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Lab 04: Structuring Projects and Inputs
Ryan edited this page Jan 8, 2024
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Go to exercise directory 04_structure_and_input and change to the pipeline directory.
This project is organized as follows:
.
├── fasta_seqs
│ ├── seqs_1.fna
│ ├── seqs_2.fna
│ ├── seqs_3.fna
│ ├── seqs_4.fna
│ └── seqs_5.fna
├── pipeline
│ ├── main.nf
│ ├── modules
│ │ └── fasta_utils.nf
│ └── nextflow.config
└── run_01.sh
Notice that we now have a modules subdirectory containing 'fasta_utils.nf'. We also have a practice directory of 5 fasta sequence files.