diff --git a/tasks/utilities/data_handling/task_fetch_srr_accession.wdl b/tasks/utilities/data_handling/task_fetch_srr_accession.wdl index 7b3635a14..2c469f6e6 100644 --- a/tasks/utilities/data_handling/task_fetch_srr_accession.wdl +++ b/tasks/utilities/data_handling/task_fetch_srr_accession.wdl @@ -13,6 +13,8 @@ task fetch_srr_accession { } command <<< + set -euo pipefail + # Output the current date and fastq-dl version for debugging date -u | tee DATE fastq-dl --version | tee VERSION