From 91d74a9ebe47b78237751cecd842c9264e1ff1bc Mon Sep 17 00:00:00 2001 From: Ayo Ayibiowu Date: Mon, 11 Nov 2024 11:48:26 +0100 Subject: [PATCH 1/3] chore: update packages are migrate reranker to litellm Update various packages to the latest ones - crewai, langchain, chainlit (1.3.2) and remove langchain-cohere deps Adds support for using litellm provided reranker configuration --- docs/configuration.md | 8 + poetry.lock | 1929 +++++++---------- pyproject.toml | 12 +- sage/config.toml | 12 +- sage/sources/sources.py | 45 +- sage/utils/supports.py | 125 +- sage/validators/config_toml.py | 34 +- .../unit_tests/validators/test_config_toml.py | 95 +- 8 files changed, 994 insertions(+), 1266 deletions(-) diff --git a/docs/configuration.md b/docs/configuration.md index 7b563c4..354f5f1 100644 --- a/docs/configuration.md +++ b/docs/configuration.md @@ -212,12 +212,20 @@ paths = ["/path/to/file1", "/path/to/file2"] The [embedding] and [llm] sections configure the embedding engines and Large Language Models (LLMs) used by Sage ```toml +## LLM and ReRanker Configuration are based on LiteLLM providers - https://docs.litellm.ai/docs/providers/ [llm] model = "gpt-4-turbo" [embedding] type = "huggingface" model = "jinaai/jina-embeddings-v2-base-en" + +[reranker] +top_n = 5 +model = "cohere/rerank-english-v2.0" +#model = "BAAI/bge-reranker-large" +revision = "55611d7bca2a7133960a6d3b71e083071bbfc312" + ``` ## Environment Variables for Sensitive Credentials diff --git a/poetry.lock b/poetry.lock index 4079a23..e383414 100644 --- a/poetry.lock +++ b/poetry.lock @@ -167,13 +167,13 @@ docs = ["sphinx (==7.2.6)", "sphinx-mdinclude (==0.5.3)"] [[package]] name = "alembic" -version = "1.13.3" +version = "1.14.0" description = "A database migration tool for SQLAlchemy." optional = false python-versions = ">=3.8" files = [ - {file = "alembic-1.13.3-py3-none-any.whl", hash = "sha256:908e905976d15235fae59c9ac42c4c5b75cfcefe3d27c0fbf7ae15a37715d80e"}, - {file = "alembic-1.13.3.tar.gz", hash 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= ["pytest-mypy"] [metadata] lock-version = "2.0" python-versions = ">=3.11,<3.12" -content-hash = "26ec06b7de39f971e880a22606292358f8ef1d74d28e7c4b7c3f6358370e53dd" +content-hash = "cfe00b6d34ba6562f44c68dbb27029013371476fceffe7d23b9997e3c75e9948" diff --git a/pyproject.toml b/pyproject.toml index 5de7727..83c3b6b 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -37,13 +37,11 @@ atlassian-python-api = "^3.41.11" aiosqlite = "^0.20.0" litellm = "^1.46.0" dataclasses-json = "^0.6.7" -crewai = "^0.67.1" -cohere = "^5.6.1" -langchain = "^0.2.16" -langchain-core = "^0.2.41" -langchain-community = "^0.2.17" -langchain-cohere = "^0.1.9" -chainlit = "1.2.0" +chainlit = "1.3.2" +crewai = "^0.79.4" +langchain-core = "^0.3.15" +langchain = "^0.3.7" +langchain-community = "^0.3.5" [tool.poetry.group.tests] optional = true diff --git a/sage/config.toml b/sage/config.toml index 446a2eb..cd2aa20 100644 --- a/sage/config.toml +++ b/sage/config.toml @@ -56,16 +56,10 @@ password = "your_web_password" paths = ["/path/to/file1", "/path/to/file2"] [reranker] -type = "huggingface" top_n = 5 - -[reranker.cohere] -name = "your_cohere_reranker_name" -password = "your_cohere_password" - -[reranker.huggingface] -name = "your_huggingface_reranker_name" -revision = "your_huggingface_revision" +model = "cohere/rerank-english-v2.0" +#model = "BAAI/bge-reranker-large" +revision = "55611d7bca2a7133960a6d3b71e083071bbfc312" [embedding] type = "huggingface" diff --git a/sage/sources/sources.py b/sage/sources/sources.py index 5debc40..9fc491f 100644 --- a/sage/sources/sources.py +++ b/sage/sources/sources.py @@ -23,7 +23,7 @@ from sage.utils.exceptions import SourceException from sage.utils.labels import generate_source_label from sage.utils.supports import CustomFAISS as FAISS -from sage.utils.supports import aexecute_concurrently, asyncify +from sage.utils.supports import ReRanker, aexecute_concurrently, asyncify from sage.validators.config_toml import ConfluenceModel, Files, GitlabModel, Web @@ -240,34 +240,23 @@ def _compression_retriever( raise SourceException("There is no valid reranker configuration found") try: - if ranker_config.type == "cohere": - from langchain_cohere import CohereRerank - - _compressor = CohereRerank( - top_n=ranker_config.top_n, - model=ranker_config.cohere.name, - cohere_api_key=ranker_config.cohere.password.get_secret_value(), - user_agent=core_config.user_agent, - ) - elif ranker_config.type == "huggingface": - from sage.utils.supports import BgeRerank - - _compressor = BgeRerank( - name=ranker_config.huggingface.name, - top_n=ranker_config.top_n, - cache_dir=str(core_config.data_dir / "models"), - revision=ranker_config.huggingface.revision, - ) - else: - raise SourceException( - f"Reranker type {ranker_config.type} not supported has a valid compression retriever" - ) - except Exception as error: - raise SourceException(str(error)) + _compressor = ReRanker( + top_n=ranker_config.top_n, + model=ranker_config.model, + revision=ranker_config.revision, + cache_dir=str(core_config.data_dir / "models"), + ) + + _compression_retriever = ContextualCompressionRetriever( + base_compressor=_compressor, base_retriever=retriever + ) + except Exception as e: + logger.error( + "An error has occurred while loading the compression retriever", + exc_info=True, + ) + raise e - _compression_retriever = ContextualCompressionRetriever( - base_compressor=_compressor, base_retriever=retriever - ) return _compression_retriever ## Helper to create a retriever while the data input is a list of files path diff --git a/sage/utils/supports.py b/sage/utils/supports.py index 8e82534..87e172f 100644 --- a/sage/utils/supports.py +++ b/sage/utils/supports.py @@ -14,8 +14,9 @@ from langchain_community.docstore.base import AddableMixin from langchain_community.embeddings import HuggingFaceEmbeddings from langchain_community.vectorstores.faiss import FAISS -from litellm import aembedding, embedding +from litellm import aembedding, arerank, embedding, rerank from markdown import markdown +from pydantic import PrivateAttr, model_validator from sentence_transformers import CrossEncoder from sage.validators.config_toml import Config @@ -190,6 +191,128 @@ def compress_documents( return self._rerank(query=query, documents=documents) +class ReRanker(BaseDocumentCompressor): + """Document compressor using litellm Rerank""" + + model: str = "cohere/rerank-english-v3.0" + """Model name to use for reranking.""" + top_n: int = 10 + """Number of documents to return.""" + cache_dir: str = None + revision: str = None + provider: str = "litellm" + _hugging_reranker: BgeRerank = PrivateAttr(default=None) + + @model_validator(mode="after") + def set_provider(self) -> "ReRanker": + """Initialize huggingface reranker if applicable""" + if any(x in self.model for x in ("huggingface", "BAAI")): + self.provider = "huggingface" + self._hugging_reranker = BgeRerank( + name=self.model, + top_n=self.top_n, + cache_dir=self.cache_dir, + revision=self.revision, + ) + return self + + @staticmethod + def _parse_response( + response: list[dict], documents: Sequence[Document] + ) -> Sequence[Document]: + """Parse rerank response and attach scores to documents""" + final_results = [] + for r in response: + doc = documents[r["index"]] + doc.metadata["relevance_score"] = r["relevance_score"] + final_results.append(doc) + return final_results + + def _get_document_contents(self, documents: Sequence[Document]) -> list[str]: + """Extract page contents from documents""" + return [doc.page_content for doc in documents] + + def _rerank(self, query: str, documents: Sequence[Document]) -> Sequence[Document]: + """Rerank the documents""" + if not documents: + return [] + + if self._hugging_reranker: + result = self._hugging_reranker.compress_documents( + query=query, documents=documents + ) + return result + + response = rerank( + model=self.model, + query=query, + documents=self._get_document_contents(documents), + top_n=self.top_n, + return_documents=False, + ) + return self._parse_response(response.results, documents) + + async def _arerank( + self, query: str, documents: Sequence[Document] + ) -> Sequence[Document]: + """Rerank the documents""" + if not documents: + return [] + + if self._hugging_reranker: + result = self._hugging_reranker.compress_documents( + query=query, documents=documents + ) + return result + + response = await arerank( + model=self.model, + query=query, + documents=self._get_document_contents(documents), + top_n=self.top_n, + return_documents=False, + ) + return self._parse_response(response.results, documents) + + def