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I oftentimes have to dig deep into the execution directories to find the fastq-scan output JSON to see mean and median read lengths
It would be nice to float the mean and median read lengths to 2 output columns.
Additionally output the JSON as a 3rd new column.
The average/mean read length is available in the cg_pipeline output TSV, which is an output column, but you have to download the file to view for each sample (bit of a pain)
The text was updated successfully, but these errors were encountered:
I oftentimes have to dig deep into the execution directories to find the fastq-scan output JSON to see mean and median read lengths
It would be nice to float the mean and median read lengths to 2 output columns.
Additionally output the JSON as a 3rd new column.
The average/mean read length is available in the cg_pipeline output TSV, which is an output column, but you have to download the file to view for each sample (bit of a pain)
The text was updated successfully, but these errors were encountered: