From dae08e8d8e283ecc8f52297082288fa674c966ba Mon Sep 17 00:00:00 2001 From: github-actions Date: Mon, 4 Nov 2024 00:54:31 +0000 Subject: [PATCH] Automated deployment with updated cache 2024-11-04 --- counts.json | 474 +++++++++--------- .../a/amplici:2.2--hd50232a_0.json | 3 + .../l/liana:1.4.0--pyhdfd78af_0.json | 241 +++++++++ 3 files changed, 484 insertions(+), 234 deletions(-) create mode 100644 quay.io/biocontainers/a/amplici:2.2--hd50232a_0.json create mode 100644 quay.io/biocontainers/l/liana:1.4.0--pyhdfd78af_0.json diff --git a/counts.json b/counts.json index fc4a3ec..d387164 100644 --- a/counts.json +++ b/counts.json @@ -2326,7 +2326,7 @@ "2csfastq_1csfastq": 1, "2ft": 2, "2ndscore": 1, - "2to3": 3811, + "2to3": 3812, "2to3-3.10": 831, "2to3-3.11": 283, "2to3-3.12": 290, @@ -2335,7 +2335,7 @@ "2to3-3.6": 344, "2to3-3.7": 383, "2to3-3.8": 578, - "2to3-3.9": 660, + "2to3-3.9": 661, "3EdgeTests": 1, "3_1_filter_mapQ_for_sam.pl": 1, "3seq": 1, @@ -5214,7 +5214,7 @@ "addtit.pl": 2, "adf_checker.pl": 1, "adhocfilelist": 1, - "adig": 4618, + "adig": 4619, "adjustPeakFile.pl": 5, "adjustRedunGroupFile.pl": 5, "adjustScanRankerScoreByGroup": 2, @@ -5331,7 +5331,7 @@ "agrvate": 1, "agtsampleinforw.dll": 2, "ahmm-s": 1, - "ahost": 4618, + "ahost": 4619, "airr-tools": 5, "akita_data.py": 1, "akita_data_read.py": 1, @@ -7246,7 +7246,7 @@ "broad_utils.py": 1, "brockman_pipeline": 1, "brooklyn_plot": 1, - "brotli": 466, + "brotli": 467, "browse": 18, "bs_call": 2, "bs_seeker2-align.py": 1, @@ -7351,7 +7351,7 @@ "bundlelinks": 2, "bundler": 19, "bunwarpj": 4, - "bunzip2": 6806, + "bunzip2": 6807, "burden_test_vase": 1, "burst_linux_DB12": 1, "burst_linux_DB15": 1, @@ -7405,16 +7405,16 @@ "bxStats.py": 1, "bxcl_seqqc": 1, "bxtools": 1, - "bzcat": 6806, - "bzcmp": 6806, - "bzdiff": 6806, - "bzegrep": 6806, - "bzfgrep": 6806, - "bzgrep": 6806, - "bzip2": 6807, - "bzip2recover": 6806, - "bzless": 6806, - "bzmore": 6806, + "bzcat": 6807, + "bzcmp": 6807, + "bzdiff": 6807, + "bzegrep": 6807, + "bzfgrep": 6807, + "bzgrep": 6807, + "bzip2": 6808, + "bzip2recover": 6807, + "bzless": 6807, + "bzmore": 6807, "c++": 5, "c++filt": 8, "c-index-test": 8, @@ -7431,7 +7431,7 @@ "cPecanLibTests": 1, "cPecanModifyHmm": 1, "cPecanRealign": 1, - "c_rehash": 7952, + "c_rehash": 7953, "ca2ace.pl": 3, "ca2ctg": 2, "ca2mates": 2, @@ -7612,7 +7612,7 @@ "capnpc-capnp": 58, "capnpc-cython": 1, "capri_eval": 1, - "captoinfo": 7884, + "captoinfo": 7885, "captus_assembly": 1, "caqc.pl": 3, "caqc_help.ini": 3, @@ -7700,7 +7700,7 @@ "cbSeurat": 1, "cbTool": 1, "cbUpgrade": 1, - "cbc": 110, + "cbc": 111, "cbi": 1, "cblaster": 1, "cbrunsli": 28, @@ -8060,7 +8060,7 @@ "cit2pmid": 39, "civicpy": 1, "cjk-gs-integrate": 1, - "cjpeg": 5849, + "cjpeg": 5850, "ckeygen": 1, "cksum": 85, "claMLST": 1, @@ -8171,7 +8171,7 @@ "cleanup-coverage.py": 2, "cleanup-stale-gcp-resources.py": 1, "cleanup.py": 1, - "clear": 7884, + "clear": 7885, "clearCNV": 1, "clearcut": 1, "cleric": 1, @@ -8225,7 +8225,7 @@ "closest_residues": 1, "cloudgene.yaml": 1, "clove": 1, - "clp": 111, + "clp": 112, "clsify": 1, "clstr2tree.pl": 50, "clstr2txt.pl": 50, @@ -8548,7 +8548,7 @@ "compileSpliceCands": 13, "compile_STARE_Linux.sh": 1, "compile_STARE_macOS.sh": 1, - "compile_et": 5909, + "compile_et": 5910, "compiled_table.py": 1, "compleasm": 1, "complementBed": 280, @@ -9217,9 +9217,9 @@ "curate_universe": 1, "curesim": 2, "curl": 5150, - "curl-config": 6013, + "curl-config": 6014, "curlywhirly": 1, - "curve_keygen": 72, + "curve_keygen": 73, "cusp": 27, "custom.py": 1, "custom_logger.py": 1, @@ -9539,7 +9539,7 @@ "debreak_writevcf.py": 1, "debruijn": 1, "debubble.py": 1, - "debugpy": 2, + "debugpy": 3, "dec265": 1, "dec2ctime.pl": 1, "decOM": 1, @@ -9840,7 +9840,7 @@ "django-admin": 4, "django-admin.py": 3, "django-admin.pyc": 1, - "djpeg": 5849, + "djpeg": 5850, "dkfzbiasfilter.py": 1, "dkfzbiasfilter_summarize.py": 1, "dlcoal_to_dlcpar": 1, @@ -10850,7 +10850,7 @@ "ezez4makefile_v4.pl": 1, "ezez4qsub_vx1.pl": 1, "ezez_vx1.pl": 1, - "f2py": 2165, + "f2py": 2166, "f2py2": 136, "f2py2.7": 136, "f2py3": 1601, @@ -11315,8 +11315,8 @@ "fasxl": 2, "fathom": 2, "favites_lite.py": 1, - "fax2ps": 5321, - "fax2tiff": 5321, + "fax2ps": 5322, + "fax2tiff": 5322, "fba": 1, "fc": 1, "fc-cache": 5378, @@ -11908,7 +11908,7 @@ "font-awesome-to-png": 2, "font2c": 3, "fontinst": 1, - "fonttools": 440, + "fonttools": 441, "fop": 1, "forceOneClusterPerPairMem.py": 1, "forest.py": 1, @@ -12000,7 +12000,7 @@ "freec": 1, "freec2bed.pl": 