date times from <code>fwrite</code> outperforms <em>bcp</em> for data that is small enough to be pulled into memory.</p>
 <div class="sourceCode" id="cb5"><pre class="downlit sourceCode r">
 <code class="sourceCode R"><span class="va">exportResults</span> <span class="op">&lt;-</span> <span class="fu">microbenchmark</span><span class="fu">::</span><span class="fu"><a href="https://rdrr.io/pkg/microbenchmark/man/microbenchmark.html" class="external-link">microbenchmark</a></span><span class="op">(</span>
-
   bcpExportChar <span class="op">=</span> <span class="op">{</span>
     <span class="fu"><a href="reference/bcpExport.html">bcpExport</a></span><span class="op">(</span><span class="st">'test1.csv'</span>,
               server <span class="op">=</span> <span class="va">server</span>,
@@ -222,9 +227,7 @@ <h3 id="export-table">Export Table<a class="anchor" aria-label="anchor" href="#e
               datatypes <span class="op">=</span> <span class="st">'nchar'</span><span class="op">)</span>
   <span class="op">}</span>,
   fwriteQuery <span class="op">=</span> <span class="op">{</span>
-
     <span class="fu"><a href="https://Rdatatable.gitlab.io/data.table/reference/fwrite.html" class="external-link">fwrite</a></span><span class="op">(</span><span class="fu">DBI</span><span class="fu">::</span><span class="fu"><a href="https://dbi.r-dbi.org/reference/dbReadTable.html" class="external-link">dbReadTable</a></span><span class="op">(</span><span class="va">con</span>, <span class="st">'flights1'</span><span class="op">)</span>,
-
            <span class="st">'test3.csv'</span>, dateTimeAs <span class="op">=</span> <span class="st">'write.csv'</span>,
            col.names <span class="op">=</span> <span class="cn">FALSE</span><span class="op">)</span>
   <span class="op">}</span>,
@@ -276,13 +279,11 @@ <h3 id="export-table">Export Table<a class="anchor" aria-label="anchor" href="#e
 </table>
 <p><em>Time in seconds</em></p>
 </div>
-
 <div class="section level3">
 <h3 id="export-query">Export Query<a class="anchor" aria-label="anchor" href="#export-query"></a>
 </h3>
 <div class="sourceCode" id="cb6"><pre class="downlit sourceCode r">
 <code class="sourceCode R"><span class="va">queryResults</span> <span class="op">&lt;-</span> <span class="fu">microbenchmark</span><span class="fu">::</span><span class="fu"><a href="https://rdrr.io/pkg/microbenchmark/man/microbenchmark.html" class="external-link">microbenchmark</a></span><span class="op">(</span>
-
   bcpExportQueryChar <span class="op">=</span> <span class="op">{</span>
     <span class="fu"><a href="reference/bcpExport.html">bcpExport</a></span><span class="op">(</span><span class="st">'test4.csv'</span>,
               server <span class="op">=</span> <span class="va">server</span>,
@@ -302,9 +303,7 @@ <h3 id="export-query">Export Query<a class="anchor" aria-label="anchor" href="#e
               datatypes <span class="op">=</span> <span class="st">'nchar'</span><span class="op">)</span>
   <span class="op">}</span>,
   fwriteQuery <span class="op">=</span> <span class="op">{</span>
-
     <span class="fu"><a href="https://Rdatatable.gitlab.io/data.table/reference/fwrite.html" class="external-link">fwrite</a></span><span class="op">(</span><span class="fu">DBI</span><span class="fu">::</span><span class="fu"><a href="https://dbi.r-dbi.org/reference/dbGetQuery.html" class="external-link">dbGetQuery</a></span><span class="op">(</span><span class="va">con</span>, <span class="va">query</span><span class="op">)</span>,
-
            <span class="st">'test6.csv'</span>, dateTimeAs <span class="op">=</span> <span class="st">'write.csv'</span>,
            col.names <span class="op">=</span> <span class="cn">FALSE</span><span class="op">)</span>
   <span class="op">}</span>,
@@ -356,7 +355,6 @@ <h3 id="export-query">Export Query<a class="anchor" aria-label="anchor" href="#e
 </table>
 <p><em>Time in seconds</em></p>
 </div>
-
 <div class="section level3">
 <h3 id="import-geometry">Import Geometry<a class="anchor" aria-label="anchor" href="#import-geometry"></a>
 </h3>
@@ -366,7 +364,6 @@ <h3 id="import-geometry">Import Geometry<a class="anchor" aria-label="anchor" hr
 <span class="va">nc</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://r-spatial.github.io/sf/reference/st_read.html" class="external-link">st_read</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/system.file.html" class="external-link">system.file</a></span><span class="op">(</span><span class="st">"gpkg/nc.gpkg"</span>, package <span class="op">=</span> <span class="st">"sf"</span><span class="op">)</span><span class="op">)</span>
 <span class="va">nc</span> <span class="op">&lt;-</span> <span class="va">nc</span><span class="op">[</span><span class="fu"><a href="https://rdrr.io/r/base/sample.html" class="external-link">sample.int</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/nrow.html" class="external-link">nrow</a></span><span class="op">(</span><span class="va">nc</span><span class="op">)</span>, <span class="fl">10000</span>, replace <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span>,<span class="op">]</span>
 <span class="fu">microbenchmark</span><span class="fu">::</span><span class="fu"><a href="https://rdrr.io/pkg/microbenchmark/man/microbenchmark.html" class="external-link">microbenchmark</a></span><span class="op">(</span>
-
   bcpImportGeometry <span class="op">=</span> <span class="op">{</span>
     <span class="fu"><a href="reference/bcpImport.html">bcpImport</a></span><span class="op">(</span><span class="va">nc</span>,
               server <span class="op">=</span> <span class="va">server</span>,
@@ -374,24 +371,20 @@ <h3 id="import-geometry">Import Geometry<a class="anchor" aria-label="anchor" hr
               table <span class="op">=</span> <span class="st">'nc1'</span>,
               overwrite <span class="op">=</span> <span class="cn">TRUE</span>,
               stdout <span class="op">=</span> <span class="cn">FALSE</span><span class="op">)</span>
-