compress_documents( + self, + documents: Sequence[Document], + query: str, + callbacks: Optional[Callbacks] = None, + ) -> Sequence[Document]: + """ + Compress documents. + + Args: + documents: A sequence of documents to compress. + query: The query to use for compressing the documents. + callbacks: Callbacks to run during the compression process. + + Returns: + A sequence of compressed documents. + """ + return self._rerank(query=query, documents=documents) + + async def acompress_documents( + self, + documents: Sequence[Document], + query: str, + callbacks: Optional[Callbacks] = None, + ) -> Sequence[Document]: + """ + Compress documents. + + Args: + documents: A sequence of documents to compress. + query: The query to use for compressing the documents. + callbacks: Callbacks to run during the compression process. + + Returns: + A sequence of compressed documents. + """ + return await self._arerank(query=query, documents=documents) + + def markdown_to_text_using_html2text(markdown_text: str) -> str: """Convert the markdown docs into plaintext using the html2text plugin diff --git a/sage/validators/config_toml.py b/sage/validators/config_toml.py index f7f2fbf..1547a64 100644 --- a/sage/validators/config_toml.py +++ b/sage/validators/config_toml.py @@ -267,40 +267,12 @@ class EmbeddingsConfig(BaseModel): dimension: Optional[int] = None -class CohereReRanker(Password): - """The Cohere rerank schema""" - - name: str - - @model_validator(mode="after") - def set_password(self) -> "Password": - if self.password is None: - if password_env := os.getenv("COHERE_API_KEY"): - self.password = SecretStr(password_env) - else: - raise ConfigException( - ( - "The COHERE_API_KEY | config password is missing. " - "Please add it via an env variable or to the config password field." - ) - ) - return self - - -class HuggingFaceReRanker(BaseModel): - """The HuggingFace schema""" - - name: str - revision: str - - -class ReRankerConfig(ModelValidateType): +class ReRankerConfig(BaseModel): """Reranker config schema""" - cohere: Optional[CohereReRanker] = None - huggingface: Optional[HuggingFaceReRanker] = None - type: Literal["cohere", "huggingface"] top_n: int = 5 + model: str + revision: Optional[str] = None class LLMConfig(BaseModel): diff --git a/tests/unit_tests/validators/test_config_toml.py b/tests/unit_tests/validators/test_config_toml.py index 2f99975..890643b 100644 --- a/tests/unit_tests/validators/test_config_toml.py +++ b/tests/unit_tests/validators/test_config_toml.py @@ -10,14 +10,12 @@ from sage.utils.exceptions import ConfigException from sage.validators.config_toml import ( - CohereReRanker, Config, ConfluenceModel, Core, EmbeddingsConfig, Files, GitlabModel, - HuggingFaceReRanker, Jira_Config, LLMConfig, ModelValidateType, @@ -433,96 +431,31 @@ def test_embedding_config_no_default_values(): EmbeddingsConfig(type="huggingface") -############################################################################### -##################### Unit Tests for the CohereReRanker ####################### - - -def test_cohere_reranker_password_validation(monkeypatch): - monkeypatch.setenv("COHERE_API_KEY", "test_cohere_password") - reranker = CohereReRanker(name="cohere_reranker") - assert reranker.password.get_secret_value() == "test_cohere_password" - - monkeypatch.delenv("COHERE_API_KEY", raising=False) - with pytest.raises(ConfigException) as exc_info: - CohereReRanker(name="cohere_reranker") - assert "The COHERE_API_KEY | config password is missing. " in str(exc_info.value) - - -############################################################################### -##################### Unit Tests for the HuggingFaceReRanker ################## - - -def test_huggingface_reranker_creation(): - reranker = HuggingFaceReRanker(name="hf_reranker", revision="v1") - assert reranker.name == "hf_reranker" - assert reranker.revision == "v1" - - ############################################################################### ##################### Unit Tests for the ReRankerConfig ####################### -def test_reranker_config_default_top_n(monkeypatch): - monkeypatch.setenv("COHERE_API_KEY", "test_cohere_password") - reranker_config = ReRankerConfig( - type="cohere", cohere=CohereReRanker(name="cohere_reranker") - ) +def