1, "freec2circos.pl": 1, - "freetype-config": 5912, + "freetype-config": 5913, "freeze_graph": 25, "freq2group.pl": 5, "frequency.py": 1, @@ -13187,7 +13187,7 @@ "gi2taxid.sh": 31, "gid-taxid": 1, "gie": 43, - "gif2h5": 570, + "gif2h5": 571, "gif2hdf": 127, "gif2rgb": 776, "gif2tiff": 189, @@ -13582,7 +13582,7 @@ "gsdj500": 106, "gsea": 1, "gsea-cli": 1, - "gseapy": 5, + "gseapy": 6, "gsettings": 1665, "gsf": 1, "gsf-office-thumbnailer": 1, @@ -13601,7 +13601,7 @@ "gsnapl.sse42": 12, "gsnd": 106, "gsort": 5, - "gss-client": 5909, + "gss-client": 5910, "gss-server": 2, "gst-completion-helper": 1, "gst-device-monitor-1.0": 241, @@ -13831,34 +13831,34 @@ "h4_ncgen": 127, "h4cc": 127, "h4redeploy": 127, - "h52gif": 570, - "h5c++": 570, - "h5cc": 575, - "h5clear": 554, - "h5copy": 570, - "h5debug": 570, - "h5delete": 110, - "h5diff": 570, - "h5dump": 572, - "h5fc": 557, - "h5format_convert": 554, + "h52gif": 571, + "h5c++": 571, + "h5cc": 576, + "h5clear": 555, + "h5copy": 571, + "h5debug": 571, + "h5delete": 111, + "h5diff": 571, + "h5dump": 573, + "h5fc": 558, + "h5format_convert": 555, "h5fuse": 1, - "h5fuse.sh": 77, - "h5import": 570, - "h5jam": 570, - "h5ls": 570, - "h5mkgrp": 570, + "h5fuse.sh": 78, + "h5import": 571, + "h5jam": 571, + "h5ls": 571, + "h5mkgrp": 571, "h5pcc": 3, "h5perf": 3, - "h5perf_serial": 570, + "h5perf_serial": 571, "h5pfc": 3, - "h5redeploy": 570, - "h5repack": 570, - "h5repart": 570, - "h5stat": 570, - "h5tools_test_utils": 57, - "h5unjam": 570, - "h5watch": 554, + "h5redeploy": 571, + "h5repack": 571, + "h5repart": 571, + "h5stat": 571, + "h5tools_test_utils": 58, + "h5unjam": 571, + "h5watch": 555, "hAMRoaster": 1, "h_num": 1, "haarz.x": 1, @@ -14326,7 +14326,7 @@ "htsget": 2, "htsinfer": 1, "httpcfg": 16, - "httpx": 22, + "httpx": 23, "hubward": 1, "hug": 1, "huge-count.pl": 2, @@ -14385,21 +14385,21 @@ "humann_unpack_pathways": 1, "humid": 1, "hv-pipeline.py": 1, - "hwloc-annotate": 92, + "hwloc-annotate": 93, "hwloc-assembler": 2, "hwloc-assembler-remote": 2, - "hwloc-bind": 92, - "hwloc-calc": 92, - "hwloc-compress-dir": 92, - "hwloc-diff": 92, + "hwloc-bind": 93, + "hwloc-calc": 93, + "hwloc-compress-dir": 93, + "hwloc-diff": 93, "hwloc-distances": 2, - "hwloc-distrib": 92, - "hwloc-gather-cpuid": 90, - "hwloc-gather-topology": 92, - "hwloc-info": 92, - "hwloc-ls": 92, - "hwloc-patch": 92, - "hwloc-ps": 92, + "hwloc-distrib": 93, + "hwloc-gather-cpuid": 91, + "hwloc-gather-topology": 93, + "hwloc-info": 93, + "hwloc-ls": 93, + "hwloc-patch": 93, + "hwloc-ps": 93, "hyb_analyze": 1, "hyb_check": 1, "hyb_eval": 1, @@ -14425,7 +14425,7 @@ "hyphy": 3, "hypnotoad": 6, "hypo": 1, - "hypothesis": 3, + "hypothesis": 4, "hypro.py": 1, "i386": 13, "iCLIPro": 1, @@ -14492,6 +14492,7 @@ "idemux": 1, "idemuxCPP": 1, "identify": 76, + "identify-cli": 1, "identify-indel-regions.pl": 1, "identifyHMM": 1, "identifySorting": 1, @@ -14502,7 +14503,7 @@ "idfetch": 1, "idiag-socket-details": 14, "idle": 334, - "idle3": 3486, + "idle3": 3487, "idle3.10": 831, "idle3.11": 283, "idle3.12": 290, @@ -14512,7 +14513,7 @@ "idle3.6": 344, "idle3.7": 383, "idle3.8": 578, - "idle3.9": 660, + "idle3.9": 661, "idlj": 117, "idmatrix.sh": 31, "idn": 31, @@ -14726,11 +14727,11 @@ "infoalign": 27, "infoassembly": 27, "infobase": 27, - "infocmp": 7884, + "infocmp": 7885, "inforesidue": 27, "informant.py": 1, "infoseq": 27, - "infotocap": 7884, + "infotocap": 7885, "ini2xml": 39, "init_Trinotate_sqlite_db.pl": 1, "init_db.sh": 1, @@ -14904,9 +14905,9 @@ "iptest2": 7, "iptest3": 46, "ipyrad": 1, - "ipython": 103, + "ipython": 104, "ipython2": 7, - "ipython3": 96, + "ipython3": 97, "ipython3.10": 1, "ipython3.9": 4, "iqkm": 1, @@ -15112,7 +15113,7 @@ "jiv": 6, "jjs": 421, "jlink": 445, - "jlpm": 3, + "jlpm": 4, "jmap": 554, "jmod": 445, "jmztab-m": 1, @@ -15148,8 +15149,8 @@ "jp.py": 106, "jpackage": 134, "jpeg2hdf": 127, - "jpegtran": 5849, - "jpgicc": 1053, + "jpegtran": 5850, + "jpgicc": 1054, "jpredapi": 1, "jps": 554, "jq": 310, @@ -15170,8 +15171,8 @@ "jsonpatch": 9, "jsonpath.py": 1, "jsonpath_ng": 1, - "jsonpointer": 12, - "jsonschema": 227, + "jsonpointer": 13, + "jsonschema": 228, "jstack": 554, "jstat": 554, "jstatd": 554, @@ -15193,46 +15194,46 @@ "junctions_from_sam": 1, "junctools": 1, "jupiter": 1, - "jupyter": 157, - "jupyter-bundlerextension": 37, - "jupyter-console": 13, + "jupyter": 158, + "jupyter-bundlerextension": 38, + "jupyter-console": 14, "jupyter-contrib": 1, "jupyter-contrib-nbextension": 1, - "jupyter-dejavu": 