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@@ -30,7 +30,7 @@ Email: `[email protected]` for questions. | |
* Mirarab, Siavash, and Tandy Warnow. “ASTRAL-II: Coalescent-Based Species Tree Estimation with Many Hundreds of Taxa and Thousands of Genes.”. Bioinformatics (ISMB special issue) 31 (12): i44–i52. 2015. [doi:10.1093/bioinformatics/btv234](http://bioinformatics.oxfordjournals.org/content/31/12/i44) | ||
- Since version 5.1.1, the code corresponds to ASTRAL-III, described in: | ||
* Zhang, Chao, Erfan Sayyari, and Siavash Mirarab. “ASTRAL-III: Increased Scalability and Impacts of Contracting Low Support Branches.” In Comparative Genomics: 15th International Workshop, RECOMB CG, 2017. [doi:10.1007/978-3-319-67979-2_4](https://doi.org/10.1007/978-3-319-67979-2_4). | ||
* Since version 4.10.0, ASTRAL can also compute branch length (in coalescent units) and a measure of support called “local posterior probability”, described here: | ||
- Since version 4.10.0, ASTRAL can also compute branch length (in coalescent units) and a measure of support called “local posterior probability”, described here: | ||
* Sayyari, Erfan, and Siavash Mirarab. “Fast Coalescent-Based Computation of Local Branch Support from Quartet Frequencies.” Molecular Biology and Evolution 33 (7): 1654–68. 2016. [doi:10.1093/molbev/msw079](http://mbe.oxfordjournals.org/content/early/2016/05/12/molbev.msw079.short?rss=1) | ||
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This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
|
@@ -30,7 +30,7 @@ Email: `[email protected]` for questions. | |
* Mirarab, Siavash, and Tandy Warnow. “ASTRAL-II: Coalescent-Based Species Tree Estimation with Many Hundreds of Taxa and Thousands of Genes.”. Bioinformatics (ISMB special issue) 31 (12): i44–i52. 2015. [doi:10.1093/bioinformatics/btv234](http://bioinformatics.oxfordjournals.org/content/31/12/i44) | ||
- Since version 5.1.1, the code corresponds to ASTRAL-III, described in: | ||
* Zhang, Chao, Erfan Sayyari, and Siavash Mirarab. “ASTRAL-III: Increased Scalability and Impacts of Contracting Low Support Branches.” In Comparative Genomics: 15th International Workshop, RECOMB CG, 2017. [doi:10.1007/978-3-319-67979-2_4](https://doi.org/10.1007/978-3-319-67979-2_4). | ||
* Since version 4.10.0, ASTRAL can also compute branch length (in coalescent units) and a measure of support called “local posterior probability”, described here: | ||
- Since version 4.10.0, ASTRAL can also compute branch length (in coalescent units) and a measure of support called “local posterior probability”, described here: | ||
* Sayyari, Erfan, and Siavash Mirarab. “Fast Coalescent-Based Computation of Local Branch Support from Quartet Frequencies.” Molecular Biology and Evolution 33 (7): 1654–68. 2016. [doi:10.1093/molbev/msw079](http://mbe.oxfordjournals.org/content/early/2016/05/12/molbev.msw079.short?rss=1) | ||
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