From bb4eb7a9a32a0740c7c222b0d2f3d278463aca3f Mon Sep 17 00:00:00 2001
From: github-actions <github-actions@users.noreply.github.com>
Date: Mon, 12 Feb 2024 00:48:48 +0000
Subject: [PATCH] Automated deployment with updated cache 2024-02-12

---
 counts.json                                   | 1459 +++++++++--------
 .../b/bigtools:0.4.1--h031d066_0.json         |   13 +
 .../g/gametes:2.1--py310h7cba7a3_0.json       |  214 +++
 .../g/gffpandas:1.2.2--pyhdfd78af_0.json      |   75 +
 .../g/graphembed:0.1.0--hdbdd923_0.json       |    4 +
 .../g/gxf2bed:0.1.0--h4ac6f70_0.json          |    4 +
 .../h/hmftools-cuppa:1.8.1--hdfd78af_0.json   |  303 ++++
 .../h/hmftools-mark-dups:1.1--hdfd78af_0.json |  233 +++
 .../m/msfragger:4.0--py312hdfd78af_0.json     |  309 ++++
 .../m/multirnafold:2.1--h4ac6f70_0.json       |    9 +
 .../n/ntsynt:1.0.0--py39h1f90b4d_0.json       |  298 ++++
 .../biocontainers/p/peer:1.3--hdbdd923_0.json |    4 +
 .../p/pybigtools:0.1.0--py38h61b5871_0.json   |   76 +
 .../p/pytransaln:0.2.1--pyh7cba7a3_0.json     |  113 ++
 .../r/r-linxreport:1.0.0--r43hdfd78af_0.json  |  237 +++
 .../r/r-scevan:1.0.1--r43hdfd78af_0.json      |  263 +++
 .../s/seqnado:0.4.1--pyhdfd78af_0.json        |  217 +++
 .../t/taxor:0.1.1--hc155240_0.json            |  175 ++
 18 files changed, 3302 insertions(+), 704 deletions(-)
 create mode 100644 quay.io/biocontainers/b/bigtools:0.4.1--h031d066_0.json
 create mode 100644 quay.io/biocontainers/g/gametes:2.1--py310h7cba7a3_0.json
 create mode 100644 quay.io/biocontainers/g/gffpandas:1.2.2--pyhdfd78af_0.json
 create mode 100644 quay.io/biocontainers/g/graphembed:0.1.0--hdbdd923_0.json
 create mode 100644 quay.io/biocontainers/g/gxf2bed:0.1.0--h4ac6f70_0.json
 create mode 100644 quay.io/biocontainers/h/hmftools-cuppa:1.8.1--hdfd78af_0.json
 create mode 100644 quay.io/biocontainers/h/hmftools-mark-dups:1.1--hdfd78af_0.json
 create mode 100644 quay.io/biocontainers/m/msfragger:4.0--py312hdfd78af_0.json
 create mode 100644 quay.io/biocontainers/m/multirnafold:2.1--h4ac6f70_0.json
 create mode 100644 quay.io/biocontainers/n/ntsynt:1.0.0--py39h1f90b4d_0.json
 create mode 100644 quay.io/biocontainers/p/peer:1.3--hdbdd923_0.json
 create mode 100644 quay.io/biocontainers/p/pybigtools:0.1.0--py38h61b5871_0.json
 create mode 100644 quay.io/biocontainers/p/pytransaln:0.2.1--pyh7cba7a3_0.json
 create mode 100644 quay.io/biocontainers/r/r-linxreport:1.0.0--r43hdfd78af_0.json
 create mode 100644 quay.io/biocontainers/r/r-scevan:1.0.1--r43hdfd78af_0.json
 create mode 100644 quay.io/biocontainers/s/seqnado:0.4.1--pyhdfd78af_0.json
 create mode 100644 quay.io/biocontainers/t/taxor:0.1.1--hc155240_0.json

diff --git a/counts.json b/counts.json
index fb09a07..d3567bb 100644
--- a/counts.json
+++ b/counts.json
@@ -2326,16 +2326,16 @@
     "2csfastq_1csfastq": 1,
     "2ft": 2,
     "2ndscore": 1,
-    "2to3": 3532,
-    "2to3-3.10": 773,
-    "2to3-3.11": 255,
-    "2to3-3.12": 127,
+    "2to3": 3541,
+    "2to3-3.10": 775,
+    "2to3-3.11": 256,
+    "2to3-3.12": 131,
     "2to3-3.4": 6,
     "2to3-3.5": 103,
     "2to3-3.6": 341,
     "2to3-3.7": 382,
-    "2to3-3.8": 570,
-    "2to3-3.9": 645,
+    "2to3-3.8": 571,
+    "2to3-3.9": 646,
     "3EdgeTests": 1,
     "3_1_filter_mapQ_for_sam.pl": 1,
     "3seq": 1,
@@ -3875,7 +3875,7 @@
     "QueueingSystem.dll": 1,
     "QuickDeconvolution": 1,
     "QuickSNP.py": 1,
-    "R": 4635,
+    "R": 4638,
     "R-scape": 2,
     "R-scape-sim": 2,
     "R-scape-sim-nobps": 2,
@@ -4101,7 +4101,7 @@
     "Rprof": 1,
     "Rsample": 4,
     "Rsample-smp": 4,
-    "Rscript": 4636,
+    "Rscript": 4639,
     "RunTHetA.py": 1,
     "SAGE": 1,
     "SAMMPileUpReader.py": 1,
@@ -4873,7 +4873,7 @@
     "acdvalid": 23,
     "ace.pl": 56,
     "ace2contig": 2,
-    "ace2sam": 492,
+    "ace2sam": 494,
     "aci": 1,
     "aclocal.bak": 11,
     "acountry": 4272,
@@ -4887,7 +4887,7 @@
     "actc": 1,
     "action_report.py": 1,
     "activate": 1342,
-    "activate-global-python-argcomplete": 334,
+    "activate-global-python-argcomplete": 335,
     "acyclic": 198,
     "adVNTR-Filtering": 1,
     "ada_model_builder_ntChange.R": 1,
@@ -4962,7 +4962,7 @@
     "addtit.pl": 2,
     "adf_checker.pl": 1,
     "adhocfilelist": 1,
-    "adig": 4430,
+    "adig": 4437,
     "adjustPeakFile.pl": 5,
     "adjustRedunGroupFile.pl": 5,
     "adjustScanRankerScoreByGroup": 2,
@@ -5078,7 +5078,7 @@
     "agrvate": 1,
     "agtsampleinforw.dll": 2,
     "ahmm-s": 1,
-    "ahost": 4430,
+    "ahost": 4437,
     "airr-tools": 5,
     "akita_data.py": 1,
     "akita_data_read.py": 1,
@@ -5091,8 +5091,8 @@
     "akita_test.py": 1,
     "akita_train.py": 1,
     "akt": 1,
-    "al": 13,
-    "al2": 13,
+    "al": 14,
+    "al2": 14,
     "albatradis": 1,
     "albatradis-annotation": 1,
     "albatradis-artemis_project": 1,
@@ -5345,14 +5345,14 @@
     "annembed": 1,
     "annonars": 1,
     "annosine2": 1,
-    "annot-tsv": 7,
+    "annot-tsv": 9,
     "annot_blast_btop2.pl": 7,
     "annotate": 243,
     "annotate-partitions.py": 7,
     "annotate.py": 38,
     "annotate.pyc": 1,
     "annotateBAM.py": 1,
-    "annotateBed": 265,
+    "annotateBed": 266,
     "annotateBed_2way.pl": 1,
     "annotateInteractions.pl": 5,
     "annotatePeaks.pl": 5,
@@ -5727,7 +5727,7 @@
     "ase-gui": 3,
     "ase-info": 3,
     "ase-run": 3,
-    "aserver": 413,
+    "aserver": 417,
     "asession": 2,
     "asgal": 1,
     "asgal_BitVector.py": 1,
@@ -5772,6 +5772,7 @@
     "assemblyGet.py": 1,
     "assembly_annotation_tool.py": 1,
     "assembly_annotation_tool_seq.py": 1,
+    "assembly_block.py": 1,
     "assembly_finder": 1,
     "assembly_hub_constructor.pl": 1,
     "assemblyget": 23,
@@ -5852,7 +5853,7 @@
     "autometa-taxonomy-majority-vote": 2,
     "autometa-unclustered-recruitment": 2,
     "autometa-update-databases": 2,
-    "autopoint": 5228,
+    "autopoint": 5236,
     "autoreconf.bak": 10,
     "autoscan.bak": 10,
     "autoupdate.bak": 10,
@@ -5903,7 +5904,7 @@
     "axt_to_maf.py": 58,
     "b2": 2,
     "b2ct": 44,
-    "b2sum": 78,
+    "b2sum": 79,
     "b2w": 1,
     "bFst": 31,
     "bPTR": 1,
@@ -6035,9 +6036,9 @@
     "bamCoverage": 10,
     "bamFlags": 3,
     "bamPEFragmentSize": 10,
-    "bamToBed": 265,
+    "bamToBed": 266,
     "bamToBw.pl": 3,
-    "bamToFastq": 265,
+    "bamToFastq": 266,
     "bamToGBrowse.pl": 83,
     "bamToPsl": 1,
     "bamToWig.py": 11,
@@ -6192,10 +6193,10 @@
     "bart": 1,
     "bart-profile": 1,
     "bart-update": 1,
-    "base32": 79,
+    "base32": 80,
     "base3s": 1,
     "base58": 3,
-    "base64": 79,
+    "base64": 80,
     "baseCalling_Matrix_analyzer": 1,
     "baseCalling_Matrix_calculator": 1,
     "baseCalling_Matrix_merger": 1,
@@ -6203,8 +6204,8 @@
     "basecall_network.py": 1,
     "baseml": 63,
     "basemlg": 63,
-    "basename": 79,
-    "basenc": 76,
+    "basename": 80,
+    "basenc": 77,
     "basenji_annot_chr.py": 1,
     "basenji_bench_classify.py": 1,
     "basenji_bench_gtex.py": 1,
@@ -6352,7 +6353,7 @@
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     "bed12-to-gtf": 2,
-    "bed12ToBed6": 265,
+    "bed12ToBed6": 266,
     "bed2DtoUCSCbed.pl": 5,
     "bed2associated_genes.py": 1,
     "bed2bedGraph.pl": 1,
@@ -6371,10 +6372,10 @@
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     "bedGraphToBigWig": 18,
     "bedSort": 2,
-    "bedToBam": 265,
+    "bedToBam": 266,
     "bedToBigBed": 18,
     "bedToGenePred": 6,
-    "bedToIgv": 265,
+    "bedToIgv": 266,
     "bed_bigwig_profile.py": 58,
     "bed_build_windows.py": 58,
     "bed_complement.py": 58,
@@ -6398,6 +6399,7 @@
     "bedextract-typical": 14,
     "bedgovcf": 1,
     "bedgraph2wig.pl": 14,
+    "bedgraphtobigwig": 1,
     "bedmap": 14,
     "bedmap-float128": 14,
     "bedmap-megarow": 14,
@@ -6408,11 +6410,12 @@
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     "bedoverlap": 1,
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-    "bedpeToBam": 265,
+    "bedpeToBam": 266,
     "bedpeToBam.py": 1,
     "bedpeToBed12.py": 1,
     "bedtk": 2,
-    "bedtools": 265,
+    "bedtobigbed": 1,
+    "bedtools": 266,
     "bedutils": 1,
     "bedx-to-bedy": 2,
     "beeline": 6,
@@ -6452,7 +6455,7 @@
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+    "bgzip": 680,
     "bgzip.pl": 4,
     "bgziptabix": 31,
     "bialign.py": 1,
@@ -6477,9 +6480,17 @@
     "bigWigToBedGraph": 11,
     "bigWigToWig": 2,
     "bigWigToWig.pl": 3,
+    "bigbedinfo": 1,
+    "bigbedtobed": 1,
     "bigscape.py": 1,
     "bigsi": 1,
+    "bigtools": 1,
     "bigwigCompare": 10,
+    "bigwigaverageoverbed": 1,
+    "bigwiginfo": 1,
+    "bigwigmerge": 1,
+    "bigwigtobedgraph": 1,
+    "bigwigvaluesoverbed": 1,
     "bin-packing": 2,
     "bin-refine": 1,
     "binReads.pl": 1,
@@ -6626,7 +6637,7 @@
     "blast2lca": 1,
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     "blast2sam": 1,
-    "blast2sam.pl": 492,
+    "blast2sam.pl": 494,
     "blastMapAnalyzer2.pl": 1,
     "blastMining": 1,
     "blastMining_lca.sh": 1,
@@ -6747,7 +6758,7 @@
     "bowtie2-inspect-l": 107,
     "bowtie2-inspect-s": 107,