23, - "jupyter-events": 3, - "jupyter-execute": 23, - "jupyter-kernel": 55, - "jupyter-kernelspec": 55, - "jupyter-lab": 3, - "jupyter-labextension": 3, - "jupyter-labhub": 3, - "jupyter-migrate": 157, - "jupyter-nbclassic": 3, - "jupyter-nbclassic-bundlerextension": 3, - "jupyter-nbclassic-extension": 3, - "jupyter-nbclassic-serverextension": 3, - "jupyter-nbconvert": 44, - "jupyter-nbextension": 37, + "jupyter-dejavu": 24, + "jupyter-events": 4, + "jupyter-execute": 24, + "jupyter-kernel": 56, + "jupyter-kernelspec": 56, + "jupyter-lab": 4, + "jupyter-labextension": 4, + "jupyter-labhub": 4, + "jupyter-migrate": 158, + "jupyter-nbclassic": 4, + "jupyter-nbclassic-bundlerextension": 4, + "jupyter-nbclassic-extension": 4, + "jupyter-nbclassic-serverextension": 4, + "jupyter-nbconvert": 45, + "jupyter-nbextension": 38, "jupyter-nbextensions_configurator": 1, - "jupyter-notebook": 39, + "jupyter-notebook": 40, "jupyter-qtconsole": 14, - "jupyter-run": 55, - "jupyter-server": 6, - "jupyter-serverextension": 37, - "jupyter-troubleshoot": 157, - "jupyter-trust": 150, + "jupyter-run": 56, + "jupyter-server": 7, + "jupyter-serverextension": 38, + "jupyter-troubleshoot": 158, + "jupyter-trust": 151, "just-first-key": 20, "just-top-hits": 19, "just_blast_test.pl": 1, "jwebserver": 50, - "k5srvutil": 5909, + "k5srvutil": 5910, "k8": 170, "k8-Linux": 1, "k_means": 1, "k_means_coefficient": 1, "k_neighbors": 1, "k_neighbors_coefficient": 1, - "kadmin": 5909, + "kadmin": 5910, "kadmin.local": 2, "kadmind": 2, "kaiju": 4, @@ -15327,7 +15328,7 @@ "kdbmeta.3.0.3": 1, "kdbmeta.3.1.0": 1, "kdbmeta.3.1.1": 1, - "kdestroy": 5909, + "kdestroy": 5910, "kea-config": 38, "keep-header": 1, "keep-ribo-periodic": 1, @@ -15338,7 +15339,7 @@ "keggcharter.py": 1, "keggpathway_map.py": 1, "keyFreq": 1, - "keyctl": 2538, + "keyctl": 2539, "keygen": 1, "keyring": 10, "keytool": 554, @@ -15369,7 +15370,7 @@ "kinSimRiboswitch": 1, "king": 1, "kingfisher": 1, - "kinit": 5909, + "kinit": 5910, "kinship-read": 1, "kinshipDecompose": 1, "kinwalker": 56, @@ -15382,7 +15383,7 @@ "kitsch": 10, "kitsune": 1, "kleborate": 1, - "klist": 5909, + "klist": 5910, "kma": 19, "kma_index": 19, "kma_shm": 19, @@ -15472,7 +15473,7 @@ "kp1mer_to_kmer.py": 1, "kp2np.py": 1, "kpal": 2, - "kpasswd": 5909, + "kpasswd": 5910, "kpileup.py": 1, "kprop": 2, "kpropd": 2, @@ -15519,7 +15520,7 @@ "krakenuniq-report": 1, "krakenuniq-translate": 1, "krakmeopen": 1, - "krb5-config": 5909, + "krb5-config": 5910, "krb5-send-pr": 2, "krb5kdc": 2, "kreport2krona.py": 3, @@ -15535,9 +15536,9 @@ "kseq_split": 1, "ksnp": 1, "kssd": 1, - "ksu": 5909, + "ksu": 5910, "ksw": 1, - "kswitch": 5909, + "kswitch": 5910, "ktClassifyBLAST": 17, "ktClassifyHits": 13, "ktGetContigMagnitudes": 17, @@ -15568,12 +15569,12 @@ "ktserver": 2, "kttimedmgr": 2, "kttimedtest": 2, - "ktutil": 5909, + "ktutil": 5910, "ktutilmgr": 2, "ktutilserv": 2, "ktutiltest": 2, "kubectl": 1, - "kvno": 5909, + "kvno": 5910, "kwip": 2, "kwip-stats": 2, "l4p-tmpl": 32, @@ -15731,8 +15732,8 @@ "libclair3.cpython-36m-x86_64-linux-gnu.so": 1, "libclair3.o": 1, "libclair3.so": 1, - "libdeflate-gunzip": 4224, - "libdeflate-gzip": 4224, + "libdeflate-gunzip": 4225, + "libdeflate-gzip": 4225, "libdrawgram.so": 5, "libdrawtree.so": 5, "libfile.pl": 1, @@ -15742,8 +15743,8 @@ "liblist.pl": 1, "liblist.pl.bak": 1, "libnetcfg": 1742, - "libpng-config": 5968, - "libpng16-config": 5968, + "libpng-config": 5969, + "libpng16-config": 5969, "libpypy-c.so": 1, "libpypy-c.so.debug": 1, "libpypy3-c.so.debug": 3, @@ -15803,7 +15804,7 @@ "link_ssv.py": 1, "linkage2allegro": 1, "linkhsp_unit_test": 5, - "linkicc": 1053, + "linkicc": 1054, "linknets": 2, "links2sql.pl": 7, "linksBed": 280, @@ -16081,8 +16082,8 @@ "lsmem": 13, "lsns": 13, "lss3": 29, - "lstopo": 92, - "lstopo-no-graphics": 92, + "lstopo": 93, + "lstopo-no-graphics": 93, "ltqnorm.pl": 1, "ltqnorm.pl.bak": 1, "ltr_finder": 3, @@ -16124,17 +16125,17 @@ "lz4_decompress": 2, "lz4c": 3544, "lz4cat": 3544, - "lzcat": 7708, - "lzcmp": 7708, - "lzdiff": 7708, - "lzegrep": 7708, - "lzfgrep": 7708, - "lzgrep": 7708, - "lzless": 7708, - "lzma": 7708, - "lzmadec": 7708, - "lzmainfo": 7708, - "lzmore": 7708, + "lzcat": 7709, + "lzcmp": 7709, + "lzdiff": 7709, + "lzegrep": 7709, + "lzfgrep": 7709, + "lzgrep": 7709, + "lzless": 7709, + "lzma": 7709, + "lzmadec": 7709, + "lzmainfo": 7709, + "lzmore": 7709, "lzop_build_offset_table.py": 60, "m-party": 1, "m-tx": 1, @@ -17972,7 +17973,7 @@ "nasm": 1, "nasp": 1, "native2ascii": 