diff --git a/.github/workflows/coverage.yaml b/.github/workflows/coverage.yaml
index 5309c26fc8..21d56abe4e 100644
--- a/.github/workflows/coverage.yaml
+++ b/.github/workflows/coverage.yaml
@@ -37,7 +37,7 @@ jobs:
 
       - name: Generate code coverage
         run: |
-          ./tarpaulin.sh
+          ./scripts/tarpaulin.sh
 
       - name: Archive Tarpaulin code coverage results
         uses: actions/upload-artifact@v4
@@ -125,7 +125,7 @@ jobs:
         run: sh ./test/message-generator/test/translation-proxy-old-share/translation-proxy-old-share.sh
 
       - name: Coverage report
-        run: sh ./code-coverage-report.sh
+        run: sh ./scripts/code-coverage-report.sh
 
       - name: Archive MG code coverage results
         uses: actions/upload-artifact@v4
diff --git a/.github/workflows/sv2-header-check.yaml b/.github/workflows/sv2-header-check.yaml
index 9d5149a781..732bd316b7 100644
--- a/.github/workflows/sv2-header-check.yaml
+++ b/.github/workflows/sv2-header-check.yaml
@@ -29,4 +29,4 @@ jobs:
       - name: Check sv2 header file is up to date with commit
         run: |
           echo Check sv2 header file is up to date with commit
-          sh ./sv2-header-check.sh
+          sh ./scripts/sv2-header-check.sh
diff --git a/build_header.sh b/build_header.sh
deleted file mode 100755
index 3d798731be..0000000000
--- a/build_header.sh
+++ /dev/null
@@ -1,17 +0,0 @@
-#! /bin/sh
-
-cargo install --version 0.20.0 cbindgen
-
-rm -f ./sv2.h
-touch ./sv2.h
-
-dir=${1:-protocols}
-
-cd "$dir"
-  cbindgen --crate const_sv2 >> ../sv2.h
-  cbindgen --crate binary_codec_sv2 >> ../sv2.h
-  cbindgen --crate common_messages_sv2 >> ../sv2.h
-  cbindgen --crate template_distribution_sv2 >> ../sv2.h
-  cbindgen --crate codec_sv2 >> ../sv2.h
-  cbindgen --crate sv2_ffi >> ../sv2.h
-cd ..
diff --git a/examples/interop-cpp/README.md b/examples/interop-cpp/README.md
index fff3df9f25..779b2fb37e 100644
--- a/examples/interop-cpp/README.md
+++ b/examples/interop-cpp/README.md
@@ -207,7 +207,7 @@ installation phase of `sv2_ffi` is replaced and `sv2.h` and the newly built `lib
 in the container (they are installed in `/gnu/store/[hash]-Rust-sv2_ffi-[version]/`).
 
 The manifest it expect to find `sv2.h` in the `sv2_ffi` package. Since the `sv2.h` is created manually with
-`/build_header.sh`, it is very easy to commit code with an out of date header file. To ensure all commits include
+`scripts/build_header.sh`, it is very easy to commit code with an out of date header file. To ensure all commits include
 the most updated header file, a GitHub Actions check is planned to be added.
 
 ## Install cbindgen
diff --git a/examples/interop-cpp/run.sh b/examples/interop-cpp/run.sh
index fe0dbdd18c..31f914e5d9 100755
--- a/examples/interop-cpp/run.sh
+++ b/examples/interop-cpp/run.sh
@@ -14,7 +14,7 @@ cargo build \
     -p sv2_ffi && \
     cp ../../protocols/target/release/libsv2_ffi.a ./
 
-../../build_header.sh ../../protocols && mv ../../sv2.h .
+../../scripts/build_header.sh ../../protocols && mv ../../scripts/sv2.h .
 
 g++ -I ./ ./template-provider/template-provider.cpp  libsv2_ffi.a  -lpthread -ldl
 
diff --git a/build-on-all-workspaces.sh b/scripts/build-on-all-workspaces.sh
similarity index 100%
rename from build-on-all-workspaces.sh
rename to scripts/build-on-all-workspaces.sh
diff --git a/scripts/build_header.sh b/scripts/build_header.sh
new file mode 100755
index 0000000000..e0e20cd7e9
--- /dev/null
+++ b/scripts/build_header.sh
@@ -0,0 +1,17 @@
+#! /bin/sh
+
+cargo install --version 0.20.0 cbindgen
+
+rm -f ./scripts/sv2.h
+touch ./scripts/sv2.h
+
+dir=${1:-../protocols}
+
+cd "$dir"
+  cbindgen --crate const_sv2 >> ../scripts/sv2.h
+  cbindgen --crate binary_codec_sv2 >> ../scripts/sv2.h
+  cbindgen --crate common_messages_sv2 >> ../scripts/sv2.h
+  cbindgen --crate template_distribution_sv2 >> ../scripts/sv2.h
+  cbindgen --crate codec_sv2 >> ../scripts/sv2.h
+  cbindgen --crate sv2_ffi >> ../scripts/sv2.h
+cd ..
diff --git a/check-versioning-lib-release.sh b/scripts/check-versioning-lib-release.sh
similarity index 100%
rename from check-versioning-lib-release.sh
rename to scripts/check-versioning-lib-release.sh
diff --git a/clippy-on-all-workspaces.sh b/scripts/clippy-on-all-workspaces.sh
similarity index 100%
rename from clippy-on-all-workspaces.sh
rename to scripts/clippy-on-all-workspaces.sh
diff --git a/code-coverage-report.sh b/scripts/code-coverage-report.sh
similarity index 100%
rename from code-coverage-report.sh
rename to scripts/code-coverage-report.sh
diff --git a/message-generator-tests.sh b/scripts/message-generator-tests.sh
similarity index 100%
rename from message-generator-tests.sh
rename to scripts/message-generator-tests.sh
diff --git a/mg-codecov-tests.sh b/scripts/mg-codecov-tests.sh
similarity index 100%
rename from mg-codecov-tests.sh
rename to scripts/mg-codecov-tests.sh
diff --git a/sv2-header-check.sh b/scripts/sv2-header-check.sh
similarity index 96%
rename from sv2-header-check.sh
rename to scripts/sv2-header-check.sh
index 6e04691433..b39b0af540 100755
--- a/sv2-header-check.sh
+++ b/scripts/sv2-header-check.sh
@@ -21,9 +21,10 @@ set -ex
 # cargo install cbindgen --force bts
 # cbindgen -V
 
-cd ./protocols/v2/sv2-ffi
+echo $PWD
+cd protocols/v2/sv2-ffi
 SHA1_1=$(sha1sum sv2.h)
-cd ../../..
+cd ../../../scripts
 
 BUILD_SCRIPT="./build_header.sh"
 sh ./"$BUILD_SCRIPT"
diff --git a/sv2-publish.sh b/scripts/sv2-publish.sh
similarity index 100%
rename from sv2-publish.sh
rename to scripts/sv2-publish.sh
diff --git a/tarpaulin.sh b/scripts/tarpaulin.sh
similarity index 100%
rename from tarpaulin.sh
rename to scripts/tarpaulin.sh