     "bowtie2_stuff.py": 1,
-    "bowtie2sam.pl": 492,
+    "bowtie2sam.pl": 494,
     "bowtie_PE_separate_then_join.pl": 1,
     "bowtie_mapper.sh": 1,
     "box": 1,
@@ -6911,7 +6922,7 @@
     "broad_utils.py": 1,
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-    "brotli": 379,
+    "brotli": 382,
     "browse": 16,
     "bs_call": 2,
     "bs_seeker2-align.py": 1,
@@ -6919,9 +6930,9 @@
     "bs_seeker2-call_methylation.py": 1,
     "bsalign": 1,
     "bsb4": 1,
-    "bsdcat": 31,
-    "bsdcpio": 31,
-    "bsdtar": 31,
+    "bsdcat": 32,
+    "bsdcpio": 32,
+    "bsdtar": 32,
     "bsdunzip": 3,
     "bseqc2": 4,
     "bseqc2mbiasplot.R": 4,
@@ -7007,7 +7018,7 @@
     "bundlelinks": 1,
     "bundler": 17,
     "bunwarpj": 4,
-    "bunzip2": 6465,
+    "bunzip2": 6477,
     "burden_test_vase": 1,
     "burst_linux_DB12": 1,
     "burst_linux_DB15": 1,
@@ -7058,16 +7069,16 @@
     "bxStats.py": 1,
     "bxcl_seqqc": 1,
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-    "bzcat": 6465,
-    "bzcmp": 6465,
-    "bzdiff": 6465,
-    "bzegrep": 6465,
-    "bzfgrep": 6465,
-    "bzgrep": 6465,
-    "bzip2": 6465,
-    "bzip2recover": 6465,
-    "bzless": 6465,
-    "bzmore": 6465,
+    "bzcat": 6477,
+    "bzcmp": 6477,
+    "bzdiff": 6477,
+    "bzegrep": 6477,
+    "bzfgrep": 6477,
+    "bzgrep": 6477,
+    "bzip2": 6477,
+    "bzip2recover": 6477,
+    "bzless": 6477,
+    "bzmore": 6477,
     "c++": 4,
     "c++filt": 7,
     "c-index-test": 8,
@@ -7084,7 +7095,7 @@
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     "cPecanModifyHmm": 1,
     "cPecanRealign": 1,
-    "c_rehash": 7615,
+    "c_rehash": 7627,
     "ca2ace.pl": 3,
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     "ca2mates": 2,
@@ -7157,7 +7168,7 @@
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-    "cairo-trace": 5077,
+    "cairo-trace": 5083,
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     "cal": 12,
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@@ -7254,7 +7265,7 @@
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     "capnpc-cython": 1,
-    "captoinfo": 7547,
+    "captoinfo": 7559,
     "captus_assembly": 1,
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@@ -7295,12 +7306,12 @@
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+    "caspol": 14,
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     "cat-corrects": 3,
     "cat-erates": 3,
@@ -7339,14 +7350,14 @@
     "cbSeurat": 1,
     "cbTool": 1,
     "cbUpgrade": 1,
-    "cbc": 94,
+    "cbc": 96,
     "cbi": 1,
     "cblaster": 1,
     "cbrunsli": 19,
     "cc": 4,
     "cc.bin": 1,
     "ccache-swig": 13,
-    "cccheck": 13,
+    "cccheck": 14,
     "ccconfig": 56,
     "ccextract": 11,
     "ccextract.2": 9,
@@ -7362,7 +7373,7 @@
     "cconfig": 1,
     "ccphylo": 1,
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-    "ccrewrite": 13,
+    "ccrewrite": 14,
     "ccs": 3,
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     "ccs-kinetics-bystrandify": 3,
@@ -7441,9 +7452,9 @@
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     "ceqlogo": 13,
-    "cert-sync": 13,
-    "cert2spc": 13,
-    "certmgr": 13,
+    "cert-sync": 14,
+    "cert2spc": 14,
+    "certmgr": 14,
     "certtool": 30,
     "certutil": 164,
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@@ -7504,12 +7515,12 @@
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     "charfreq": 1,
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     "check": 2,
     "check-assembly-accession.py": 2,
     "check-corrupt": 3,
@@ -7600,7 +7611,7 @@
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     "chexalign": 1,
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+    "chgrp": 80,
     "chi2": 63,
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@@ -7625,9 +7636,9 @@
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-    "chktrust": 13,
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     "choom": 12,
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@@ -7636,7 +7647,7 @@
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-    "chown": 79,
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     "chroder": 1,
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     "chrom_sizes.pl": 83,
@@ -7649,7 +7660,7 @@
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     "chronumental": 1,
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+    "chroot": 80,
     "chrpath": 16,
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@@ -7684,9 +7695,9 @@
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-    "cjpeg": 5683,
+    "cjpeg": 5691,
     "ckeygen": 1,
-    "cksum": 79,
+    "cksum": 80,
     "claMLST": 1,
     "cladebreaker": 1,
     "cladeomatic": 1,
@@ -7789,7 +7800,7 @@
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     "cleanup-stale-gcp-resources.py": 1,
     "cleanup.py": 1,
-    "clear": 7547,
+    "clear": 7559,
     "clearCNV": 1,
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@@ -7834,11 +7845,11 @@
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     "closest-features-typical": 14,
-    "closestBed": 265,
+    "closestBed": 266,
     "closest_residues": 1,
     "cloudgene.yaml": 1,
     "clove": 1,
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     "clsify": 1,
     "clstr2tree.pl": 43,
     "clstr2txt.pl": 43,
@@ -7878,7 +7889,7 @@
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     "cluster2bedgraph.pl": 5,
     "clusterAndSplitGenes.pl": 14,
-    "clusterBed": 265,
+    "clusterBed": 266,
     "clusterGenes": 1,
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@@ -7918,6 +7929,7 @@
     "cmfinder04": 1,
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+    "cmp": 1,
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     "cmpgenome": 1,
@@ -7942,7 +7954,7 @@
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     "cmstat": 55,
     "cmtime": 12,
-    "cnitool": 2,
+    "cnitool": 3,
     "cntcpg": 1,
     "cntcpg.c": 1,
     "cntcpg.o": 1,
@@ -8070,7 +8082,7 @@
     "comet": 2,
     "comet.exe": 2,
     "comgen": 1,
-    "comm": 79,
+    "comm": 80,
     "commandline.sh": 1,
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@@ -8136,10 +8148,10 @@
     "compileSpliceCands": 12,
     "compile_STARE_Linux.sh": 1,
     "compile_STARE_macOS.sh": 1,
-    "compile_et": 5706,
+    "compile_et": 5714,
     "compiled_table.py": 1,
     "compleasm": 1,
-    "complementBed": 265,
+    "complementBed": 266,
     "complete-ant-cmd.pl": 1,
     "complete_locus": 1,
     "completion.bash": 1,
@@ -8408,7 +8420,7 @@
     "cooc-pubmut": 1,
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     "cook_coding_for_blast.py": 1,
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+    "cookiecutter": 10,
     "coolbox": 1,
     "cooler": 19,
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@@ -8511,7 +8523,7 @@
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     "coverage3": 2,
-    "coverageBed": 265,
+    "coverageBed": 266,
     "coverage_estimator.py": 1,
     "coverage_from_bam": 1,
     "coverage_from_fastx": 1,
@@ -8528,7 +8540,7 @@
     "covid-spike-classification": 1,
     "covtobed": 1,
     "covtotarget": 1,
-    "cp": 79,
+    "cp": 80,
     "cp2k.sopt": 1,
     "cp2k.ssmp": 1,
     "cp2k_prep": 1,
@@ -8670,7 +8682,7 @@
     "crispritz.py": 2,
     "crisprme.py": 1,
     "crisprtools": 1,
-    "crlupdate": 13,
+    "crlupdate": 14,
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     "zff2genbank.pl": 1,
     "zff2gff3.pl": 2,
-    "zfgrep": 16,
-    "zforce": 16,
+    "zfgrep": 17,
+    "zforce": 17,
     "zfp": 19,
     "zga": 1,
-    "zgrep": 16,
+    "zgrep": 17,
     "zic": 42,
-    "zip": 14,
+    "zip": 15,
     "zipHomerResults.pl": 5,
+    "zipcloak": 1,
     "zipcmp": 90,
     "zipdetails": 1650,
     "zipgrep": 25,
     "zipinfo": 25,
     "zipmerge": 90,
+    "zipnote": 1,
+    "zipsplit": 1,
     "ziptool": 90,
     "zless": 5,
     "zlib.net.dll": 4,
     "zlib_decompress": 5,
-    "zmore": 16,
+    "zmore": 17,
     "zmwfilter": 3,
-    "znew": 16,
+    "znew": 17,
     "zol": 1,
     "zoom": 1,
-    "zoom2sam.pl": 492,
+    "zoom2sam.pl": 494,
     "zopfli": 19,
     "zopflipng": 19,
     "zorro": 1,
@@ -25468,10 +25519,10 @@
     "zrun": 3,
     "zsh": 3,
     "zsh-5.8": 3,
-    "zstd": 5079,
-    "zstdcat": 5079,
-    "zstdgrep": 4877,
-    "zstdless": 4877,
-    "zstdmt": 5079,
+    "zstd": 5089,
+    "zstdcat": 5089,
+    "zstdgrep": 4887,
+    "zstdless": 4887,
+    "zstdmt": 5089,
     "ztr_dump": 2
 }
\ No newline at end of file
diff --git a/quay.io/biocontainers/b/bigtools:0.4.1--h031d066_0.json b/quay.io/biocontainers/b/bigtools:0.4.1--h031d066_0.json
new file mode 100644
index 0000000..3e4b866
--- /dev/null
+++ b/quay.io/biocontainers/b/bigtools:0.4.1--h031d066_0.json
@@ -0,0 +1,13 @@
+{
+    "bedgraphtobigwig": "/usr/local/bin/bedgraphtobigwig",
+    "bedtobigbed": "/usr/local/bin/bedtobigbed",
+    "bigbedinfo": "/usr/local/bin/bigbedinfo",
+    "bigbedtobed": "/usr/local/bin/bigbedtobed",
+    "bigtools": "/usr/local/bin/bigtools",
+    "bigwigaverageoverbed": "/usr/local/bin/bigwigaverageoverbed",