112, - "natsort": 169, + "natsort": 170, "nb-classify": 1, "nb-train": 1, "nbmodel_stan2.py": 1, @@ -18014,9 +18015,9 @@ "ncrf_to_bed": 2, "ncrf_to_bed.py": 2, "ncurses5-config": 565, - "ncurses6-config": 7177, + "ncurses6-config": 7178, "ncursesw5-config": 703, - "ncursesw6-config": 7178, + "ncursesw6-config": 7179, "ndg_httpclient": 2, "ndisasm": 1, "ndmetis": 60, @@ -18121,9 +18122,9 @@ "ngg_newman_watts_strogatz": 2, "ngg_path": 2, "ngg_ring_lattice": 2, - "nghttp": 4565, - "nghttpd": 4565, - "nghttpx": 4565, + "nghttp": 4566, + "nghttpd": 4566, + "nghttpx": 4566, "ngless": 2, "ngless-wrapped": 1, "nglview": 2, @@ -18236,6 +18237,7 @@ "nnrFilter": 1, "noah": 1, "node": 17, + "nodeenv": 1, "nodemutsel": 1, "nohead": 5, "nohtml": 27, @@ -18266,7 +18268,7 @@ "normalize_multicov.pl": 1, "normalize_oneD.R": 1, "normalize_table.py": 1, - "normalizer": 512, + "normalizer": 513, "normandcorrectwrapper.sh": 1, "nose2": 1, "nose2-2.7": 1, @@ -18370,7 +18372,7 @@ "nullarbor.pl": 1, "nulltype_module.py": 1, "numCI": 4, - "numba": 164, + "numba": 165, "number-lines": 1, "numfmt": 85, "numlines": 1, @@ -18659,12 +18661,12 @@ "openslide-quickhash1sum": 2, "openslide-show-properties": 2, "openslide-write-png": 2, - "openssl": 7952, + "openssl": 7953, "opentargets_validator": 1, "operation.py": 1, - "opj_compress": 694, - "opj_decompress": 694, - "opj_dump": 694, + "opj_compress": 695, + "opj_decompress": 695, + "opj_dump": 695, "opl2ofm": 1, "opsin": 1, "opt": 6, @@ -18749,6 +18751,8 @@ "oshfort": 49, "oshmem_info": 49, "oshrun": 49, + "osqp_demo": 1, + "osqp_tester": 1, "osra": 1, "ossolverservice": 2, "ostir": 2, @@ -18904,7 +18908,7 @@ "pairtools": 3, "pairwise_comparison": 1, "pal2nal.pl": 9, - "pal2rgb": 5321, + "pal2rgb": 5322, "pal_finder": 1, "paladin": 2, "palindrome": 27, @@ -19829,10 +19833,10 @@ "pints_caller": 1, "pints_normalizer": 1, "pints_visualizer": 1, - "pip": 3820, + "pip": 3821, "pip2": 1, "pip2.7": 1, - "pip3": 2743, + "pip3": 2744, "pipdeptree": 1, "pipelign": 1, "pipeline.py": 3, @@ -20192,9 +20196,9 @@ "pmxmutate": 1, "pn2pdf": 1, "pneumo-typer": 1, - "png-fix-itxt": 5968, + "png-fix-itxt": 5969, "pngcp": 89, - "pngfix": 5968, + "pngfix": 5969, "pngtogd": 243, "pngtogd2": 243, "pnps-gen": 1, @@ -20315,7 +20319,7 @@ "ppi2html": 2, "pplacer": 22, "ppltotf": 1, - "ppm2tiff": 5321, + "ppm2tiff": 5322, "pprodigal": 2, "pprof": 2, "pprof-symbolize": 1, @@ -20328,6 +20332,7 @@ "pqstat": 1, "pr": 85, "prank": 17, + "pre-commit": 1, "pre.py": 1, "preTA": 2, "pre_STAR.py": 1, @@ -20744,7 +20749,7 @@ "psiblast": 350, "psiblast_iteration_unit_test": 5, "psiblast_unit_test": 5, - "psicc": 1053, + "psicc": 1054, "psiclass": 1, "psiphi": 27, "psirc": 1, @@ -20955,7 +20960,7 @@ "pyami_sendmail": 29, "pyaml": 3, "pyatac": 1, - "pybabel": 49, + "pybabel": 50, "pybam.py": 1, "pybarrnap": 1, "pybed2GTF.py": 1, @@ -20984,8 +20989,8 @@ "pydemult": 1, "pydicom": 1, "pydna_repeatfinder": 1, - "pydoc": 3819, - "pydoc3": 3486, + "pydoc": 3820, + "pydoc3": 3487, "pydoc3.10": 831, "pydoc3.11": 283, "pydoc3.12": 290, @@ -20995,7 +21000,7 @@ "pydoc3.6": 344, "pydoc3.7": 383, "pydoc3.8": 578, - "pydoc3.9": 660, + "pydoc3.9": 661, "pydownsampler": 1, "pyega3": 1, "pyemojify": 1, @@ -21010,13 +21015,13 @@ "pyflyte-execute": 1, "pyflyte-fast-execute": 1, "pyflyte-map-execute": 1, - "pyftmerge": 440, - "pyftsubset": 440, + "pyftmerge": 441, + "pyftsubset": 441, "pygal_gen.py": 2, "pygcap": 1, "pygenetic_code": 1, "pygmentex": 1, - "pygmentize": 276, + "pygmentize": 277, "pygmes": 1, "pygrun": 1, "pygtail": 2, @@ -21030,7 +21035,7 @@ "pyi-makespec": 1, "pyi-set_version": 1, "pyinstaller": 1, - "pyjson5": 4, + "pyjson5": 5, "pyjwt": 4, "pykofamsearch": 1, "pykwalify": 1, @@ -21119,7 +21124,7 @@ "pytest": 151, "pytest-benchmark": 1, "pythia8-config": 1, - "python": 3820, + "python": 3821, "python-argcomplete-check-easy-install-script": 347, "python-argcomplete-tcsh": 191, "python-build": 2, @@ -21130,8 +21135,8 @@ "python2.5-config": 1, "python2.7": 333, "python2.7-config": 316, - "python3": 3487, - "python3-config": 3486, + "python3": 3488, + "python3-config": 3487, "python3.1": 1412, "python3.10": 831, "python3.10-config": 831, @@ -21159,8 +21164,8 @@ "python3.7m-config": 383, "python3.8": 578, "python3.8-config": 578, - "python3.9": 660, - "python3.9-config": 660, + "python3.9": 661, + "python3.9-config": 661, "pythonsh": 2, "pythontex": 1, "pytleap": 6, @@ -21483,7 +21488,7 @@ "ratt": 2, "rav1e": 12, "raven": 4, - "raw2tiff": 5321, + "raw2tiff": 