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fix flux unit conversions in plugins #2876

fix flux unit conversions in plugins

fix flux unit conversions in plugins #2876

Workflow file for this run

name: Build standalone
on:
push:
branches:
- main
- 'v*'
tags:
- 'v*'
workflow_dispatch:
pull_request:
types: [opened, synchronize, labeled, unlabeled]
defaults:
run:
shell: bash {0}
jobs:
build_binary_not_osx:
runs-on: ${{ matrix.os }}-latest
if: (github.repository == 'spacetelescope/jdaviz' && (github.event_name == 'push' || github.event_name == 'workflow_dispatch' || contains(github.event.pull_request.labels.*.name, 'Build standalone')))
strategy:
matrix:
os: [ubuntu, windows]
steps:
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2
with:
fetch-depth: 0
- uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b # v5.3.0
with:
python-version: "3.11"
- name: Install jdaviz
run: pip install .[test]
- name: Install pyinstaller
run: pip install "pyinstaller<6"
- name: Create standalone binary
env:
DEVELOPER_ID_APPLICATION: ${{ secrets.DEVELOPER_ID_APPLICATION }}
run: (cd standalone; pyinstaller ./jdaviz.spec)
- name: Run jdaviz cmd in background
run: ./standalone/dist/jdaviz/jdaviz-cli imviz&
- name: Install playwright
run: (pip install playwright; playwright install chromium)
- name: Install pytest
run: pip install pytest-playwright
- name: Wait for Solara to get online
uses: ifaxity/wait-on-action@a7d13170ec542bdca4ef8ac4b15e9c6aa00a6866 # v1.2.1
with:
resource: tcp:8765
timeout: 60000
- name: Test standalone
run: (cd standalone; touch pytest.ini; JUPYTER_PLATFORM_DIRS=1 pytest test_standalone.py --video=on)
- name: Upload Test artifacts
if: github.event_name != 'pull_request'
uses: actions/upload-artifact@b4b15b8c7c6ac21ea08fcf65892d2ee8f75cf882 # v4.4.3
with:
name: test-results-${{ matrix.os }}
path: standalone/test-results
- name: Upload jdaviz standalone (non-OSX)
if: github.event_name != 'pull_request'
uses: actions/upload-artifact@b4b15b8c7c6ac21ea08fcf65892d2ee8f75cf882 # v4.4.3
with:
name: jdaviz-standlone-${{ matrix.os }}
path: |
standalone/dist/jdaviz
# Do not want to deal with OSX certs in pull request builds.
build_binary_osx:
runs-on: ${{ matrix.os }}-latest
if: (github.repository == 'spacetelescope/jdaviz' && (github.event_name == 'push' || github.event_name == 'workflow_dispatch'))
strategy:
matrix:
os: [macos]
steps:
# osx signing based on https://melatonin.dev/blog/how-to-code-sign-and-notarize-macos-audio-plugins-in-ci/
- name: Import Certificates (macOS)
uses: apple-actions/import-codesign-certs@63fff01cd422d4b7b855d40ca1e9d34d2de9427d # v3
if: ${{ matrix.os == 'macos' }}
with:
p12-file-base64: ${{ secrets.DEV_ID_APP_CERT }}
p12-password: ${{ secrets.DEV_ID_APP_PASSWORD }}
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2
with:
fetch-depth: 0
- uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b # v5.3.0
with:
python-version: "3.11"
- name: Install jdaviz
run: pip install .[test]
- name: Install pyinstaller
run: pip install "pyinstaller<6"
- name: Create standalone binary
env:
DEVELOPER_ID_APPLICATION: ${{ secrets.DEVELOPER_ID_APPLICATION }}
run: (cd standalone; pyinstaller ./jdaviz.spec)
- name: Remove invalid files for OSX