+    "bigwiginfo": "/usr/local/bin/bigwiginfo",
+    "bigwigmerge": "/usr/local/bin/bigwigmerge",
+    "bigwigtobedgraph": "/usr/local/bin/bigwigtobedgraph",
+    "bigwigvaluesoverbed": "/usr/local/bin/bigwigvaluesoverbed",
+    "env-execute": "/usr/local/env-execute"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/g/gametes:2.1--py310h7cba7a3_0.json b/quay.io/biocontainers/g/gametes:2.1--py310h7cba7a3_0.json
new file mode 100644
index 0000000..3c78a69
--- /dev/null
+++ b/quay.io/biocontainers/g/gametes:2.1--py310h7cba7a3_0.json
@@ -0,0 +1,214 @@
+{
+    "2to3": "/usr/local/bin/2to3",
+    "2to3-3.12": "/usr/local/bin/2to3-3.12",
+    "aserver": "/usr/local/bin/aserver",
+    "autopoint": "/usr/local/bin/autopoint",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "cairo-trace": "/usr/local/bin/cairo-trace",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "cjpeg": "/usr/local/bin/cjpeg",
+    "clear": "/usr/local/bin/clear",
+    "compile_et": "/usr/local/bin/compile_et",
+    "cups-config": "/usr/local/bin/cups-config",
+    "derb": "/usr/local/bin/derb",
+    "djpeg": "/usr/local/bin/djpeg",
+    "envsubst": "/usr/local/bin/envsubst",
+    "fc-cache": "/usr/local/bin/fc-cache",
+    "fc-cat": "/usr/local/bin/fc-cat",
+    "fc-conflist": "/usr/local/bin/fc-conflist",
+    "fc-list": "/usr/local/bin/fc-list",
+    "fc-match": "/usr/local/bin/fc-match",
+    "fc-pattern": "/usr/local/bin/fc-pattern",
+    "fc-query": "/usr/local/bin/fc-query",
+    "fc-scan": "/usr/local/bin/fc-scan",
+    "fc-validate": "/usr/local/bin/fc-validate",
+    "freetype-config": "/usr/local/bin/freetype-config",
+    "gametes": "/usr/local/bin/gametes",
+    "genbrk": "/usr/local/bin/genbrk",
+    "gencfu": "/usr/local/bin/gencfu",
+    "gencnval": "/usr/local/bin/gencnval",
+    "gendict": "/usr/local/bin/gendict",
+    "genrb": "/usr/local/bin/genrb",
+    "gettext": "/usr/local/bin/gettext",
+    "gettext.sh": "/usr/local/bin/gettext.sh",
+    "gettextize": "/usr/local/bin/gettextize",
+    "gif2rgb": "/usr/local/bin/gif2rgb",
+    "gifbuild": "/usr/local/bin/gifbuild",
+    "gifclrmp": "/usr/local/bin/gifclrmp",
+    "giffix": "/usr/local/bin/giffix",
+    "giftext": "/usr/local/bin/giftext",
+    "giftool": "/usr/local/bin/giftool",
+    "gss-client": "/usr/local/bin/gss-client",
+    "hb-info": "/usr/local/bin/hb-info",
+    "hb-ot-shape-closure": "/usr/local/bin/hb-ot-shape-closure",
+    "hb-shape": "/usr/local/bin/hb-shape",
+    "hb-subset": "/usr/local/bin/hb-subset",
+    "hb-view": "/usr/local/bin/hb-view",
+    "icu-config": "/usr/local/bin/icu-config",
+    "icuexportdata": "/usr/local/bin/icuexportdata",
+    "icuinfo": "/usr/local/bin/icuinfo",
+    "idle3": "/usr/local/bin/idle3",
+    "idle3.12": "/usr/local/bin/idle3.12",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "ippeveprinter": "/usr/local/bin/ippeveprinter",
+    "ipptool": "/usr/local/bin/ipptool",
+    "jar": "/usr/local/bin/jar",
+    "jarsigner": "/usr/local/bin/jarsigner",
+    "java": "/usr/local/bin/java",
+    "javac": "/usr/local/bin/javac",
+    "javadoc": "/usr/local/bin/javadoc",
+    "javap": "/usr/local/bin/javap",
+    "jcmd": "/usr/local/bin/jcmd",
+    "jconsole": "/usr/local/bin/jconsole",
+    "jdb": "/usr/local/bin/jdb",
+    "jdeprscan": "/usr/local/bin/jdeprscan",
+    "jdeps": "/usr/local/bin/jdeps",
+    "jfr": "/usr/local/bin/jfr",
+    "jhsdb": "/usr/local/bin/jhsdb",
+    "jimage": "/usr/local/bin/jimage",
+    "jinfo": "/usr/local/bin/jinfo",
+    "jlink": "/usr/local/bin/jlink",
+    "jmap": "/usr/local/bin/jmap",
+    "jmod": "/usr/local/bin/jmod",
+    "jpackage": "/usr/local/bin/jpackage",
+    "jpegtran": "/usr/local/bin/jpegtran",
+    "jpgicc": "/usr/local/bin/jpgicc",
+    "jps": "/usr/local/bin/jps",
+    "jrunscript": "/usr/local/bin/jrunscript",
+    "jshell": "/usr/local/bin/jshell",
+    "jstack": "/usr/local/bin/jstack",
+    "jstat": "/usr/local/bin/jstat",
+    "jstatd": "/usr/local/bin/jstatd",
+    "jwebserver": "/usr/local/bin/jwebserver",
+    "k5srvutil": "/usr/local/bin/k5srvutil",
+    "kadmin": "/usr/local/bin/kadmin",
+    "kdestroy": "/usr/local/bin/kdestroy",
+    "keyctl": "/usr/local/bin/keyctl",
+    "keytool": "/usr/local/bin/keytool",
+    "kinit": "/usr/local/bin/kinit",
+    "klist": "/usr/local/bin/klist",
+    "kpasswd": "/usr/local/bin/kpasswd",
+    "krb5-config": "/usr/local/bin/krb5-config",
+    "ksu": "/usr/local/bin/ksu",
+    "kswitch": "/usr/local/bin/kswitch",
+    "ktutil": "/usr/local/bin/ktutil",
+    "kvno": "/usr/local/bin/kvno",
+    "libdeflate-gunzip": "/usr/local/bin/libdeflate-gunzip",
+    "libdeflate-gzip": "/usr/local/bin/libdeflate-gzip",
+    "libpng-config": "/usr/local/bin/libpng-config",
+    "libpng16-config": "/usr/local/bin/libpng16-config",
+    "linkicc": "/usr/local/bin/linkicc",
+    "lzcat": "/usr/local/bin/lzcat",
+    "lzcmp": "/usr/local/bin/lzcmp",
+    "lzdiff": "/usr/local/bin/lzdiff",
+    "lzegrep": "/usr/local/bin/lzegrep",
+    "lzfgrep": "/usr/local/bin/lzfgrep",
+    "lzgrep": "/usr/local/bin/lzgrep",
+    "lzless": "/usr/local/bin/lzless",
+    "lzma": "/usr/local/bin/lzma",
+    "lzmadec": "/usr/local/bin/lzmadec",
+    "lzmainfo": "/usr/local/bin/lzmainfo",
+    "lzmore": "/usr/local/bin/lzmore",
+    "makeconv": "/usr/local/bin/makeconv",
+    "msgattrib": "/usr/local/bin/msgattrib",
+    "msgcat": "/usr/local/bin/msgcat",
+    "msgcmp": "/usr/local/bin/msgcmp",
+    "msgcomm": "/usr/local/bin/msgcomm",
+    "msgconv": "/usr/local/bin/msgconv",
+    "msgen": "/usr/local/bin/msgen",
+    "msgexec": "/usr/local/bin/msgexec",
+    "msgfilter": "/usr/local/bin/msgfilter",
+    "msgfmt": "/usr/local/bin/msgfmt",
+    "msggrep": "/usr/local/bin/msggrep",
+    "msginit": "/usr/local/bin/msginit",
+    "msgmerge": "/usr/local/bin/msgmerge",
+    "msgunfmt": "/usr/local/bin/msgunfmt",
+    "msguniq": "/usr/local/bin/msguniq",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "ngettext": "/usr/local/bin/ngettext",
+    "openssl": "/usr/local/bin/openssl",
+    "pcre2-config": "/usr/local/bin/pcre2-config",
+    "pcre2_jit_test": "/usr/local/bin/pcre2_jit_test",
+    "pcre2grep": "/usr/local/bin/pcre2grep",
+    "pcre2posix_test": "/usr/local/bin/pcre2posix_test",
+    "pcre2test": "/usr/local/bin/pcre2test",
+    "pip": "/usr/local/bin/pip",
+    "pip3": "/usr/local/bin/pip3",
+    "pkgdata": "/usr/local/bin/pkgdata",
+    "png-fix-itxt": "/usr/local/bin/png-fix-itxt",
+    "pngfix": "/usr/local/bin/pngfix",
+    "psicc": "/usr/local/bin/psicc",
+    "pydoc": "/usr/local/bin/pydoc",
+    "pydoc3": "/usr/local/bin/pydoc3",
+    "pydoc3.12": "/usr/local/bin/pydoc3.12",
+    "python": "/usr/local/bin/python",
+    "python3": "/usr/local/bin/python3",
+    "python3-config": "/usr/local/bin/python3-config",
+    "python3.1": "/usr/local/bin/python3.1",
+    "python3.12": "/usr/local/bin/python3.12",
+    "python3.12-config": "/usr/local/bin/python3.12-config",
+    "rdjpgcom": "/usr/local/bin/rdjpgcom",
+    "recode-sr-latin": "/usr/local/bin/recode-sr-latin",
+    "reset": "/usr/local/bin/reset",
+    "rmiregistry": "/usr/local/bin/rmiregistry",
+    "sclient": "/usr/local/bin/sclient",
+    "serialver": "/usr/local/bin/serialver",
+    "sim_client": "/usr/local/bin/sim_client",
+    "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
+    "tabs": "/usr/local/bin/tabs",
+    "tclsh": "/usr/local/bin/tclsh",
+    "tclsh8.6": "/usr/local/bin/tclsh8.6",
+    "tic": "/usr/local/bin/tic",
+    "tiffcp": "/usr/local/bin/tiffcp",
+    "tiffdump": "/usr/local/bin/tiffdump",
+    "tiffinfo": "/usr/local/bin/tiffinfo",
+    "tiffset": "/usr/local/bin/tiffset",
+    "tiffsplit": "/usr/local/bin/tiffsplit",
+    "tificc": "/usr/local/bin/tificc",
+    "tjbench": "/usr/local/bin/tjbench",
+    "toe": "/usr/local/bin/toe",
+    "tput": "/usr/local/bin/tput",
+    "transicc": "/usr/local/bin/transicc",
+    "tset": "/usr/local/bin/tset",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unxz": "/usr/local/bin/unxz",
+    "unzstd": "/usr/local/bin/unzstd",
+    "uuclient": "/usr/local/bin/uuclient",
+    "wheel": "/usr/local/bin/wheel",
+    "wish": "/usr/local/bin/wish",
+    "wish8.6": "/usr/local/bin/wish8.6",
+    "wrjpgcom": "/usr/local/bin/wrjpgcom",
+    "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
+    "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
+    "xgettext": "/usr/local/bin/xgettext",
+    "xmlwf": "/usr/local/bin/xmlwf",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore",
+    "zstd": "/usr/local/bin/zstd",
+    "zstdcat": "/usr/local/bin/zstdcat",
+    "zstdgrep": "/usr/local/bin/zstdgrep",
+    "zstdless": "/usr/local/bin/zstdless",
+    "zstdmt": "/usr/local/bin/zstdmt",
+    "env-execute": "/usr/local/env-execute"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/g/gffpandas:1.2.2--pyhdfd78af_0.json b/quay.io/biocontainers/g/gffpandas:1.2.2--pyhdfd78af_0.json
new file mode 100644
index 0000000..7ac683a
--- /dev/null
+++ b/quay.io/biocontainers/g/gffpandas:1.2.2--pyhdfd78af_0.json
@@ -0,0 +1,75 @@
+{
+    "2to3": "/usr/local/bin/2to3",