5322, "raw_n50": 10, "raw_n50.o": 10, "raw_vcf_parse.py": 1, @@ -21551,7 +21556,7 @@ "rdfgraphisomorphism": 34, "rdfpipe": 34, "rdfs2dot": 34, - "rdjpgcom": 5849, + "rdjpgcom": 5850, "rdkit2fps": 1, "rdma_client": 25, "rdma_server": 25, @@ -22020,7 +22025,7 @@ "rescue_fusion.py": 1, "reseq": 1, "reseq-prepare-names.py": 1, - "reset": 7884, + "reset": 7885, "resetFragLibrary": 2, "reset_array.pl": 1, "reset_experiment.pl": 1, @@ -22471,6 +22476,7 @@ "runTest": 2, "runTestCases.sh": 1, "runVSClust.R": 1, + "run_AmpliCI": 1, "run_BUSCO.py": 3, "run_CQ-PM_mine.sh": 2, "run_CQ-PM_stranded.sh": 2, @@ -22638,7 +22644,7 @@ "runsge": 2, "runsge0": 1, "runshell": 1, - "runxlrd.py": 20, + "runxlrd.py": 21, "rust-demangler": 1, "rust-gdb": 1, "rust-gdbgui": 1, @@ -22938,7 +22944,7 @@ "scancel-range": 1, "scancel_range.py": 1, "scandeps.pl": 2, - "scanpy": 57, + "scanpy": 58, "scanpy-cli": 1, "scanpy-filter-cells": 1, "scanpy-filter-genes": 1, @@ -23011,7 +23017,7 @@ "scitokens-test-access": 1, "scitokens-verify": 1, "sclass.X86_64.LINUX": 1, - "sclient": 5909, + "sclient": 5910, "sclust_summary.sh": 1, "scluster": 3, "scmap-cli-post-install-tests.bats": 1, @@ -23214,7 +23220,7 @@ "selenium-manager": 1, "selscan": 1, "sem": 109, - "send2trash": 21, + "send2trash": 22, "sendsketch.sh": 31, "senergy": 6, "sensv": 1, @@ -23545,7 +23551,7 @@ "sim-cover2": 2, "sim-shotgun": 2, "sim4db": 3, - "sim_client": 5909, + "sim_client": 5910, "sim_reads": 10, "sim_reads.o": 10, "sim_reads_tran": 10, @@ -24136,7 +24142,7 @@ "sqlformat": 9, "sqlite.pl": 1, "sqlite3": 2726, - "sqlite3_analyzer": 7273, + "sqlite3_analyzer": 7274, "sqlitebrowser": 1, "sqlmetal": 16, "sqlsharp": 16, @@ -24774,7 +24780,7 @@ "tableschema": 1, "tablet": 1, "tabnum2id": 1, - "tabs": 7884, + "tabs": 7885, "tabulate": 143, "tabulate.py": 1, "tabulator": 1, @@ -24948,9 +24954,9 @@ "tbvcfreport": 1, "tcdemux": 1, "tcfinder": 1, - "tclsh": 7510, + "tclsh": 7511, "tclsh8.5": 473, - "tclsh8.6": 7273, + "tclsh8.6": 7274, "tcode": 27, "tcsh": 3, "td_bignet": 2, @@ -25154,7 +25160,7 @@ "tiara-test": 2, "tiberius": 1, "tiberius.py": 1, - "tic": 7884, + "tic": 7885, "tiddit": 1, "tides": 1, "tidk": 1, @@ -25162,23 +25168,23 @@ "tidygff3": 1, "tidyp": 66, "tie": 1, - "tiff2bw": 5321, + "tiff2bw": 5322, "tiff2fsspec": 23, - "tiff2pdf": 5321, - "tiff2ps": 5321, - "tiff2rgba": 5321, - "tiffcmp": 5321, + "tiff2pdf": 5322, + "tiff2ps": 5322, + "tiff2rgba": 5322, + "tiffcmp": 5322, "tiffcomment": 25, - "tiffcp": 5595, - "tiffcrop": 5321, - "tiffdither": 5321, - "tiffdump": 5595, + "tiffcp": 5596, + "tiffcrop": 5322, + "tiffdither": 5322, + "tiffdump": 5596, "tifffile": 28, - "tiffinfo": 5595, - "tiffmedian": 5321, - "tiffset": 5595, - "tiffsplit": 5595, - "tificc": 1053, + "tiffinfo": 5596, + "tiffmedian": 5322, + "tiffset": 5596, + "tiffsplit": 5596, + "tificc": 1054, "tigStore": 3, "tiger-hash": 11, "tigge_check": 1, @@ -25232,7 +25238,7 @@ "titan-gc-prepare.py": 1, "titan.py": 1, "titration": 2, - "tjbench": 468, + "tjbench": 469, "tkconch": 1, "tkpp": 1, "tksm": 1, @@ -25263,7 +25269,7 @@ "to_upper_case.pl.bak": 1, "toco": 80, "toco_from_protos": 80, - "toe": 7884, + "toe": 7885, "tohnsw": 1, "toil": 3, "toil-cwl-runner": 3, @@ -25316,8 +25322,8 @@ "tpp_hostname": 2, "tpp_models.pl": 2, "tpptray.bat": 2, - "tput": 7884, - "tqdm": 394, + "tput": 7885, + "tqdm": 395, "tr": 85, "tr-trimmer": 1, "trace_comment": 2, @@ -25391,7 +25397,7 @@ "transform_gfa.py": 1, "transformers-cli": 4, "transformseq": 13, - "transicc": 1053, + "transicc": 1054, "transit": 1, "transition_counter": 1, "transl": 1, @@ -25547,7 +25553,7 @@ "tryptic.py": 1, "ts": 3, "tsebra.py": 3, - "tset": 7884, + "tset": 7885, "tskit": 7, "tsort": 85, "tsp": 2, @@ -25583,7 +25589,7 @@ "tth-hash": 11, "ttree": 66, "tts": 5, - "ttx": 440, + "ttx": 441, "tty": 85, "tune": 1, "turbocor": 1, @@ -25728,7 +25734,7 @@ "unix2mac": 2, "unlink": 85, "unlz4": 3544, - "unlzma": 7708, + "unlzma": 7709, "unmapped2anchors.py": 1, "unmerge": 1, "unmerge-paired-reads.sh": 2, @@ -25746,7 +25752,7 @@ "unstarch-typical": 15, "untangle": 2, "unweight_fasta.py": 1, - "unxz": 7933, + "unxz": 7934, "unzip": 32, "unzip.sh": 30, "unziphdf5": 1, @@ -25754,7 +25760,7 @@ "unzipont": 1, "unzipont_dir": 1, "unzipsfx": 25, - "unzstd": 5337, + "unzstd": 5338, "update-blastdb.py": 2, "update-serotypefinder-db": 1, "update-sort-bed-migrate-candidates": 15, @@ -25828,7 +25834,7 @@ "utmpdump": 13, "utrgff2gbrowse.pl": 15, "utrrnaseq": 13, - "uuclient": 5909, + "uuclient": 5910, "uuid": 