# hopefully we can improve this in the future
# by using good hooks
# i think the issue is that we have a . in the name, there are many
# google hits on pyqt having the same issue
# and we might be able to remove it after https://github.com/pyinstaller/pyinstaller/pull/7619
# is released (pyinstaller 5.13 probably)
if: ${{ matrix.os == 'macos' }}
run: |
rm -rf standalone/dist/jdaviz.app/Contents/MacOS/skimage/.dylibs
rm -rf standalone/dist/jdaviz.app/Contents/Resources/skimage/.dylibs
rm -rf standalone/dist/jdaviz.app/Contents/MacOS/shapely/.dylibs
rm -rf standalone/dist/jdaviz.app/Contents/Resources/shapely/.dylibs
rm -rf standalone/dist/jdaviz.app/Contents/MacOS/scipy/.dylibs
rm -rf standalone/dist/jdaviz.app/Contents/Resources/scipy/.dylibs
rm -rf standalone/dist/jdaviz.app/Contents/Resources/scipy/special/*.dylib
- name: Codesign (OSX)
if: ${{ matrix.os == 'macos' }}
run: |
cd standalone/dist
codesign --deep --force --options=runtime --entitlements ../entitlements.plist --sign ${{ secrets.DEVELOPER_ID_APPLICATION }} --timestamp jdaviz.app
- name: Create dmg (OSX)
# if we do not call always() GHA will && with success()
if: ${{ always() && (matrix.os == 'macos') }}
# it seems ditto (not zip) should be used in combination with notarization
# see https://developer.apple.com/forums/thread/116831
# but dmg also works
# see https://github.com/glue-viz/glue-standalone-apps/blob/main/.github/workflows/build_stable.yml
run: |
rm -rf standalone/dist/jdaviz
hdiutil create -volname "Jdaviz" -srcfolder standalone/dist -ov -format UDZO standalone/dist/jdaviz.dmg
- name: Notary step + stapling (OSX)
if: ${{ matrix.os == 'macos' }}
run: |
output=$(xcrun notarytool submit standalone/dist/jdaviz.dmg --apple-id ${{ secrets.NOTARIZATION_USERNAME }} --team-id ${{ secrets.TEAM_ID }} --wait --password ${{ secrets.NOTARIZATION_PASSWORD }}) || true
echo "$output"
uuid=$(echo "$output" | awk -F '[ :]+' '/id:/ {print $3; exit}')
echo "UUID: $uuid"
if [[ $output == *"status: Accepted"* ]]; then
echo "Great, notarization succeeded, staple it!"
xcrun stapler staple standalone/dist/jdaviz.dmg
else
echo "Log output for failed notarization: $uuid"
xcrun notarytool log --apple-id ${{ secrets.NOTARIZATION_USERNAME }} --team-id ${{ secrets.TEAM_ID }} --password ${{ secrets.NOTARIZATION_PASSWORD }} $uuid || true
fi
- name: Validate app (OSX)
if: ${{ matrix.os == 'macos' }}
run: |
spctl -a -vvv -t execute standalone/dist/jdaviz.app
- name: Run jdaviz cmd in background
if: ${{ matrix.os == 'macos' }}
run: ./standalone/dist/jdaviz.app/Contents/MacOS/jdaviz-cli imviz&
- name: Install playwright
run: (pip install playwright; playwright install chromium)
- name: Install pytest
run: pip install pytest-playwright
- name: Wait for Solara to get online
uses: ifaxity/wait-on-action@a7d13170ec542bdca4ef8ac4b15e9c6aa00a6866 # v1.2.1
with:
resource: tcp:8765
timeout: 60000
- name: Test standalone
run: (cd standalone; touch pytest.ini; JUPYTER_PLATFORM_DIRS=1 pytest test_standalone.py --video=on)
- name: Upload Test artifacts
if: always()
uses: actions/upload-artifact@b4b15b8c7c6ac21ea08fcf65892d2ee8f75cf882 # v4.4.3
with:
name: test-results-${{ matrix.os }}
path: standalone/test-results
- name: Upload jdaviz standalone (OSX)
if: ${{ always() && (matrix.os == 'macos') }}
uses: actions/upload-artifact@b4b15b8c7c6ac21ea08fcf65892d2ee8f75cf882 # v4.4.3
with:
name: jdaviz-standlone-${{ matrix.os }}
path: standalone/dist/jdaviz.dmg