+    "2to3-3.12": "/usr/local/bin/2to3-3.12",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "clear": "/usr/local/bin/clear",
+    "f2py": "/usr/local/bin/f2py",
+    "idle3": "/usr/local/bin/idle3",
+    "idle3.12": "/usr/local/bin/idle3.12",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "lzcat": "/usr/local/bin/lzcat",
+    "lzcmp": "/usr/local/bin/lzcmp",
+    "lzdiff": "/usr/local/bin/lzdiff",
+    "lzegrep": "/usr/local/bin/lzegrep",
+    "lzfgrep": "/usr/local/bin/lzfgrep",
+    "lzgrep": "/usr/local/bin/lzgrep",
+    "lzless": "/usr/local/bin/lzless",
+    "lzma": "/usr/local/bin/lzma",
+    "lzmadec": "/usr/local/bin/lzmadec",
+    "lzmainfo": "/usr/local/bin/lzmainfo",
+    "lzmore": "/usr/local/bin/lzmore",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "openssl": "/usr/local/bin/openssl",
+    "pip": "/usr/local/bin/pip",
+    "pip3": "/usr/local/bin/pip3",
+    "pydoc": "/usr/local/bin/pydoc",
+    "pydoc3": "/usr/local/bin/pydoc3",
+    "pydoc3.12": "/usr/local/bin/pydoc3.12",
+    "python": "/usr/local/bin/python",
+    "python3": "/usr/local/bin/python3",
+    "python3-config": "/usr/local/bin/python3-config",
+    "python3.1": "/usr/local/bin/python3.1",
+    "python3.12": "/usr/local/bin/python3.12",
+    "python3.12-config": "/usr/local/bin/python3.12-config",
+    "reset": "/usr/local/bin/reset",
+    "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
+    "tabs": "/usr/local/bin/tabs",
+    "tclsh": "/usr/local/bin/tclsh",
+    "tclsh8.6": "/usr/local/bin/tclsh8.6",
+    "tic": "/usr/local/bin/tic",
+    "toe": "/usr/local/bin/toe",
+    "tput": "/usr/local/bin/tput",
+    "tset": "/usr/local/bin/tset",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unxz": "/usr/local/bin/unxz",
+    "wheel": "/usr/local/bin/wheel",
+    "wish": "/usr/local/bin/wish",
+    "wish8.6": "/usr/local/bin/wish8.6",
+    "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
+    "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore",
+    "env-execute": "/usr/local/env-execute"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/g/graphembed:0.1.0--hdbdd923_0.json b/quay.io/biocontainers/g/graphembed:0.1.0--hdbdd923_0.json
new file mode 100644
index 0000000..0ba471c
--- /dev/null
+++ b/quay.io/biocontainers/g/graphembed:0.1.0--hdbdd923_0.json
@@ -0,0 +1,4 @@
+{
+    "graphembed": "/usr/local/bin/graphembed",
+    "env-execute": "/usr/local/env-execute"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/g/gxf2bed:0.1.0--h4ac6f70_0.json b/quay.io/biocontainers/g/gxf2bed:0.1.0--h4ac6f70_0.json
new file mode 100644
index 0000000..0d0625a
--- /dev/null
+++ b/quay.io/biocontainers/g/gxf2bed:0.1.0--h4ac6f70_0.json
@@ -0,0 +1,4 @@
+{
+    "gxf2bed": "/usr/local/bin/gxf2bed",
+    "env-execute": "/usr/local/env-execute"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/h/hmftools-cuppa:1.8.1--hdfd78af_0.json b/quay.io/biocontainers/h/hmftools-cuppa:1.8.1--hdfd78af_0.json
new file mode 100644
index 0000000..b8edfc8
--- /dev/null
+++ b/quay.io/biocontainers/h/hmftools-cuppa:1.8.1--hdfd78af_0.json
@@ -0,0 +1,303 @@
+{
+    "2to3": "/usr/local/bin/2to3",
+    "2to3-3.11": "/usr/local/bin/2to3-3.11",
+    "R": "/usr/local/bin/R",
+    "Rscript": "/usr/local/bin/Rscript",
+    "adig": "/usr/local/bin/adig",
+    "ahost": "/usr/local/bin/ahost",
+    "aserver": "/usr/local/bin/aserver",
+    "autopoint": "/usr/local/bin/autopoint",
+    "brotli": "/usr/local/bin/brotli",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "cairo-trace": "/usr/local/bin/cairo-trace",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "cjpeg": "/usr/local/bin/cjpeg",
+    "clear": "/usr/local/bin/clear",
+    "compile_et": "/usr/local/bin/compile_et",
+    "cuppa": "/usr/local/bin/cuppa",
+    "cuppa-chart": "/usr/local/bin/cuppa-chart",
+    "cups-config": "/usr/local/bin/cups-config",
+    "curl": "/usr/local/bin/curl",
+    "curl-config": "/usr/local/bin/curl-config",
+    "derb": "/usr/local/bin/derb",
+    "djpeg": "/usr/local/bin/djpeg",
+    "envsubst": "/usr/local/bin/envsubst",
+    "f2py": "/usr/local/bin/f2py",
+    "fc-cache": "/usr/local/bin/fc-cache",
+    "fc-cat": "/usr/local/bin/fc-cat",
+    "fc-conflist": "/usr/local/bin/fc-conflist",
+    "fc-list": "/usr/local/bin/fc-list",
+    "fc-match": "/usr/local/bin/fc-match",
+    "fc-pattern": "/usr/local/bin/fc-pattern",
+    "fc-query": "/usr/local/bin/fc-query",
+    "fc-scan": "/usr/local/bin/fc-scan",
+    "fc-validate": "/usr/local/bin/fc-validate",
+    "fonttools": "/usr/local/bin/fonttools",
+    "freetype-config": "/usr/local/bin/freetype-config",
+    "fribidi": "/usr/local/bin/fribidi",
+    "genbrk": "/usr/local/bin/genbrk",
+    "gencfu": "/usr/local/bin/gencfu",
+    "gencnval": "/usr/local/bin/gencnval",
+    "gendict": "/usr/local/bin/gendict",
+    "genrb": "/usr/local/bin/genrb",
+    "gettext": "/usr/local/bin/gettext",
+    "gettext.sh": "/usr/local/bin/gettext.sh",
+    "gettextize": "/usr/local/bin/gettextize",
+    "gif2rgb": "/usr/local/bin/gif2rgb",
+    "gifbuild": "/usr/local/bin/gifbuild",
+    "gifclrmp": "/usr/local/bin/gifclrmp",
+    "giffix": "/usr/local/bin/giffix",
+    "giftext": "/usr/local/bin/giftext",
+    "giftool": "/usr/local/bin/giftool",
+    "gss-client": "/usr/local/bin/gss-client",
+    "hb-info": "/usr/local/bin/hb-info",
+    "hb-ot-shape-closure": "/usr/local/bin/hb-ot-shape-closure",
+    "hb-shape": "/usr/local/bin/hb-shape",
+    "hb-subset": "/usr/local/bin/hb-subset",
+    "hb-view": "/usr/local/bin/hb-view",
+    "icu-config": "/usr/local/bin/icu-config",
+    "icuexportdata": "/usr/local/bin/icuexportdata",
+    "icuinfo": "/usr/local/bin/icuinfo",
+    "idle3": "/usr/local/bin/idle3",
+    "idle3.11": "/usr/local/bin/idle3.11",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "ippeveprinter": "/usr/local/bin/ippeveprinter",
+    "ipptool": "/usr/local/bin/ipptool",
+    "jar": "/usr/local/bin/jar",
+    "jarsigner": "/usr/local/bin/jarsigner",
+    "java": "/usr/local/bin/java",
+    "javac": "/usr/local/bin/javac",
+    "javadoc": "/usr/local/bin/javadoc",
+    "javap": "/usr/local/bin/javap",
+    "jcmd": "/usr/local/bin/jcmd",
+    "jconsole": "/usr/local/bin/jconsole",
+    "jdb": "/usr/local/bin/jdb",
+    "jdeprscan": "/usr/local/bin/jdeprscan",
+    "jdeps": "/usr/local/bin/jdeps",
+    "jfr": "/usr/local/bin/jfr",
+    "jhsdb": "/usr/local/bin/jhsdb",
+    "jimage": "/usr/local/bin/jimage",
+    "jinfo": "/usr/local/bin/jinfo",
+    "jlink": "/usr/local/bin/jlink",
+    "jmap": "/usr/local/bin/jmap",
+    "jmod": "/usr/local/bin/jmod",
+    "jpackage": "/usr/local/bin/jpackage",
+    "jpegtran": "/usr/local/bin/jpegtran",
+    "jpgicc": "/usr/local/bin/jpgicc",
+    "jps": "/usr/local/bin/jps",
+    "jrunscript": "/usr/local/bin/jrunscript",
+    "jshell": "/usr/local/bin/jshell",
+    "jstack": "/usr/local/bin/jstack",
+    "jstat": "/usr/local/bin/jstat",
+    "jstatd": "/usr/local/bin/jstatd",
+    "jwebserver": "/usr/local/bin/jwebserver",
+    "k5srvutil": "/usr/local/bin/k5srvutil",
+    "kadmin": "/usr/local/bin/kadmin",
+    "kdestroy": "/usr/local/bin/kdestroy",
+    "keyctl": "/usr/local/bin/keyctl",
+    "keytool": "/usr/local/bin/keytool",
+    "kinit": "/usr/local/bin/kinit",
+    "klist": "/usr/local/bin/klist",
+    "kpasswd": "/usr/local/bin/kpasswd",
+    "krb5-config": "/usr/local/bin/krb5-config",
+    "ksu": "/usr/local/bin/ksu",
+    "kswitch": "/usr/local/bin/kswitch",
+    "ktutil": "/usr/local/bin/ktutil",
+    "kvno": "/usr/local/bin/kvno",
+    "libdeflate-gunzip": "/usr/local/bin/libdeflate-gunzip",
+    "libdeflate-gzip": "/usr/local/bin/libdeflate-gzip",
+    "libpng-config": "/usr/local/bin/libpng-config",
+    "libpng16-config": "/usr/local/bin/libpng16-config",
+    "linkicc": "/usr/local/bin/linkicc",
+    "lzcat": "/usr/local/bin/lzcat",
+    "lzcmp": "/usr/local/bin/lzcmp",
+    "lzdiff": "/usr/local/bin/lzdiff",
+    "lzegrep": "/usr/local/bin/lzegrep",
+    "lzfgrep": "/usr/local/bin/lzfgrep",
+    "lzgrep": "/usr/local/bin/lzgrep",
+    "lzless": "/usr/local/bin/lzless",
+    "lzma": "/usr/local/bin/lzma",
+    "lzmadec": "/usr/local/bin/lzmadec",
+    "lzmainfo": "/usr/local/bin/lzmainfo",
+    "lzmore": "/usr/local/bin/lzmore",
+    "make": "/usr/local/bin/make",
+    "makeconv": "/usr/local/bin/makeconv",
+    "msgattrib": "/usr/local/bin/msgattrib",
+    "msgcat": "/usr/local/bin/msgcat",
+    "msgcmp": "/usr/local/bin/msgcmp",
+    "msgcomm": "/usr/local/bin/msgcomm",
+    "msgconv": "/usr/local/bin/msgconv",
+    "msgen": "/usr/local/bin/msgen",
+    "msgexec": "/usr/local/bin/msgexec",
+    "msgfilter": "/usr/local/bin/msgfilter",
+    "msgfmt": "/usr/local/bin/msgfmt",
+    "msggrep": "/usr/local/bin/msggrep",
+    "msginit": "/usr/local/bin/msginit",
+    "msgmerge": "/usr/local/bin/msgmerge",
+    "msgunfmt": "/usr/local/bin/msgunfmt",
+    "msguniq": "/usr/local/bin/msguniq",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "ngettext": "/usr/local/bin/ngettext",
+    "nghttp": "/usr/local/bin/nghttp",
+    "nghttpd": "/usr/local/bin/nghttpd",
+    "nghttpx": "/usr/local/bin/nghttpx",
