From 759b2e93958b43ed0adaf441108d9eeee53dad23 Mon Sep 17 00:00:00 2001
From: Luiz Irber <contact+github@luizirber.org>
Date: Sun, 3 Dec 2023 11:06:49 -0800
Subject: [PATCH] use released sourmash, 0.12.0

---
 Cargo.lock | 38 +++++++++++++++++++-------------------
 Cargo.toml |  3 +--
 2 files changed, 20 insertions(+), 21 deletions(-)

diff --git a/Cargo.lock b/Cargo.lock
index 6711779..34e9e92 100644
--- a/Cargo.lock
+++ b/Cargo.lock
@@ -1209,9 +1209,9 @@ dependencies = [
 
 [[package]]
 name = "js-sys"
-version = "0.3.64"
+version = "0.3.66"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "c5f195fe497f702db0f318b07fdd68edb16955aed830df8363d837542f8f935a"
+checksum = "cee9c64da59eae3b50095c18d3e74f8b73c0b86d2792824ff01bbce68ba229ca"
 dependencies = [
  "wasm-bindgen",
 ]
@@ -2440,9 +2440,9 @@ dependencies = [
 
 [[package]]
 name = "serde_json"
-version = "1.0.107"
+version = "1.0.108"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "6b420ce6e3d8bd882e9b243c6eed35dbc9a6110c9769e74b584e0d68d1f20c65"
+checksum = "3d1c7e3eac408d115102c4c24ad393e0821bb3a5df4d506a80f85f7a742a526b"
 dependencies = [
  "itoa",
  "ryu",
@@ -2537,10 +2537,10 @@ checksum = "c361f1b577b7528df46d04ee4d800a2fb4eafd44f187940789e8ab7fd378b509"
 [[package]]
 name = "sourmash"
 version = "0.12.0"
-source = "git+https://github.com/sourmash-bio/sourmash?branch=lirber/mastiff#a4949b096f6f59210e3e9d6283ce696342a82e8c"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "760c7b049cc70294122c44c4e6d0922ed0e79a8e04f2d739b98a982027a9fd4a"
 dependencies = [
  "az",
- "bytecount",
  "byteorder",
  "camino",
  "cfg-if 1.0.0",
@@ -2982,7 +2982,7 @@ version = "1.6.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "97fee6b57c6a41524a810daee9286c02d7752c4253064d0b05472833a438f675"
 dependencies = [
- "cfg-if 1.0.0",
+ "cfg-if 0.1.10",
  "rand",
  "static_assertions",
 ]
@@ -3155,9 +3155,9 @@ checksum = "9c8d87e72b64a3b4db28d11ce29237c246188f4f51057d65a7eab63b7987e423"
 
 [[package]]
 name = "wasm-bindgen"
-version = "0.2.87"
+version = "0.2.89"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "7706a72ab36d8cb1f80ffbf0e071533974a60d0a308d01a5d0375bf60499a342"
+checksum = "0ed0d4f68a3015cc185aff4db9506a015f4b96f95303897bfa23f846db54064e"
 dependencies = [
  "cfg-if 1.0.0",
  "serde",
@@ -3167,9 +3167,9 @@ dependencies = [
 
 [[package]]
 name = "wasm-bindgen-backend"
-version = "0.2.87"
+version = "0.2.89"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "5ef2b6d3c510e9625e5fe6f509ab07d66a760f0885d858736483c32ed7809abd"
+checksum = "1b56f625e64f3a1084ded111c4d5f477df9f8c92df113852fa5a374dbda78826"
 dependencies = [
  "bumpalo",
  "log",
@@ -3194,9 +3194,9 @@ dependencies = [
 
 [[package]]
 name = "wasm-bindgen-macro"
-version = "0.2.87"
+version = "0.2.89"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "dee495e55982a3bd48105a7b947fd2a9b4a8ae3010041b9e0faab3f9cd028f1d"
+checksum = "0162dbf37223cd2afce98f3d0785506dcb8d266223983e4b5b525859e6e182b2"
 dependencies = [
  "quote",
  "wasm-bindgen-macro-support",
@@ -3204,9 +3204,9 @@ dependencies = [
 
 [[package]]
 name = "wasm-bindgen-macro-support"
-version = "0.2.87"
+version = "0.2.89"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "54681b18a46765f095758388f2d0cf16eb8d4169b639ab575a8f5693af210c7b"
+checksum = "f0eb82fcb7930ae6219a7ecfd55b217f5f0893484b7a13022ebb2b2bf20b5283"
 dependencies = [
  "proc-macro2",
  "quote",
@@ -3217,15 +3217,15 @@ dependencies = [
 
 [[package]]
 name = "wasm-bindgen-shared"
-version = "0.2.87"
+version = "0.2.89"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "ca6ad05a4870b2bf5fe995117d3728437bd27d7cd5f06f13c17443ef369775a1"
+checksum = "7ab9b36309365056cd639da3134bf87fa8f3d86008abf99e612384a6eecd459f"
 
 [[package]]
 name = "web-sys"
-version = "0.3.64"
+version = "0.3.66"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "9b85cbef8c220a6abc02aefd892dfc0fc23afb1c6a426316ec33253a3877249b"
+checksum = "50c24a44ec86bb68fbecd1b3efed7e85ea5621b39b35ef2766b66cd984f8010f"
 dependencies = [
  "js-sys",
  "wasm-bindgen",
diff --git a/Cargo.toml b/Cargo.toml
index 0dc3963..a59fdeb 100644
--- a/Cargo.toml
+++ b/Cargo.toml
@@ -20,8 +20,7 @@ niffler = { version = "2.4.0", default-features = false, features = [ "gz" ]}
 numsep = "0.1.12"
 reqwest = { version = "0.11.11", default-features = false, features = [ "blocking", "rustls-tls" ] }
 size = "0.4.0"
-sourmash = { git = "https://github.com/sourmash-bio/sourmash", branch = "lirber/mastiff", features = ["branchwater"] }
-#sourmash = { path = "../sm_worktrees/mastiff/src/core", features = ["branchwater"] }
+sourmash = { version = "0.12.0", features = ["branchwater"] }
 
 serde_json = "1.0.83"
 # axum deps