38, "uuid-config": 38, "uuidgen": 13, @@ -26349,7 +26355,7 @@ "virsorter": 1, "virstrain": 1, "virstrain_build": 1, - "virtualenv": 8, + "virtualenv": 9, "virtualenv-pypy": 1, "virulencefinder.py": 1, "virulign": 1, @@ -26535,7 +26541,7 @@ "wham": 1, "whamg": 1, "whatshap": 14, - "wheel": 3809, + "wheel": 3810, "wheezy.template": 2, "whereis": 13, "which": 1, @@ -26580,9 +26586,9 @@ "winnowmap": 3, "wiq.py": 1, "wisestork": 1, - "wish": 7510, + "wish": 7511, "wish8.5": 473, - "wish8.6": 7273, + "wish8.6": 7274, "wkhtmltoimage": 2, "wkhtmltopdf": 2, "wlmscpfs": 1, @@ -26633,12 +26639,12 @@ "write_tfrecord_species.py": 1, "writedb_entry": 1, "writedb_unit_test": 5, - "wrjpgcom": 5849, + "wrjpgcom": 5850, "ws": 2, "wsdl": 16, "wsdl2": 16, "wsdl2h": 1, - "wsdump": 13, + "wsdump": 14, "wsdump.py": 8, "wsgen": 117, "wsimport": 117, @@ -26699,7 +26705,7 @@ "x86_64-conda-linux-gnu-gfortran": 3363, "x86_64-conda-linux-gnu-gfortran.bin": 575, "x86_64-conda-linux-gnu-gprof": 3401, - "x86_64-conda-linux-gnu-ld": 5662, + "x86_64-conda-linux-gnu-ld": 5663, "x86_64-conda-linux-gnu-ld.bfd": 3401, "x86_64-conda-linux-gnu-ld.gold": 3401, "x86_64-conda-linux-gnu-nm": 3401, @@ -26735,7 +26741,7 @@ "x86_64-conda_cos6-linux-gnu-gfortran": 4132, "x86_64-conda_cos6-linux-gnu-gfortran.bin": 1344, "x86_64-conda_cos6-linux-gnu-gprof": 4168, - "x86_64-conda_cos6-linux-gnu-ld": 6496, + "x86_64-conda_cos6-linux-gnu-ld": 6497, "x86_64-conda_cos6-linux-gnu-ld.bfd": 4168, "x86_64-conda_cos6-linux-gnu-ld.gold": 4168, "x86_64-conda_cos6-linux-gnu-nm": 4168, @@ -26788,7 +26794,7 @@ "xmfa2maf": 4, "xmfa2maf.pl": 1, "xml": 1, - "xml2-config": 5451, + "xml2-config": 5452, "xml2-config.bak": 34, "xml2dcm": 1, "xml2dsr": 1, @@ -26801,10 +26807,10 @@ "xml_spellcheck": 64, "xml_split": 64, "xml_to_bas.pl": 3, - "xmlcatalog": 5451, + "xmlcatalog": 5452, "xmlget": 23, "xmlindent": 1, - "xmllint": 5451, + "xmllint": 5452, "xmlpatterns": 255, "xmlpatterns-qt4": 3, "xmlpatternsvalidator": 255, @@ -26869,16 +26875,16 @@ "xy-plot": 88, "xyalign": 1, "xyz_sfetch": 1, - "xz": 7933, - "xzcat": 7708, - "xzcmp": 7708, - "xzdec": 7708, - "xzdiff": 7708, - "xzegrep": 7708, - "xzfgrep": 7708, - "xzgrep": 7708, - "xzless": 7708, - "xzmore": 7708, + "xz": 7934, + "xzcat": 7709, + "xzcmp": 7709, + "xzdec": 7709, + "xzdiff": 7709, + "xzegrep": 7709, + "xzfgrep": 7709, + "xzgrep": 7709, + "xzless": 7709, + "xzmore": 7709, "y2racc": 7, "yacc": 4, "yacht": 1, @@ -26966,10 +26972,10 @@ "zrun": 3, "zsh": 3, "zsh-5.8": 3, - "zstd": 5337, - "zstdcat": 5337, - "zstdgrep": 5135, - "zstdless": 5135, - "zstdmt": 5337, + "zstd": 5338, + "zstdcat": 5338, + "zstdgrep": 5136, + "zstdless": 5136, + "zstdmt": 5338, "ztr_dump": 2 } \ No newline at end of file diff --git a/quay.io/biocontainers/a/amplici:2.2--hd50232a_0.json b/quay.io/biocontainers/a/amplici:2.2--hd50232a_0.json new file mode 100644 index 0000000..3d4fec6 --- /dev/null +++ b/quay.io/biocontainers/a/amplici:2.2--hd50232a_0.json @@ -0,0 +1,3 @@ +{ + "run_AmpliCI": "/usr/local/bin/run_AmpliCI" +} \ No newline at end of file diff --git a/quay.io/biocontainers/l/liana:1.4.0--pyhdfd78af_0.json b/quay.io/biocontainers/l/liana:1.4.0--pyhdfd78af_0.json new file mode 100644 index 0000000..ae955aa --- /dev/null +++ b/quay.io/biocontainers/l/liana:1.4.0--pyhdfd78af_0.json @@ -0,0 +1,241 @@ +{ + "2to3": "/usr/local/bin/2to3", + "2to3-3.9": "/usr/local/bin/2to3-3.9", + "adig": "/usr/local/bin/adig", + "ahost": "/usr/local/bin/ahost", + "brotli": "/usr/local/bin/brotli", + "bunzip2": "/usr/local/bin/bunzip2", + "bzcat": "/usr/local/bin/bzcat", + "bzcmp": "/usr/local/bin/bzcmp", + "bzdiff": "/usr/local/bin/bzdiff", + "bzegrep": "/usr/local/bin/bzegrep", + "bzfgrep": "/usr/local/bin/bzfgrep", + "bzgrep": "/usr/local/bin/bzgrep", + "bzip2": "/usr/local/bin/bzip2", + "bzip2recover": "/usr/local/bin/bzip2recover", + "bzless": "/usr/local/bin/bzless", + "bzmore": "/usr/local/bin/bzmore", + "c_rehash": "/usr/local/bin/c_rehash", + "captoinfo": "/usr/local/bin/captoinfo", + "cbc": "/usr/local/bin/cbc", + "cjpeg": "/usr/local/bin/cjpeg", + "clear": "/usr/local/bin/clear", + "clp": "/usr/local/bin/clp", + "compile_et": "/usr/local/bin/compile_et", + "curl-config": "/usr/local/bin/curl-config", + "curve_keygen": "/usr/local/bin/curve_keygen", + "debugpy": "/usr/local/bin/debugpy", + "djpeg": "/usr/local/bin/djpeg", + "f2py": "/usr/local/bin/f2py", + "fax2ps": "/usr/local/bin/fax2ps", + "fax2tiff": "/usr/local/bin/fax2tiff", + "fonttools": "/usr/local/bin/fonttools", + "freetype-config