+    "openssl": "/usr/local/bin/openssl",
+    "opj_compress": "/usr/local/bin/opj_compress",
+    "opj_decompress": "/usr/local/bin/opj_decompress",
+    "opj_dump": "/usr/local/bin/opj_dump",
+    "pango-list": "/usr/local/bin/pango-list",
+    "pango-segmentation": "/usr/local/bin/pango-segmentation",
+    "pango-view": "/usr/local/bin/pango-view",
+    "pcre2-config": "/usr/local/bin/pcre2-config",
+    "pcre2_jit_test": "/usr/local/bin/pcre2_jit_test",
+    "pcre2grep": "/usr/local/bin/pcre2grep",
+    "pcre2posix_test": "/usr/local/bin/pcre2posix_test",
+    "pcre2test": "/usr/local/bin/pcre2test",
+    "pip": "/usr/local/bin/pip",
+    "pip3": "/usr/local/bin/pip3",
+    "pkgdata": "/usr/local/bin/pkgdata",
+    "png-fix-itxt": "/usr/local/bin/png-fix-itxt",
+    "pngfix": "/usr/local/bin/pngfix",
+    "psicc": "/usr/local/bin/psicc",
+    "pydoc": "/usr/local/bin/pydoc",
+    "pydoc3": "/usr/local/bin/pydoc3",
+    "pydoc3.11": "/usr/local/bin/pydoc3.11",
+    "pyftmerge": "/usr/local/bin/pyftmerge",
+    "pyftsubset": "/usr/local/bin/pyftsubset",
+    "python": "/usr/local/bin/python",
+    "python3": "/usr/local/bin/python3",
+    "python3-config": "/usr/local/bin/python3-config",
+    "python3.1": "/usr/local/bin/python3.1",
+    "python3.11": "/usr/local/bin/python3.11",
+    "python3.11-config": "/usr/local/bin/python3.11-config",
+    "rdjpgcom": "/usr/local/bin/rdjpgcom",
+    "recode-sr-latin": "/usr/local/bin/recode-sr-latin",
+    "reset": "/usr/local/bin/reset",
+    "rmiregistry": "/usr/local/bin/rmiregistry",
+    "sclient": "/usr/local/bin/sclient",
+    "sed": "/usr/local/bin/sed",
+    "serialver": "/usr/local/bin/serialver",
+    "sim_client": "/usr/local/bin/sim_client",
+    "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
+    "tabs": "/usr/local/bin/tabs",
+    "tclsh": "/usr/local/bin/tclsh",
+    "tclsh8.6": "/usr/local/bin/tclsh8.6",
+    "tic": "/usr/local/bin/tic",
+    "tiffcp": "/usr/local/bin/tiffcp",
+    "tiffdump": "/usr/local/bin/tiffdump",
+    "tiffinfo": "/usr/local/bin/tiffinfo",
+    "tiffset": "/usr/local/bin/tiffset",
+    "tiffsplit": "/usr/local/bin/tiffsplit",
+    "tificc": "/usr/local/bin/tificc",
+    "tjbench": "/usr/local/bin/tjbench",
+    "toe": "/usr/local/bin/toe",
+    "tput": "/usr/local/bin/tput",
+    "transicc": "/usr/local/bin/transicc",
+    "tset": "/usr/local/bin/tset",
+    "ttx": "/usr/local/bin/ttx",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unxz": "/usr/local/bin/unxz",
+    "unzstd": "/usr/local/bin/unzstd",
+    "uuclient": "/usr/local/bin/uuclient",
+    "wheel": "/usr/local/bin/wheel",
+    "wish": "/usr/local/bin/wish",
+    "wish8.6": "/usr/local/bin/wish8.6",
+    "wrjpgcom": "/usr/local/bin/wrjpgcom",
+    "x86_64-conda-linux-gnu-addr2line": "/usr/local/bin/x86_64-conda-linux-gnu-addr2line",
+    "x86_64-conda-linux-gnu-ar": "/usr/local/bin/x86_64-conda-linux-gnu-ar",
+    "x86_64-conda-linux-gnu-as": "/usr/local/bin/x86_64-conda-linux-gnu-as",
+    "x86_64-conda-linux-gnu-c++": "/usr/local/bin/x86_64-conda-linux-gnu-c++",
+    "x86_64-conda-linux-gnu-c++filt": "/usr/local/bin/x86_64-conda-linux-gnu-c++filt",
+    "x86_64-conda-linux-gnu-c89": "/usr/local/bin/x86_64-conda-linux-gnu-c89",
+    "x86_64-conda-linux-gnu-c99": "/usr/local/bin/x86_64-conda-linux-gnu-c99",
+    "x86_64-conda-linux-gnu-cc": "/usr/local/bin/x86_64-conda-linux-gnu-cc",
+    "x86_64-conda-linux-gnu-cpp": "/usr/local/bin/x86_64-conda-linux-gnu-cpp",
+    "x86_64-conda-linux-gnu-dwp": "/usr/local/bin/x86_64-conda-linux-gnu-dwp",
+    "x86_64-conda-linux-gnu-elfedit": "/usr/local/bin/x86_64-conda-linux-gnu-elfedit",
+    "x86_64-conda-linux-gnu-f95": "/usr/local/bin/x86_64-conda-linux-gnu-f95",
+    "x86_64-conda-linux-gnu-g++": "/usr/local/bin/x86_64-conda-linux-gnu-g++",
+    "x86_64-conda-linux-gnu-gcc": "/usr/local/bin/x86_64-conda-linux-gnu-gcc",
+    "x86_64-conda-linux-gnu-gcc-ar": "/usr/local/bin/x86_64-conda-linux-gnu-gcc-ar",
+    "x86_64-conda-linux-gnu-gcc-nm": "/usr/local/bin/x86_64-conda-linux-gnu-gcc-nm",
+    "x86_64-conda-linux-gnu-gcc-ranlib": "/usr/local/bin/x86_64-conda-linux-gnu-gcc-ranlib",
+    "x86_64-conda-linux-gnu-gcov": "/usr/local/bin/x86_64-conda-linux-gnu-gcov",
+    "x86_64-conda-linux-gnu-gcov-dump": "/usr/local/bin/x86_64-conda-linux-gnu-gcov-dump",
+    "x86_64-conda-linux-gnu-gcov-tool": "/usr/local/bin/x86_64-conda-linux-gnu-gcov-tool",
+    "x86_64-conda-linux-gnu-gfortran": "/usr/local/bin/x86_64-conda-linux-gnu-gfortran",
+    "x86_64-conda-linux-gnu-gprof": "/usr/local/bin/x86_64-conda-linux-gnu-gprof",
+    "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
+    "x86_64-conda-linux-gnu-ld.bfd": "/usr/local/bin/x86_64-conda-linux-gnu-ld.bfd",
+    "x86_64-conda-linux-gnu-ld.gold": "/usr/local/bin/x86_64-conda-linux-gnu-ld.gold",
+    "x86_64-conda-linux-gnu-nm": "/usr/local/bin/x86_64-conda-linux-gnu-nm",
+    "x86_64-conda-linux-gnu-objcopy": "/usr/local/bin/x86_64-conda-linux-gnu-objcopy",
+    "x86_64-conda-linux-gnu-objdump": "/usr/local/bin/x86_64-conda-linux-gnu-objdump",
+    "x86_64-conda-linux-gnu-ranlib": "/usr/local/bin/x86_64-conda-linux-gnu-ranlib",
+    "x86_64-conda-linux-gnu-readelf": "/usr/local/bin/x86_64-conda-linux-gnu-readelf",
+    "x86_64-conda-linux-gnu-size": "/usr/local/bin/x86_64-conda-linux-gnu-size",
+    "x86_64-conda-linux-gnu-strings": "/usr/local/bin/x86_64-conda-linux-gnu-strings",
+    "x86_64-conda-linux-gnu-strip": "/usr/local/bin/x86_64-conda-linux-gnu-strip",
+    "x86_64-conda_cos6-linux-gnu-addr2line": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-addr2line",
+    "x86_64-conda_cos6-linux-gnu-ar": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ar",
+    "x86_64-conda_cos6-linux-gnu-as": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-as",
+    "x86_64-conda_cos6-linux-gnu-c++": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c++",
+    "x86_64-conda_cos6-linux-gnu-c++filt": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c++filt",
+    "x86_64-conda_cos6-linux-gnu-c89": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c89",
+    "x86_64-conda_cos6-linux-gnu-c99": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c99",
+    "x86_64-conda_cos6-linux-gnu-cc": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-cc",
+    "x86_64-conda_cos6-linux-gnu-cpp": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-cpp",
+    "x86_64-conda_cos6-linux-gnu-dwp": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-dwp",
+    "x86_64-conda_cos6-linux-gnu-elfedit": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-elfedit",
+    "x86_64-conda_cos6-linux-gnu-f95": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-f95",
+    "x86_64-conda_cos6-linux-gnu-g++": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-g++",
+    "x86_64-conda_cos6-linux-gnu-gcc": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc",
+    "x86_64-conda_cos6-linux-gnu-gcc-ar": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc-ar",
+    "x86_64-conda_cos6-linux-gnu-gcc-nm": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc-nm",
+    "x86_64-conda_cos6-linux-gnu-gcc-ranlib": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc-ranlib",
+    "x86_64-conda_cos6-linux-gnu-gcov": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcov",
+    "x86_64-conda_cos6-linux-gnu-gcov-dump": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcov-dump",
+    "x86_64-conda_cos6-linux-gnu-gcov-tool": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcov-tool",
+    "x86_64-conda_cos6-linux-gnu-gfortran": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gfortran",
+    "x86_64-conda_cos6-linux-gnu-gprof": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gprof",
+    "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
+    "x86_64-conda_cos6-linux-gnu-ld.bfd": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld.bfd",
+    "x86_64-conda_cos6-linux-gnu-ld.gold": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld.gold",
+    "x86_64-conda_cos6-linux-gnu-nm": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-nm",
+    "x86_64-conda_cos6-linux-gnu-objcopy": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-objcopy",
+    "x86_64-conda_cos6-linux-gnu-objdump": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-objdump",
+    "x86_64-conda_cos6-linux-gnu-ranlib": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ranlib",
+    "x86_64-conda_cos6-linux-gnu-readelf": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-readelf",
+    "x86_64-conda_cos6-linux-gnu-size": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-size",
+    "x86_64-conda_cos6-linux-gnu-strings": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-strings",
+    "x86_64-conda_cos6-linux-gnu-strip": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-strip",
+    "xgettext": "/usr/local/bin/xgettext",
+    "xmlwf": "/usr/local/bin/xmlwf",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore",
+    "zstd": "/usr/local/bin/zstd",
+    "zstdcat": "/usr/local/bin/zstdcat",
+    "zstdgrep": "/usr/local/bin/zstdgrep",
+    "zstdless": "/usr/local/bin/zstdless",
