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Supply known editing sites tab file #4

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bardriel opened this issue Jan 22, 2021 · 1 comment
Open

Supply known editing sites tab file #4

bardriel opened this issue Jan 22, 2021 · 1 comment

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@bardriel
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Hello,
I am trying REDItools2.0 to perform AtoI editing analysis on several RNA-seq datasets. After checking the manual I did not found any option to provide a tab file with known editing sites (in REDItools 1.2.1 there was an option, running "REDItoolKnown", to provide a tab file with these sites, making the software to only check those sites). Is there any option to provide these tab file with known sites?
Thanks in advance.

@YiweiNiu
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Hi, I also want to do the same thing. I wonder if the parameter -B BED_FILE, --bed_file BED_FILE Path of BED file containing target regions could solve this problem.

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