     <span class="va">con</span> <span class="op">&lt;-</span> <span class="fu">DBI</span><span class="fu">::</span><span class="fu"><a href="https://dbi.r-dbi.org/reference/dbConnect.html" class="external-link">dbConnect</a></span><span class="op">(</span><span class="fu">odbc</span><span class="fu">::</span><span class="fu"><a href="https://rdrr.io/pkg/odbc/man/odbc.html" class="external-link">odbc</a></span><span class="op">(</span><span class="op">)</span>,
                           driver <span class="op">=</span> <span class="st">'SQL Server'</span>,
                           server <span class="op">=</span> <span class="va">server</span>,
                           database <span class="op">=</span> <span class="va">database</span><span class="op">)</span>
     <span class="va">sql</span> <span class="op">&lt;-</span> <span class="fu">DBI</span><span class="fu">::</span><span class="fu"><a href="https://dbi.r-dbi.org/reference/sqlInterpolate.html" class="external-link">sqlInterpolate</a></span><span class="op">(</span>
-
       <span class="va">con</span>,
       <span class="st">'alter table dbo.nc1 add ObjectID integer primary key identity(1,1);
        create spatial index nc1_spix on nc1(geom)
        with ( bounding_box = ( ?xmin, ?ymin, ?xmax, ?ymax ),
               grids = (medium, medium, medium, medium),
               cells_per_object = 16);'</span>,
-
       .dots <span class="op">=</span> <span class="fu"><a href="https://r-spatial.github.io/sf/reference/st_bbox.html" class="external-link">st_bbox</a></span><span class="op">(</span><span class="va">nc</span><span class="op">)</span>
     <span class="op">)</span>
     <span class="fu">DBI</span><span class="fu">::</span><span class="fu"><a href="https://dbi.r-dbi.org/reference/dbExecute.html" class="external-link">dbExecute</a></span><span class="op">(</span><span class="va">con</span>, <span class="va">sql</span><span class="op">)</span>
-
   <span class="op">}</span>,
   bcpImportGeography <span class="op">=</span> <span class="op">{</span>
     <span class="fu"><a href="reference/bcpImport.html">bcpImport</a></span><span class="op">(</span><span class="va">nc</span>,
@@ -401,9 +394,7 @@ <h3 id="import-geometry">Import Geometry<a class="anchor" aria-label="anchor" hr
               overwrite <span class="op">=</span> <span class="cn">TRUE</span>,
               stdout <span class="op">=</span> <span class="cn">FALSE</span>,
               spatialtype <span class="op">=</span> <span class="st">'geography'</span><span class="op">)</span>
-
     <span class="va">con</span> <span class="op">&lt;-</span> <span class="fu">DBI</span><span class="fu">::</span><span class="fu"><a href="https://dbi.r-dbi.org/reference/dbConnect.html" class="external-link">dbConnect</a></span><span class="op">(</span><span class="fu">odbc</span><span class="fu">::</span><span class="fu"><a href="https://rdrr.io/pkg/odbc/man/odbc.html" class="external-link">odbc</a></span><span class="op">(</span><span class="op">)</span>,
-
                           driver <span class="op">=</span> <span class="st">'SQL Server'</span>,
                           server <span class="op">=</span> <span class="va">server</span>,
                           database <span class="op">=</span> <span class="va">database</span><span class="op">)</span>
@@ -412,7 +403,6 @@ <h3 id="import-geometry">Import Geometry<a class="anchor" aria-label="anchor" hr
             using geography_grid
             with ( grids = (medium, medium, medium, medium),
                    cells_per_object = 16);'</span>
-
     <span class="fu">DBI</span><span class="fu">::</span><span class="fu"><a href="https://dbi.r-dbi.org/reference/dbExecute.html" class="external-link">dbExecute</a></span><span class="op">(</span><span class="va">con</span>, <span class="va">sql</span><span class="op">)</span>
   <span class="op">}</span>,
   stWriteGeometry <span class="op">=</span> <span class="op">{</span>
@@ -429,12 +419,10 @@ <h3 id="import-geometry">Import Geometry<a class="anchor" aria-label="anchor" hr
                           server <span class="op">=</span> <span class="va">server</span>,
                           database <span class="op">=</span> <span class="va">database</span><span class="op">)</span>
     <span class="fu">DBI</span><span class="fu">::</span><span class="fu"><a href="https://dbi.r-dbi.org/reference/dbExecute.html" class="external-link">dbExecute</a></span><span class="op">(</span><span class="va">con</span>,
-
                    <span class="st">'alter table dbo.nc3 alter column [NAME] varchar(255);
                     alter table dbo.nc3 alter column [FIPS] varchar(255);'</span><span class="op">)</span>
     <span class="op">}</span>,
   stWriteGeography <span class="op">=</span> <span class="op">{</span>
-
     <span class="fu"><a href="https://rdrr.io/r/base/Sys.setenv.html" class="external-link">Sys.setenv</a></span><span class="op">(</span><span class="st">'MSSQLSPATIAL_USE_GEOMETRY_COLUMNS'</span> <span class="op">=</span> <span class="st">'NO'</span><span class="op">)</span>
     <span class="fu"><a href="https://r-spatial.github.io/sf/reference/st_write.html" class="external-link">st_write</a></span><span class="op">(</span><span class="va">nc</span>,
              <span class="fu"><a href="https://rdrr.io/r/base/sprintf.html" class="external-link">sprintf</a></span><span class="op">(</span><span class="st">r'(MSSQL:Server=%s;Database=%s;Trusted_Connection=True;)'</span>,
@@ -448,7 +436,6 @@ <h3 id="import-geometry">Import Geometry<a class="anchor" aria-label="anchor" hr
                           server <span class="op">=</span> <span class="va">server</span>,
                           database <span class="op">=</span> <span class="va">database</span><span class="op">)</span>
     <span class="fu">DBI</span><span class="fu">::</span><span class="fu"><a href="https://dbi.r-dbi.org/reference/dbExecute.html" class="external-link">dbExecute</a></span><span class="op">(</span><span class="va">con</span>,
-
                    <span class="st">'alter table dbo.nc4 alter column [NAME] varchar(255);
                     alter table dbo.nc4 alter column [FIPS] varchar(255);
                     update dbo.nc4 SET geom = geom.MakeValid().ReorientObject()
@@ -518,7 +505,6 @@ <h3 id="import-geometry">Import Geometry<a class="anchor" aria-label="anchor" hr
 