+    "zstdmt": "/usr/local/bin/zstdmt",
+    "env-execute": "/usr/local/env-execute"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/h/hmftools-mark-dups:1.1--hdfd78af_0.json b/quay.io/biocontainers/h/hmftools-mark-dups:1.1--hdfd78af_0.json
new file mode 100644
index 0000000..d4f8ab6
--- /dev/null
+++ b/quay.io/biocontainers/h/hmftools-mark-dups:1.1--hdfd78af_0.json
@@ -0,0 +1,233 @@
+{
+    "ace2sam": "/usr/local/bin/ace2sam",
+    "adig": "/usr/local/bin/adig",
+    "ahost": "/usr/local/bin/ahost",
+    "annot-tsv": "/usr/local/bin/annot-tsv",
+    "aserver": "/usr/local/bin/aserver",
+    "autopoint": "/usr/local/bin/autopoint",
+    "bgzip": "/usr/local/bin/bgzip",
+    "blast2sam.pl": "/usr/local/bin/blast2sam.pl",
+    "bowtie2sam.pl": "/usr/local/bin/bowtie2sam.pl",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "cairo-trace": "/usr/local/bin/cairo-trace",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "cjpeg": "/usr/local/bin/cjpeg",
+    "clear": "/usr/local/bin/clear",
+    "compile_et": "/usr/local/bin/compile_et",
+    "cups-config": "/usr/local/bin/cups-config",
+    "curl-config": "/usr/local/bin/curl-config",
+    "derb": "/usr/local/bin/derb",
+    "djpeg": "/usr/local/bin/djpeg",
+    "envsubst": "/usr/local/bin/envsubst",
+    "export2sam.pl": "/usr/local/bin/export2sam.pl",
+    "fasta-sanitize.pl": "/usr/local/bin/fasta-sanitize.pl",
+    "fc-cache": "/usr/local/bin/fc-cache",
+    "fc-cat": "/usr/local/bin/fc-cat",
+    "fc-conflist": "/usr/local/bin/fc-conflist",
+    "fc-list": "/usr/local/bin/fc-list",
+    "fc-match": "/usr/local/bin/fc-match",
+    "fc-pattern": "/usr/local/bin/fc-pattern",
+    "fc-query": "/usr/local/bin/fc-query",
+    "fc-scan": "/usr/local/bin/fc-scan",
+    "fc-validate": "/usr/local/bin/fc-validate",
+    "freetype-config": "/usr/local/bin/freetype-config",
+    "genbrk": "/usr/local/bin/genbrk",
+    "gencfu": "/usr/local/bin/gencfu",
+    "gencnval": "/usr/local/bin/gencnval",
+    "gendict": "/usr/local/bin/gendict",
+    "genrb": "/usr/local/bin/genrb",
+    "gettext": "/usr/local/bin/gettext",
+    "gettext.sh": "/usr/local/bin/gettext.sh",
+    "gettextize": "/usr/local/bin/gettextize",
+    "gif2rgb": "/usr/local/bin/gif2rgb",
+    "gifbuild": "/usr/local/bin/gifbuild",
+    "gifclrmp": "/usr/local/bin/gifclrmp",
+    "giffix": "/usr/local/bin/giffix",
+    "giftext": "/usr/local/bin/giftext",
+    "giftool": "/usr/local/bin/giftool",
+    "gss-client": "/usr/local/bin/gss-client",
+    "hb-info": "/usr/local/bin/hb-info",
+    "hb-ot-shape-closure": "/usr/local/bin/hb-ot-shape-closure",
+    "hb-shape": "/usr/local/bin/hb-shape",
+    "hb-subset": "/usr/local/bin/hb-subset",
+    "hb-view": "/usr/local/bin/hb-view",
+    "htsfile": "/usr/local/bin/htsfile",
+    "icu-config": "/usr/local/bin/icu-config",
+    "icuexportdata": "/usr/local/bin/icuexportdata",
+    "icuinfo": "/usr/local/bin/icuinfo",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "interpolate_sam.pl": "/usr/local/bin/interpolate_sam.pl",
+    "ippeveprinter": "/usr/local/bin/ippeveprinter",
+    "ipptool": "/usr/local/bin/ipptool",
+    "jar": "/usr/local/bin/jar",
+    "jarsigner": "/usr/local/bin/jarsigner",
+    "java": "/usr/local/bin/java",
+    "javac": "/usr/local/bin/javac",
+    "javadoc": "/usr/local/bin/javadoc",
+    "javap": "/usr/local/bin/javap",
+    "jcmd": "/usr/local/bin/jcmd",
+    "jconsole": "/usr/local/bin/jconsole",
+    "jdb": "/usr/local/bin/jdb",
+    "jdeprscan": "/usr/local/bin/jdeprscan",
+    "jdeps": "/usr/local/bin/jdeps",
+    "jfr": "/usr/local/bin/jfr",
+    "jhsdb": "/usr/local/bin/jhsdb",
+    "jimage": "/usr/local/bin/jimage",
+    "jinfo": "/usr/local/bin/jinfo",
+    "jlink": "/usr/local/bin/jlink",
+    "jmap": "/usr/local/bin/jmap",
+    "jmod": "/usr/local/bin/jmod",
+    "jpackage": "/usr/local/bin/jpackage",
+    "jpegtran": "/usr/local/bin/jpegtran",
+    "jpgicc": "/usr/local/bin/jpgicc",
+    "jps": "/usr/local/bin/jps",
+    "jrunscript": "/usr/local/bin/jrunscript",
+    "jshell": "/usr/local/bin/jshell",
+    "jstack": "/usr/local/bin/jstack",
+    "jstat": "/usr/local/bin/jstat",
+    "jstatd": "/usr/local/bin/jstatd",
+    "jwebserver": "/usr/local/bin/jwebserver",
+    "k5srvutil": "/usr/local/bin/k5srvutil",
+    "kadmin": "/usr/local/bin/kadmin",
+    "kdestroy": "/usr/local/bin/kdestroy",
+    "keyctl": "/usr/local/bin/keyctl",
+    "keytool": "/usr/local/bin/keytool",
+    "kinit": "/usr/local/bin/kinit",
+    "klist": "/usr/local/bin/klist",
+    "kpasswd": "/usr/local/bin/kpasswd",
+    "krb5-config": "/usr/local/bin/krb5-config",
+    "ksu": "/usr/local/bin/ksu",
+    "kswitch": "/usr/local/bin/kswitch",
+    "ktutil": "/usr/local/bin/ktutil",
+    "kvno": "/usr/local/bin/kvno",
+    "ldc-build-runtime": "/usr/local/bin/ldc-build-runtime",
+    "ldc-profdata": "/usr/local/bin/ldc-profdata",
+    "ldc-prune-cache": "/usr/local/bin/ldc-prune-cache",
+    "ldc2": "/usr/local/bin/ldc2",
+    "ldmd2": "/usr/local/bin/ldmd2",
+    "libdeflate-gunzip": "/usr/local/bin/libdeflate-gunzip",
+    "libdeflate-gzip": "/usr/local/bin/libdeflate-gzip",
+    "libpng-config": "/usr/local/bin/libpng-config",
+    "libpng16-config": "/usr/local/bin/libpng16-config",
+    "linkicc": "/usr/local/bin/linkicc",
+    "lz4": "/usr/local/bin/lz4",
+    "lz4c": "/usr/local/bin/lz4c",
+    "lz4cat": "/usr/local/bin/lz4cat",
+    "lzcat": "/usr/local/bin/lzcat",
+    "lzcmp": "/usr/local/bin/lzcmp",
+    "lzdiff": "/usr/local/bin/lzdiff",
+    "lzegrep": "/usr/local/bin/lzegrep",
+    "lzfgrep": "/usr/local/bin/lzfgrep",
+    "lzgrep": "/usr/local/bin/lzgrep",
+    "lzless": "/usr/local/bin/lzless",
+    "lzma": "/usr/local/bin/lzma",
+    "lzmadec": "/usr/local/bin/lzmadec",
+    "lzmainfo": "/usr/local/bin/lzmainfo",
+    "lzmore": "/usr/local/bin/lzmore",
+    "makeconv": "/usr/local/bin/makeconv",
+    "maq2sam-long": "/usr/local/bin/maq2sam-long",
+    "maq2sam-short": "/usr/local/bin/maq2sam-short",
+    "markdups": "/usr/local/bin/markdups",
+    "md5fa": "/usr/local/bin/md5fa",
+    "md5sum-lite": "/usr/local/bin/md5sum-lite",
+    "msgattrib": "/usr/local/bin/msgattrib",
+    "msgcat": "/usr/local/bin/msgcat",
+    "msgcmp": "/usr/local/bin/msgcmp",
+    "msgcomm": "/usr/local/bin/msgcomm",
+    "msgconv": "/usr/local/bin/msgconv",
+    "msgen": "/usr/local/bin/msgen",
+    "msgexec": "/usr/local/bin/msgexec",
+    "msgfilter": "/usr/local/bin/msgfilter",
+    "msgfmt": "/usr/local/bin/msgfmt",
+    "msggrep": "/usr/local/bin/msggrep",
+    "msginit": "/usr/local/bin/msginit",
+    "msgmerge": "/usr/local/bin/msgmerge",
+    "msgunfmt": "/usr/local/bin/msgunfmt",
+    "msguniq": "/usr/local/bin/msguniq",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "ngettext": "/usr/local/bin/ngettext",
+    "nghttp": "/usr/local/bin/nghttp",
+    "nghttpd": "/usr/local/bin/nghttpd",
+    "nghttpx": "/usr/local/bin/nghttpx",
+    "novo2sam.pl": "/usr/local/bin/novo2sam.pl",
+    "openssl": "/usr/local/bin/openssl",
+    "pcre2-config": "/usr/local/bin/pcre2-config",
+    "pcre2_jit_test": "/usr/local/bin/pcre2_jit_test",
+    "pcre2grep": "/usr/local/bin/pcre2grep",
+    "pcre2posix_test": "/usr/local/bin/pcre2posix_test",
+    "pcre2test": "/usr/local/bin/pcre2test",
+    "pkgdata": "/usr/local/bin/pkgdata",
+    "plot-ampliconstats": "/usr/local/bin/plot-ampliconstats",
+    "plot-bamstats": "/usr/local/bin/plot-bamstats",
+    "png-fix-itxt": "/usr/local/bin/png-fix-itxt",
+    "pngfix": "/usr/local/bin/pngfix",
+    "psicc": "/usr/local/bin/psicc",
+    "psl2sam.pl": "/usr/local/bin/psl2sam.pl",
+    "rdjpgcom": "/usr/local/bin/rdjpgcom",
+    "recode-sr-latin": "/usr/local/bin/recode-sr-latin",
+    "reset": "/usr/local/bin/reset",
+    "rmiregistry": "/usr/local/bin/rmiregistry",
+    "sam2vcf.pl": "/usr/local/bin/sam2vcf.pl",
+    "sambamba": "/usr/local/bin/sambamba",
+    "samtools": "/usr/local/bin/samtools",
+    "samtools.pl": "/usr/local/bin/samtools.pl",
+    "sclient": "/usr/local/bin/sclient",
+    "seq_cache_populate.pl": "/usr/local/bin/seq_cache_populate.pl",
+    "serialver": "/usr/local/bin/serialver",
+    "sim_client": "/usr/local/bin/sim_client",
+    "soap2sam.pl": "/usr/local/bin/soap2sam.pl",
+    "tabix": "/usr/local/bin/tabix",
+    "tabs": "/usr/local/bin/tabs",
+    "tic": "/usr/local/bin/tic",
+    "tiffcp": "/usr/local/bin/tiffcp",
+    "tiffdump": "/usr/local/bin/tiffdump",
+    "tiffinfo": "/usr/local/bin/tiffinfo",
+    "tiffset": "/usr/local/bin/tiffset",
+    "tiffsplit": "/usr/local/bin/tiffsplit",
+    "tificc": "/usr/local/bin/tificc",
+    "tjbench": "/usr/local/bin/tjbench",
+    "toe": "/usr/local/bin/toe",
+    "tput": "/usr/local/bin/tput",
+    "transicc": "/usr/local/bin/transicc",
+    "tset": "/usr/local/bin/tset",
+    "unlz4": "/usr/local/bin/unlz4",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unxz": "/usr/local/bin/unxz",
+    "unzstd": "/usr/local/bin/unzstd",
+    "uuclient": "/usr/local/bin/uuclient",
+    "wgsim": "/usr/local/bin/wgsim",
+    "wgsim_eval.pl": "/usr/local/bin/wgsim_eval.pl",
+    "wrjpgcom": "/usr/local/bin/wrjpgcom",
