From 9dc22304f9a3cdbbc350d423c430652e83219e8b Mon Sep 17 00:00:00 2001 From: kevinlibuit Date: Tue, 30 Mar 2021 13:22:30 +0000 Subject: [PATCH] add pango lineage reporrt to output --- workflows/wf_titan_clearlabs.wdl | 1 + workflows/wf_titan_illumina_pe.wdl | 1 + 2 files changed, 2 insertions(+) diff --git a/workflows/wf_titan_clearlabs.wdl b/workflows/wf_titan_clearlabs.wdl index f5fe44e4..5715a698 100644 --- a/workflows/wf_titan_clearlabs.wdl +++ b/workflows/wf_titan_clearlabs.wdl @@ -96,6 +96,7 @@ workflow titan_clearlabs { String pango_lineage = pangolin2.pangolin_lineage Float pangolin_aLRT = pangolin2.pangolin_aLRT String pangolin_version = pangolin2.version + File pango_lineage_report = pangolin2.pango_lineage_report String pangolin_docker = pangolin2.pangolin_docker File nextclade_json = nextclade_one_sample.nextclade_json diff --git a/workflows/wf_titan_illumina_pe.wdl b/workflows/wf_titan_illumina_pe.wdl index bf55103c..8e40118e 100644 --- a/workflows/wf_titan_illumina_pe.wdl +++ b/workflows/wf_titan_illumina_pe.wdl @@ -134,6 +134,7 @@ workflow titan_illumina_pe { String pango_lineage = pangolin2.pangolin_lineage Float pangolin_aLRT = pangolin2.pangolin_aLRT String pangolin_version = pangolin2.version + File pango_lineage_report = pangolin2.pango_lineage_report String pangolin_docker = pangolin2.pangolin_docker File nextclade_json = nextclade_one_sample.nextclade_json