": "/usr/local/bin/freetype-config", + "gif2h5": "/usr/local/bin/gif2h5", + "gseapy": "/usr/local/bin/gseapy", + "gss-client": "/usr/local/bin/gss-client", + "h52gif": "/usr/local/bin/h52gif", + "h5c++": "/usr/local/bin/h5c++", + "h5cc": "/usr/local/bin/h5cc", + "h5clear": "/usr/local/bin/h5clear", + "h5copy": "/usr/local/bin/h5copy", + "h5debug": "/usr/local/bin/h5debug", + "h5delete": "/usr/local/bin/h5delete", + "h5diff": "/usr/local/bin/h5diff", + "h5dump": "/usr/local/bin/h5dump", + "h5fc": "/usr/local/bin/h5fc", + "h5format_convert": "/usr/local/bin/h5format_convert", + "h5fuse.sh": "/usr/local/bin/h5fuse.sh", + "h5import": "/usr/local/bin/h5import", + "h5jam": "/usr/local/bin/h5jam", + "h5ls": "/usr/local/bin/h5ls", + "h5mkgrp": "/usr/local/bin/h5mkgrp", + "h5perf_serial": "/usr/local/bin/h5perf_serial", + "h5redeploy": "/usr/local/bin/h5redeploy", + "h5repack": "/usr/local/bin/h5repack", + "h5repart": "/usr/local/bin/h5repart", + "h5stat": "/usr/local/bin/h5stat", + "h5tools_test_utils": "/usr/local/bin/h5tools_test_utils", + "h5unjam": "/usr/local/bin/h5unjam", + "h5watch": "/usr/local/bin/h5watch", + "httpx": "/usr/local/bin/httpx", + "hwloc-annotate": "/usr/local/bin/hwloc-annotate", + "hwloc-bind": "/usr/local/bin/hwloc-bind", + "hwloc-calc": "/usr/local/bin/hwloc-calc", + "hwloc-compress-dir": "/usr/local/bin/hwloc-compress-dir", + "hwloc-diff": "/usr/local/bin/hwloc-diff", + "hwloc-distrib": "/usr/local/bin/hwloc-distrib", + "hwloc-gather-cpuid": "/usr/local/bin/hwloc-gather-cpuid", + "hwloc-gather-topology": "/usr/local/bin/hwloc-gather-topology", + "hwloc-info": "/usr/local/bin/hwloc-info", + "hwloc-ls": "/usr/local/bin/hwloc-ls", + "hwloc-patch": "/usr/local/bin/hwloc-patch", + "hwloc-ps": "/usr/local/bin/hwloc-ps", + "hypothesis": "/usr/local/bin/hypothesis", + "identify-cli": "/usr/local/bin/identify-cli", + "idle3": "/usr/local/bin/idle3", + "idle3.9": "/usr/local/bin/idle3.9", + "infocmp": "/usr/local/bin/infocmp", + "infotocap": "/usr/local/bin/infotocap", + "ipython": "/usr/local/bin/ipython", + "ipython3": "/usr/local/bin/ipython3", + "jlpm": "/usr/local/bin/jlpm", + "jpegtran": "/usr/local/bin/jpegtran", + "jpgicc": "/usr/local/bin/jpgicc", + "jsonpointer": "/usr/local/bin/jsonpointer", + "jsonschema": "/usr/local/bin/jsonschema", + "jupyter": "/usr/local/bin/jupyter", + "jupyter-bundlerextension": "/usr/local/bin/jupyter-bundlerextension", + "jupyter-console": "/usr/local/bin/jupyter-console", + "jupyter-dejavu": "/usr/local/bin/jupyter-dejavu", + "jupyter-events": "/usr/local/bin/jupyter-events", + "jupyter-execute": "/usr/local/bin/jupyter-execute", + "jupyter-kernel": "/usr/local/bin/jupyter-kernel", + "jupyter-kernelspec": "/usr/local/bin/jupyter-kernelspec", + "jupyter-lab": "/usr/local/bin/jupyter-lab", + "jupyter-labextension": "/usr/local/bin/jupyter-labextension", + "jupyter-labhub": "/usr/local/bin/jupyter-labhub", + "jupyter-migrate": "/usr/local/bin/jupyter-migrate", + "jupyter-nbclassic": "/usr/local/bin/jupyter-nbclassic", + "jupyter-nbclassic-bundlerextension": "/usr/local/bin/jupyter-nbclassic-bundlerextension", + "jupyter-nbclassic-extension": "/usr/local/bin/jupyter-nbclassic-extension", + "jupyter-nbclassic-serverextension": "/usr/local/bin/jupyter-nbclassic-serverextension", + "jupyter-nbconvert": "/usr/local/bin/jupyter-nbconvert", + "jupyter-nbextension": "/usr/local/bin/jupyter-nbextension", + "jupyter-notebook": "/usr/local/bin/jupyter-notebook", + "jupyter-run": "/usr/local/bin/jupyter-run", + "jupyter-server": "/usr/local/bin/jupyter-server", + "jupyter-serverextension": "/usr/local/bin/jupyter-serverextension", + "jupyter-troubleshoot": "/usr/local/bin/jupyter-troubleshoot", + "jupyter-trust": "/usr/local/bin/jupyter-trust", + "k5srvutil": "/usr/local/bin/k5srvutil", + "kadmin": "/usr/local/bin/kadmin", + "kdestroy": "/usr/local/bin/kdestroy", + "keyctl": "/usr/local/bin/keyctl", + "kinit": "/usr/local/bin/kinit", + "klist": "/usr/local/bin/klist", + "kpasswd": "/usr/local/bin/kpasswd", + "krb5-config": "/usr/local/bin/krb5-config", + "ksu": "/usr/local/bin/ksu", + "kswitch": "/usr/local/bin/kswitch", + "ktutil": "/usr/local/bin/ktutil", + "kvno": "/usr/local/bin/kvno", + "libdeflate-gunzip": "/usr/local/bin/libdeflate-gunzip", + "libdeflate-gzip": "/usr/local/bin/libdeflate-gzip", + "libpng-config": "/usr/local/bin/libpng-config", + "libpng16-config": "/usr/local/bin/libpng16-config", + "linkicc": "/usr/local/bin/linkicc", + "lstopo": "/usr/local/bin/lstopo", + "lstopo-no-graphics