From b5a4fc46bd543e3a89e4003e3093c3bb0c6b9fd3 Mon Sep 17 00:00:00 2001 From: Sergey O Date: Tue, 28 Feb 2023 07:10:00 -0500 Subject: [PATCH] pin tensorflow version --- AlphaFold2.ipynb | 2 +- batch/AlphaFold2_batch.ipynb | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/AlphaFold2.ipynb b/AlphaFold2.ipynb index 3b341138..80fe1d52 100644 --- a/AlphaFold2.ipynb +++ b/AlphaFold2.ipynb @@ -212,7 +212,7 @@ "if [ ! -f COLABFOLD_READY ]; then\n", " # install dependencies\n", " # We have to use \"--no-warn-conflicts\" because colab already has a lot preinstalled with requirements different to ours\n", - " pip install -q --no-warn-conflicts \"colabfold[alphafold-minus-jax] @ git+https://github.com/sokrypton/ColabFold@v1.4.0\" \"tensorflow-cpu==2.11.0\"\n", + " pip install -q --no-warn-conflicts \"colabfold[alphafold-minus-jax] @ git+https://github.com/sokrypton/ColabFold@v1.4.0\" \"tensorflow-cpu==2.7.4\"\n", " pip uninstall -yq jax jaxlib\n", " pip install -q \"jax[cuda]==0.3.25\" -f https://storage.googleapis.com/jax-releases/jax_cuda_releases.html\n", " touch COLABFOLD_READY\n", diff --git a/batch/AlphaFold2_batch.ipynb b/batch/AlphaFold2_batch.ipynb index b28b3501..16fe98ea 100644 --- a/batch/AlphaFold2_batch.ipynb +++ b/batch/AlphaFold2_batch.ipynb @@ -119,7 +119,7 @@ "if [ ! -f COLABFOLD_READY ]; then\n", " # install dependencies\n", " # We have to use \"--no-warn-conflicts\" because colab already has a lot preinstalled with requirements different to ours\n", - " pip install -q --no-warn-conflicts \"colabfold[alphafold-minus-jax] @ git+https://github.com/sokrypton/ColabFold@v1.4.0\" \"tensorflow-cpu==2.11.0\"\n", + " pip install -q --no-warn-conflicts \"colabfold[alphafold-minus-jax] @ git+https://github.com/sokrypton/ColabFold@v1.4.0\" \"tensorflow-cpu==2.7.4\"\n", " pip uninstall -yq jax jaxlib\n", " pip install -q \"jax[cuda]==0.3.25\" -f https://storage.googleapis.com/jax-releases/jax_cuda_releases.html\n", " touch COLABFOLD_READY\n",