   <div class="col-md-3 hidden-xs hidden-sm" id="pkgdown-sidebar">
     <div class="links">
-
 <h2 data-toc-skip>Links</h2>
 <ul class="list-unstyled">
 <li><a href="https://cloud.r-project.org/package=bcputility" class="external-link">View on CRAN</a></li>
@@ -553,7 +539,6 @@ <h2 data-toc-skip>Developers</h2>
 
 <div class="dev-status">
 <h2 data-toc-skip>Dev status</h2>
-
 <ul class="list-unstyled">
 <li><a href="https://CRAN.R-project.org/package=bcputility" class="external-link"><img src="https://www.r-pkg.org/badges/version/bcputility" alt="CRAN status"></a></li>
 <li><a href="https://github.com/tomroh/bcputility/actions" class="external-link"><img src="https://github.com/tomroh/bcputility/workflows/R-CMD-check/badge.svg" alt="R-CMD-check"></a></li>
@@ -562,14 +547,11 @@ <h2 data-toc-skip>Dev status</h2>
 </ul>
 </div>
 
-
   </div>
-
 </div>
 
 
       <footer><div class="copyright">
-
   <p></p>
 <p>Developed by <a href="https://roh.engineering/about" class="external-link">Thomas Roh</a>.</p>
 </div>
@@ -577,7 +559,6 @@ <h2 data-toc-skip>Dev status</h2>
 <div class="pkgdown">
   <p></p>
 <p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.1.</p>
-
 </div>
 
       </footer>
@@ -586,6 +567,7 @@ <h2 data-toc-skip>Dev status</h2>
   
 
 
+  
 
   </body>
 </html>
diff --git a/docs/pkgdown.yml b/docs/pkgdown.yml
index 44b4be0..c210c33 100644
--- a/docs/pkgdown.yml
+++ b/docs/pkgdown.yml
@@ -2,7 +2,7 @@ pandoc: 2.14.0.3
 pkgdown: 2.0.1
 pkgdown_sha: ~
 articles: {}
-last_built: 2022-02-20T19:24Z
+last_built: 2022-02-20T21:39Z
 urls:
   reference: https://bcputility.roh.engineering/reference
   article: https://bcputility.roh.engineering/articles