": "/usr/local/bin/lstopo-no-graphics", + "lzcat": "/usr/local/bin/lzcat", + "lzcmp": "/usr/local/bin/lzcmp", + "lzdiff": "/usr/local/bin/lzdiff", + "lzegrep": "/usr/local/bin/lzegrep", + "lzfgrep": "/usr/local/bin/lzfgrep", + "lzgrep": "/usr/local/bin/lzgrep", + "lzless": "/usr/local/bin/lzless", + "lzma": "/usr/local/bin/lzma", + "lzmadec": "/usr/local/bin/lzmadec", + "lzmainfo": "/usr/local/bin/lzmainfo", + "lzmore": "/usr/local/bin/lzmore", + "natsort": "/usr/local/bin/natsort", + "ncurses6-config": "/usr/local/bin/ncurses6-config", + "ncursesw6-config": "/usr/local/bin/ncursesw6-config", + "nghttp": "/usr/local/bin/nghttp", + "nghttpd": "/usr/local/bin/nghttpd", + "nghttpx": "/usr/local/bin/nghttpx", + "nodeenv": "/usr/local/bin/nodeenv", + "normalizer": "/usr/local/bin/normalizer", + "numba": "/usr/local/bin/numba", + "openssl": "/usr/local/bin/openssl", + "opj_compress": "/usr/local/bin/opj_compress", + "opj_decompress": "/usr/local/bin/opj_decompress", + "opj_dump": "/usr/local/bin/opj_dump", + "osqp_demo": "/usr/local/bin/osqp_demo", + "osqp_tester": "/usr/local/bin/osqp_tester", + "pal2rgb": "/usr/local/bin/pal2rgb", + "pip": "/usr/local/bin/pip", + "pip3": "/usr/local/bin/pip3", + "png-fix-itxt": "/usr/local/bin/png-fix-itxt", + "pngfix": "/usr/local/bin/pngfix", + "ppm2tiff": "/usr/local/bin/ppm2tiff", + "pre-commit": "/usr/local/bin/pre-commit", + "psicc": "/usr/local/bin/psicc", + "pybabel": "/usr/local/bin/pybabel", + "pydoc": "/usr/local/bin/pydoc", + "pydoc3": "/usr/local/bin/pydoc3", + "pydoc3.9": "/usr/local/bin/pydoc3.9", + "pyftmerge": "/usr/local/bin/pyftmerge", + "pyftsubset": "/usr/local/bin/pyftsubset", + "pygmentize": "/usr/local/bin/pygmentize", + "pyjson5": "/usr/local/bin/pyjson5", + "python": "/usr/local/bin/python", + "python3": "/usr/local/bin/python3", + "python3-config": "/usr/local/bin/python3-config", + "python3.9": "/usr/local/bin/python3.9", + "python3.9-config": "/usr/local/bin/python3.9-config", + "raw2tiff": "/usr/local/bin/raw2tiff", + "rdjpgcom": "/usr/local/bin/rdjpgcom", + "reset": "/usr/local/bin/reset", + "runxlrd.py": "/usr/local/bin/runxlrd.py", + "scanpy": "/usr/local/bin/scanpy", + "sclient": "/usr/local/bin/sclient", + "send2trash": "/usr/local/bin/send2trash", + "sim_client": "/usr/local/bin/sim_client", + "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer", + "tabs": "/usr/local/bin/tabs", + "tclsh": "/usr/local/bin/tclsh", + "tclsh8.6": "/usr/local/bin/tclsh8.6", + "tic": "/usr/local/bin/tic", + "tiff2bw": "/usr/local/bin/tiff2bw", + "tiff2pdf": "/usr/local/bin/tiff2pdf", + "tiff2ps": "/usr/local/bin/tiff2ps", + "tiff2rgba": "/usr/local/bin/tiff2rgba", + "tiffcmp": "/usr/local/bin/tiffcmp", + "tiffcp": "/usr/local/bin/tiffcp", + "tiffcrop": "/usr/local/bin/tiffcrop", + "tiffdither": "/usr/local/bin/tiffdither", + "tiffdump": "/usr/local/bin/tiffdump", + "tiffinfo": "/usr/local/bin/tiffinfo", + "tiffmedian": "/usr/local/bin/tiffmedian", + "tiffset": "/usr/local/bin/tiffset", + "tiffsplit": "/usr/local/bin/tiffsplit", + "tificc": "/usr/local/bin/tificc", + "tjbench": "/usr/local/bin/tjbench", + "toe": "/usr/local/bin/toe", + "tput": "/usr/local/bin/tput", + "tqdm": "/usr/local/bin/tqdm", + "transicc": "/usr/local/bin/transicc", + "tset": "/usr/local/bin/tset", + "ttx": "/usr/local/bin/ttx", + "unlzma": "/usr/local/bin/unlzma", + "unxz": "/usr/local/bin/unxz", + "unzstd": "/usr/local/bin/unzstd", + "uuclient": "/usr/local/bin/uuclient", + "virtualenv": "/usr/local/bin/virtualenv", + "wheel": "/usr/local/bin/wheel", + "wish": "/usr/local/bin/wish", + "wish8.6": "/usr/local/bin/wish8.6", + "wrjpgcom": "/usr/local/bin/wrjpgcom", + "wsdump": "/usr/local/bin/wsdump", + "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld", + "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld", + "xml2-config": "/usr/local/bin/xml2-config", + "xmlcatalog": "/usr/local/bin/xmlcatalog", + "xmllint": "/usr/local/bin/xmllint", + "xz": "/usr/local/bin/xz", + "xzcat": "/usr/local/bin/xzcat", + "xzcmp": "/usr/local/bin/xzcmp", + "xzdec": "/usr/local/bin/xzdec", + "xzdiff": "/usr/local/bin/xzdiff", + "xzegrep": "/usr/local/bin/xzegrep", + "xzfgrep": "/usr/local/bin/xzfgrep", + "xzgrep": "/usr/local/bin/xzgrep", + "xzless": "/usr/local/bin/xzless", + "xzmore": "/usr/local/bin/xzmore", + "zstd": "/usr/local/bin/zstd", + "zstdcat": "/usr/local/bin/zstdcat", + "zstdgrep": "/usr/local/bin/zstdgrep", + "zstdless": "/usr/local/bin/zstdless", + "zstdmt": "/usr/local/bin/zstdmt" +} \ No newline at end of file