+    "xgettext": "/usr/local/bin/xgettext",
+    "xmlwf": "/usr/local/bin/xmlwf",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore",
+    "zoom2sam.pl": "/usr/local/bin/zoom2sam.pl",
+    "zstd": "/usr/local/bin/zstd",
+    "zstdcat": "/usr/local/bin/zstdcat",
+    "zstdgrep": "/usr/local/bin/zstdgrep",
+    "zstdless": "/usr/local/bin/zstdless",
+    "zstdmt": "/usr/local/bin/zstdmt",
+    "env-execute": "/usr/local/env-execute"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/m/msfragger:4.0--py312hdfd78af_0.json b/quay.io/biocontainers/m/msfragger:4.0--py312hdfd78af_0.json
new file mode 100644
index 0000000..139daf0
--- /dev/null
+++ b/quay.io/biocontainers/m/msfragger:4.0--py312hdfd78af_0.json
@@ -0,0 +1,309 @@
+{
+    "2to3": "/usr/local/bin/2to3",
+    "2to3-3.12": "/usr/local/bin/2to3-3.12",
+    "al": "/usr/local/bin/al",
+    "al2": "/usr/local/bin/al2",
+    "aserver": "/usr/local/bin/aserver",
+    "autopoint": "/usr/local/bin/autopoint",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "cairo-trace": "/usr/local/bin/cairo-trace",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "caspol": "/usr/local/bin/caspol",
+    "cccheck": "/usr/local/bin/cccheck",
+    "ccrewrite": "/usr/local/bin/ccrewrite",
+    "cert-sync": "/usr/local/bin/cert-sync",
+    "cert2spc": "/usr/local/bin/cert2spc",
+    "certmgr": "/usr/local/bin/certmgr",
+    "chktrust": "/usr/local/bin/chktrust",
+    "cjpeg": "/usr/local/bin/cjpeg",
+    "clear": "/usr/local/bin/clear",
+    "compile_et": "/usr/local/bin/compile_et",
+    "crlupdate": "/usr/local/bin/crlupdate",
+    "csc": "/usr/local/bin/csc",
+    "csc-dim": "/usr/local/bin/csc-dim",
+    "csharp": "/usr/local/bin/csharp",
+    "csi": "/usr/local/bin/csi",
+    "cups-config": "/usr/local/bin/cups-config",
+    "derb": "/usr/local/bin/derb",
+    "disco": "/usr/local/bin/disco",
+    "djpeg": "/usr/local/bin/djpeg",
+    "dmcs": "/usr/local/bin/dmcs",
+    "dtd2rng": "/usr/local/bin/dtd2rng",
+    "dtd2xsd": "/usr/local/bin/dtd2xsd",
+    "envsubst": "/usr/local/bin/envsubst",
+    "fc-cache": "/usr/local/bin/fc-cache",
+    "fc-cat": "/usr/local/bin/fc-cat",
+    "fc-conflist": "/usr/local/bin/fc-conflist",
+    "fc-list": "/usr/local/bin/fc-list",
+    "fc-match": "/usr/local/bin/fc-match",
+    "fc-pattern": "/usr/local/bin/fc-pattern",
+    "fc-query": "/usr/local/bin/fc-query",
+    "fc-scan": "/usr/local/bin/fc-scan",
+    "fc-validate": "/usr/local/bin/fc-validate",
+    "freetype-config": "/usr/local/bin/freetype-config",
+    "gacutil": "/usr/local/bin/gacutil",
+    "gacutil2": "/usr/local/bin/gacutil2",
+    "genbrk": "/usr/local/bin/genbrk",
+    "gencfu": "/usr/local/bin/gencfu",
+    "gencnval": "/usr/local/bin/gencnval",
+    "gendict": "/usr/local/bin/gendict",
+    "genrb": "/usr/local/bin/genrb",
+    "genxs": "/usr/local/bin/genxs",
+    "gettext": "/usr/local/bin/gettext",
+    "gettext.sh": "/usr/local/bin/gettext.sh",
+    "gettextize": "/usr/local/bin/gettextize",
+    "gif2rgb": "/usr/local/bin/gif2rgb",
+    "gifbuild": "/usr/local/bin/gifbuild",
+    "gifclrmp": "/usr/local/bin/gifclrmp",
+    "giffix": "/usr/local/bin/giffix",
+    "giftext": "/usr/local/bin/giftext",
+    "giftool": "/usr/local/bin/giftool",
+    "gss-client": "/usr/local/bin/gss-client",
+    "hb-info": "/usr/local/bin/hb-info",
+    "hb-ot-shape-closure": "/usr/local/bin/hb-ot-shape-closure",
+    "hb-shape": "/usr/local/bin/hb-shape",
+    "hb-subset": "/usr/local/bin/hb-subset",
+    "hb-view": "/usr/local/bin/hb-view",
+    "httpcfg": "/usr/local/bin/httpcfg",
+    "icu-config": "/usr/local/bin/icu-config",
+    "icuexportdata": "/usr/local/bin/icuexportdata",
+    "icuinfo": "/usr/local/bin/icuinfo",
+    "idle3": "/usr/local/bin/idle3",
+    "idle3.12": "/usr/local/bin/idle3.12",
+    "ikdasm": "/usr/local/bin/ikdasm",
+    "ilasm": "/usr/local/bin/ilasm",
+    "illinkanalyzer": "/usr/local/bin/illinkanalyzer",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "installvst": "/usr/local/bin/installvst",
+    "ippeveprinter": "/usr/local/bin/ippeveprinter",
+    "ipptool": "/usr/local/bin/ipptool",
+    "jar": "/usr/local/bin/jar",
+    "jarsigner": "/usr/local/bin/jarsigner",
+    "java": "/usr/local/bin/java",
+    "javac": "/usr/local/bin/javac",
+    "javadoc": "/usr/local/bin/javadoc",
+    "javap": "/usr/local/bin/javap",
+    "jcmd": "/usr/local/bin/jcmd",
+    "jconsole": "/usr/local/bin/jconsole",
+    "jdb": "/usr/local/bin/jdb",
+    "jdeprscan": "/usr/local/bin/jdeprscan",
+    "jdeps": "/usr/local/bin/jdeps",
+    "jfr": "/usr/local/bin/jfr",
+    "jhsdb": "/usr/local/bin/jhsdb",
+    "jimage": "/usr/local/bin/jimage",
+    "jinfo": "/usr/local/bin/jinfo",
+    "jlink": "/usr/local/bin/jlink",
+    "jmap": "/usr/local/bin/jmap",
+    "jmod": "/usr/local/bin/jmod",
+    "jpackage": "/usr/local/bin/jpackage",
+    "jpegtran": "/usr/local/bin/jpegtran",
+    "jpgicc": "/usr/local/bin/jpgicc",
+    "jps": "/usr/local/bin/jps",
+    "jrunscript": "/usr/local/bin/jrunscript",
+    "jshell": "/usr/local/bin/jshell",
+    "jstack": "/usr/local/bin/jstack",
+    "jstat": "/usr/local/bin/jstat",
+    "jstatd": "/usr/local/bin/jstatd",
+    "jwebserver": "/usr/local/bin/jwebserver",
+    "k5srvutil": "/usr/local/bin/k5srvutil",
+    "kadmin": "/usr/local/bin/kadmin",
+    "kdestroy": "/usr/local/bin/kdestroy",
+    "keyctl": "/usr/local/bin/keyctl",
+    "keytool": "/usr/local/bin/keytool",
+    "kinit": "/usr/local/bin/kinit",
+    "klist": "/usr/local/bin/klist",
+    "kpasswd": "/usr/local/bin/kpasswd",
+    "krb5-config": "/usr/local/bin/krb5-config",
+    "ksu": "/usr/local/bin/ksu",
+    "kswitch": "/usr/local/bin/kswitch",
+    "ktutil": "/usr/local/bin/ktutil",
+    "kvno": "/usr/local/bin/kvno",
+    "lc": "/usr/local/bin/lc",
+    "libdeflate-gunzip": "/usr/local/bin/libdeflate-gunzip",
+    "libdeflate-gzip": "/usr/local/bin/libdeflate-gzip",
+    "libpng-config": "/usr/local/bin/libpng-config",
+    "libpng16-config": "/usr/local/bin/libpng16-config",
+    "linkicc": "/usr/local/bin/linkicc",
+    "lzcat": "/usr/local/bin/lzcat",
+    "lzcmp": "/usr/local/bin/lzcmp",
+    "lzdiff": "/usr/local/bin/lzdiff",
+    "lzegrep": "/usr/local/bin/lzegrep",
+    "lzfgrep": "/usr/local/bin/lzfgrep",
+    "lzgrep": "/usr/local/bin/lzgrep",
+    "lzless": "/usr/local/bin/lzless",
+    "lzma": "/usr/local/bin/lzma",
+    "lzmadec": "/usr/local/bin/lzmadec",
+    "lzmainfo": "/usr/local/bin/lzmainfo",
+    "lzmore": "/usr/local/bin/lzmore",
+    "macpack": "/usr/local/bin/macpack",
+    "makecert": "/usr/local/bin/makecert",
+    "makeconv": "/usr/local/bin/makeconv",
+    "mconfig": "/usr/local/bin/mconfig",
+    "mcs": "/usr/local/bin/mcs",
+    "mdassembler": "/usr/local/bin/mdassembler",
+    "mdbrebase": "/usr/local/bin/mdbrebase",
+    "mdoc": "/usr/local/bin/mdoc",
+    "mdoc-assemble": "/usr/local/bin/mdoc-assemble",
+    "mdoc-export-html": "/usr/local/bin/mdoc-export-html",
+    "mdoc-export-msxdoc": "/usr/local/bin/mdoc-export-msxdoc",
+    "mdoc-update": "/usr/local/bin/mdoc-update",
+    "mdoc-validate": "/usr/local/bin/mdoc-validate",
+    "mdvalidater": "/usr/local/bin/mdvalidater",
+    "mkbundle": "/usr/local/bin/mkbundle",
+    "mod": "/usr/local/bin/mod",
+    "mono": "/usr/local/bin/mono",
+    "mono-api-html": "/usr/local/bin/mono-api-html",
+    "mono-api-info": "/usr/local/bin/mono-api-info",
+    "mono-boehm": "/usr/local/bin/mono-boehm",
+    "mono-cil-strip": "/usr/local/bin/mono-cil-strip",
+    "mono-configuration-crypto": "/usr/local/bin/mono-configuration-crypto",
+    "mono-find-provides": "/usr/local/bin/mono-find-provides",
+    "mono-find-requires": "/usr/local/bin/mono-find-requires",
+    "mono-gdb.py": "/usr/local/bin/mono-gdb.py",
+    "mono-heapviz": "/usr/local/bin/mono-heapviz",
+    "mono-package-runtime": "/usr/local/bin/mono-package-runtime",
+    "mono-service": "/usr/local/bin/mono-service",
+    "mono-service2": "/usr/local/bin/mono-service2",
+    "mono-sgen": "/usr/local/bin/mono-sgen",
+    "mono-sgen-gdb.py": "/usr/local/bin/mono-sgen-gdb.py",
+    "mono-shlib-cop": "/usr/local/bin/mono-shlib-cop",
+    "mono-symbolicate": "/usr/local/bin/mono-symbolicate",
+    "mono-test-install": "/usr/local/bin/mono-test-install",
+    "mono-xmltool": "/usr/local/bin/mono-xmltool",
+    "monodis": "/usr/local/bin/monodis",
+    "monodocer": "/usr/local/bin/monodocer",
+    "monodocs2html": "/usr/local/bin/monodocs2html",
+    "monodocs2slashdoc": "/usr/local/bin/monodocs2slashdoc",
+    "monograph": "/usr/local/bin/monograph",
+    "monolinker": "/usr/local/bin/monolinker",
+    "monop": "/usr/local/bin/monop",
+    "monop2": "/usr/local/bin/monop2",
+    "mozroots": "/usr/local/bin/mozroots",
+    "mprof-report": "/usr/local/bin/mprof-report",
+    "msfragger": "/usr/local/bin/msfragger",
+    "msgattrib": "/usr/local/bin/msgattrib",
+    "msgcat": "/usr/local/bin/msgcat",
+    "msgcmp": "/usr/local/bin/msgcmp",
+    "msgcomm": "/usr/local/bin/msgcomm",
+    "msgconv": "/usr/local/bin/msgconv",
+    "msgen": "/usr/local/bin/msgen",
+    "msgexec": "/usr/local/bin/msgexec",