test_reranker_config_default_top_n(): + reranker_config = ReRankerConfig(model="cohere/rerank-english-v3.0") assert reranker_config.top_n == 5 + assert reranker_config.revision is None -def test_reranker_config_custom_top_n(monkeypatch): - monkeypatch.setenv("COHERE_API_KEY", "test_cohere_password") +def test_reranker_config_custom_values(): reranker_config = ReRankerConfig( - type="cohere", cohere=CohereReRanker(name="cohere_reranker"), top_n=10 - ) - assert reranker_config.top_n == 10 - - -def test_reranker_config_type_validation(monkeypatch): - monkeypatch.setenv("COHERE_API_KEY", "test_cohere_password") - # Test that the type field accepts valid literals - reranker_config_cohere = ReRankerConfig( - type="cohere", cohere=CohereReRanker(name="cohere_reranker") - ) - assert reranker_config_cohere.type == "cohere" - - reranker_config_hf = ReRankerConfig( - type="huggingface", - huggingface=HuggingFaceReRanker(name="hf_reranker", revision="v1"), + top_n=10, model="cohere/rerank-english-v3.0", revision="12345" ) - assert reranker_config_hf.type == "huggingface" - - # Test that an invalid type raises a ValueError - with pytest.raises(ConfigException): - ReRankerConfig(type="invalid_type") - -def test_reranker_config_provided_model_validation(monkeypatch): - monkeypatch.setenv("COHERE_API_KEY", "test_cohere_password") - # Test that the correct reranker model is provided based on the type - reranker_config_cohere = ReRankerConfig( - type="cohere", cohere=CohereReRanker(name="cohere_reranker") - ) - assert reranker_config_cohere.cohere is not None - assert reranker_config_cohere.huggingface is None - - reranker_config_hf = ReRankerConfig( - type="huggingface", - huggingface=HuggingFaceReRanker(name="hf_reranker", revision="v1"), - ) - assert reranker_config_hf.huggingface is not None - assert reranker_config_hf.cohere is None + assert reranker_config.top_n == 10 + assert reranker_config.model == "cohere/rerank-english-v3.0" + assert reranker_config.revision == "12345" def test_reranker_config_missing_model_raises_exception(): - # Test that a missing reranker model raises a ConfigException - with pytest.raises(ConfigException) as exc_info: - ReRankerConfig(type="cohere") - assert "The Config data for type 'cohere' is missing." in str(exc_info.value) - - with pytest.raises(ConfigException) as exc_info: - ReRankerConfig(type="huggingface") - assert "The Config data for type 'huggingface' is missing." in str(exc_info.value) + # Test that a missing reranker model raises a ValidationError + with pytest.raises(ValidationError) as exc_info: + ReRankerConfig() + assert "Field required [type=missing, input_value={}, input_type=dict]" in str(exc_info.value) ################################################################################### @@ -567,9 +500,7 @@ def test_config_creation_with_all_fields(setup_env_vars): status_todo="To Do", ), source=Source(top_k=10), - reranker=ReRankerConfig( - type="cohere", cohere=CohereReRanker(name="cohere_reranker") - ), + reranker=ReRankerConfig(model="cohere/rerank-english-v2.0"), embedding={ "type": "litellm", "model": "openai/ada_embedding", From 14347056983bc9b2d18991037ff9f8255c40ce18 Mon Sep 17 00:00:00 2001 From: Ayo Ayibiowu Date: Mon, 11 Nov 2024 12:34:18 +0100 Subject: [PATCH 2/3] style: address some known style issues --- public/stylesheet.css | 7 +++++++ 1 file changed, 7 insertions(+) diff --git a/public/stylesheet.css b/public/stylesheet.css index 72b65ee..56f86ba 100644 --- a/public/stylesheet.css +++ b/public/stylesheet.css @@ -153,3 +153,10 @@ img[alt="logo"] { background-color: #0f0f0f !important; color: #d3e2df !important; } + + +/* Targeting code elements within specific div class */ +.MuiBox-root.css-13s85fp code { + background-color: #0f0f0f !important; + color: white !important; +} From 78396826e2eec183553670147b03f1fa882681c7 Mon Sep 17 00:00:00 2001 From: Ayo Ayibiowu Date: Mon, 11 Nov 2024 12:51:33 +0100 Subject: [PATCH 3/3] fix: an issue when revision is not set --- poetry.lock | 2457 ++++++++++++++++++++-------------------- pyproject.toml | 2 +- sage/utils/supports.py | 2 +- 3 files changed, 1234 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cache_dir: str = None - revision: str = None + revision: Optional[str] = None provider: str = "litellm" _hugging_reranker: BgeRerank = PrivateAttr(default=None)