+    "msgfilter": "/usr/local/bin/msgfilter",
+    "msgfmt": "/usr/local/bin/msgfmt",
+    "msggrep": "/usr/local/bin/msggrep",
+    "msginit": "/usr/local/bin/msginit",
+    "msgmerge": "/usr/local/bin/msgmerge",
+    "msgunfmt": "/usr/local/bin/msgunfmt",
+    "msguniq": "/usr/local/bin/msguniq",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "ngettext": "/usr/local/bin/ngettext",
+    "nunit-console": "/usr/local/bin/nunit-console",
+    "nunit-console2": "/usr/local/bin/nunit-console2",
+    "nunit-console4": "/usr/local/bin/nunit-console4",
+    "openssl": "/usr/local/bin/openssl",
+    "pcre2-config": "/usr/local/bin/pcre2-config",
+    "pcre2_jit_test": "/usr/local/bin/pcre2_jit_test",
+    "pcre2grep": "/usr/local/bin/pcre2grep",
+    "pcre2posix_test": "/usr/local/bin/pcre2posix_test",
+    "pcre2test": "/usr/local/bin/pcre2test",
+    "pdb2mdb": "/usr/local/bin/pdb2mdb",
+    "pedump": "/usr/local/bin/pedump",
+    "permview": "/usr/local/bin/permview",
+    "peverify": "/usr/local/bin/peverify",
+    "pip": "/usr/local/bin/pip",
+    "pip3": "/usr/local/bin/pip3",
+    "pkgdata": "/usr/local/bin/pkgdata",
+    "png-fix-itxt": "/usr/local/bin/png-fix-itxt",
+    "pngfix": "/usr/local/bin/pngfix",
+    "psicc": "/usr/local/bin/psicc",
+    "pydoc": "/usr/local/bin/pydoc",
+    "pydoc3": "/usr/local/bin/pydoc3",
+    "pydoc3.12": "/usr/local/bin/pydoc3.12",
+    "python": "/usr/local/bin/python",
+    "python3": "/usr/local/bin/python3",
+    "python3-config": "/usr/local/bin/python3-config",
+    "python3.1": "/usr/local/bin/python3.1",
+    "python3.12": "/usr/local/bin/python3.12",
+    "python3.12-config": "/usr/local/bin/python3.12-config",
+    "rdjpgcom": "/usr/local/bin/rdjpgcom",
+    "recode-sr-latin": "/usr/local/bin/recode-sr-latin",
+    "reset": "/usr/local/bin/reset",
+    "resgen": "/usr/local/bin/resgen",
+    "resgen2": "/usr/local/bin/resgen2",
+    "rmiregistry": "/usr/local/bin/rmiregistry",
+    "sclient": "/usr/local/bin/sclient",
+    "secutil": "/usr/local/bin/secutil",
+    "serialver": "/usr/local/bin/serialver",
+    "setreg": "/usr/local/bin/setreg",
+    "sgen": "/usr/local/bin/sgen",
+    "sgen-grep-binprot": "/usr/local/bin/sgen-grep-binprot",
+    "signcode": "/usr/local/bin/signcode",
+    "sim_client": "/usr/local/bin/sim_client",
+    "sn": "/usr/local/bin/sn",
+    "soapsuds": "/usr/local/bin/soapsuds",
+    "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
+    "sqlmetal": "/usr/local/bin/sqlmetal",
+    "sqlsharp": "/usr/local/bin/sqlsharp",
+    "svcutil": "/usr/local/bin/svcutil",
+    "tabs": "/usr/local/bin/tabs",
+    "tclsh": "/usr/local/bin/tclsh",
+    "tclsh8.6": "/usr/local/bin/tclsh8.6",
+    "tic": "/usr/local/bin/tic",
+    "tiffcp": "/usr/local/bin/tiffcp",
+    "tiffdump": "/usr/local/bin/tiffdump",
+    "tiffinfo": "/usr/local/bin/tiffinfo",
+    "tiffset": "/usr/local/bin/tiffset",
+    "tiffsplit": "/usr/local/bin/tiffsplit",
+    "tificc": "/usr/local/bin/tificc",
+    "tjbench": "/usr/local/bin/tjbench",
+    "toe": "/usr/local/bin/toe",
+    "tput": "/usr/local/bin/tput",
+    "transicc": "/usr/local/bin/transicc",
+    "tset": "/usr/local/bin/tset",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unxz": "/usr/local/bin/unxz",
+    "unzstd": "/usr/local/bin/unzstd",
+    "uuclient": "/usr/local/bin/uuclient",
+    "vbc": "/usr/local/bin/vbc",
+    "wheel": "/usr/local/bin/wheel",
+    "wish": "/usr/local/bin/wish",
+    "wish8.6": "/usr/local/bin/wish8.6",
+    "wrjpgcom": "/usr/local/bin/wrjpgcom",
+    "wsdl": "/usr/local/bin/wsdl",
+    "wsdl2": "/usr/local/bin/wsdl2",
+    "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
+    "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
+    "xbuild": "/usr/local/bin/xbuild",
+    "xgettext": "/usr/local/bin/xgettext",
+    "xmlwf": "/usr/local/bin/xmlwf",
+    "xsd": "/usr/local/bin/xsd",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore",
+    "zstd": "/usr/local/bin/zstd",
+    "zstdcat": "/usr/local/bin/zstdcat",
+    "zstdgrep": "/usr/local/bin/zstdgrep",
+    "zstdless": "/usr/local/bin/zstdless",
+    "zstdmt": "/usr/local/bin/zstdmt",
+    "env-execute": "/usr/local/env-execute"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/m/multirnafold:2.1--h4ac6f70_0.json b/quay.io/biocontainers/m/multirnafold:2.1--h4ac6f70_0.json
new file mode 100644
index 0000000..1877e49
--- /dev/null
+++ b/quay.io/biocontainers/m/multirnafold:2.1--h4ac6f70_0.json
@@ -0,0 +1,9 @@
+{
+    "feature_description": "/usr/local/bin/feature_description",
+    "multifold": "/usr/local/bin/multifold",
+    "pairfold": "/usr/local/bin/pairfold",
+    "pairfold-web": "/usr/local/bin/pairfold-web",
+    "simfold": "/usr/local/bin/simfold",
+    "simfold_pf": "/usr/local/bin/simfold_pf",
+    "env-execute": "/usr/local/env-execute"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/n/ntsynt:1.0.0--py39h1f90b4d_0.json b/quay.io/biocontainers/n/ntsynt:1.0.0--py39h1f90b4d_0.json
new file mode 100644
index 0000000..0c94ee4
--- /dev/null
+++ b/quay.io/biocontainers/n/ntsynt:1.0.0--py39h1f90b4d_0.json
@@ -0,0 +1,298 @@
+{
+    "2to3": "/usr/local/bin/2to3",
+    "2to3-3.9": "/usr/local/bin/2to3-3.9",
+    "ace2sam": "/usr/local/bin/ace2sam",
+    "adig": "/usr/local/bin/adig",
+    "ahost": "/usr/local/bin/ahost",
+    "annot-tsv": "/usr/local/bin/annot-tsv",
+    "annotateBed": "/usr/local/bin/annotateBed",
+    "assembly_block.py": "/usr/local/bin/assembly_block.py",
+    "autopoint": "/usr/local/bin/autopoint",
+    "bamToBed": "/usr/local/bin/bamToBed",
+    "bamToFastq": "/usr/local/bin/bamToFastq",
+    "bed12ToBed6": "/usr/local/bin/bed12ToBed6",
+    "bedToBam": "/usr/local/bin/bedToBam",
+    "bedToIgv": "/usr/local/bin/bedToIgv",
+    "bedpeToBam": "/usr/local/bin/bedpeToBam",
+    "bedtools": "/usr/local/bin/bedtools",
+    "bgzip": "/usr/local/bin/bgzip",
+    "blast2sam.pl": "/usr/local/bin/blast2sam.pl",
+    "bowtie2sam.pl": "/usr/local/bin/bowtie2sam.pl",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "cbc": "/usr/local/bin/cbc",
+    "clear": "/usr/local/bin/clear",
+    "closestBed": "/usr/local/bin/closestBed",
+    "clp": "/usr/local/bin/clp",
+    "clusterBed": "/usr/local/bin/clusterBed",
+    "compile_et": "/usr/local/bin/compile_et",
+    "complementBed": "/usr/local/bin/complementBed",
+    "coverageBed": "/usr/local/bin/coverageBed",
+    "curl-config": "/usr/local/bin/curl-config",
+    "derb": "/usr/local/bin/derb",
+    "docutils": "/usr/local/bin/docutils",
+    "eido": "/usr/local/bin/eido",
+    "envsubst": "/usr/local/bin/envsubst",
+    "expandCols": "/usr/local/bin/expandCols",
+    "export2sam.pl": "/usr/local/bin/export2sam.pl",
+    "f2py": "/usr/local/bin/f2py",
+    "fasta-sanitize.pl": "/usr/local/bin/fasta-sanitize.pl",
+    "fastaFromBed": "/usr/local/bin/fastaFromBed",
+    "flankBed": "/usr/local/bin/flankBed",
+    "genbrk": "/usr/local/bin/genbrk",
+    "gencfu": "/usr/local/bin/gencfu",
+    "gencnval": "/usr/local/bin/gencnval",
+    "gendict": "/usr/local/bin/gendict",
+    "genomeCoverageBed": "/usr/local/bin/genomeCoverageBed",
+    "genrb": "/usr/local/bin/genrb",
+    "getOverlap": "/usr/local/bin/getOverlap",
+    "gettext": "/usr/local/bin/gettext",
+    "gettext.sh": "/usr/local/bin/gettext.sh",
+    "gettextize": "/usr/local/bin/gettextize",
+    "glpsol": "/usr/local/bin/glpsol",
+    "groupBy": "/usr/local/bin/groupBy",
+    "grpc_cpp_plugin": "/usr/local/bin/grpc_cpp_plugin",
+    "grpc_csharp_plugin": "/usr/local/bin/grpc_csharp_plugin",
+    "grpc_node_plugin": "/usr/local/bin/grpc_node_plugin",
+    "grpc_objective_c_plugin": "/usr/local/bin/grpc_objective_c_plugin",
+    "grpc_php_plugin": "/usr/local/bin/grpc_php_plugin",
+    "grpc_python_plugin": "/usr/local/bin/grpc_python_plugin",
+    "grpc_ruby_plugin": "/usr/local/bin/grpc_ruby_plugin",
+    "gss-client": "/usr/local/bin/gss-client",
+    "gunzip": "/usr/local/bin/gunzip",
+    "gzexe": "/usr/local/bin/gzexe",
+    "gzip": "/usr/local/bin/gzip",
+    "htsfile": "/usr/local/bin/htsfile",
+    "humanfriendly": "/usr/local/bin/humanfriendly",
+    "icu-config": "/usr/local/bin/icu-config",
+    "icuexportdata": "/usr/local/bin/icuexportdata",
+    "icuinfo": "/usr/local/bin/icuinfo",
+    "idle3": "/usr/local/bin/idle3",
+    "idle3.9": "/usr/local/bin/idle3.9",
+    "idn2": "/usr/local/bin/idn2",
+    "igraph": "/usr/local/bin/igraph",
+    "indexlr": "/usr/local/bin/indexlr",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "interpolate_sam.pl": "/usr/local/bin/interpolate_sam.pl",
+    "intersectBed": "/usr/local/bin/intersectBed",
+    "jp.py": "/usr/local/bin/jp.py",
+    "jsonschema": "/usr/local/bin/jsonschema",
+    "jupyter": "/usr/local/bin/jupyter",
+    "jupyter-migrate": "/usr/local/bin/jupyter-migrate",
+    "jupyter-troubleshoot": "/usr/local/bin/jupyter-troubleshoot",
+    "jupyter-trust": "/usr/local/bin/jupyter-trust",
+    "k5srvutil": "/usr/local/bin/k5srvutil",
+    "kadmin": "/usr/local/bin/kadmin",
+    "kdestroy": "/usr/local/bin/kdestroy",
+    "keyctl": "/usr/local/bin/keyctl",
+    "kinit": "/usr/local/bin/kinit",
+    "klist": "/usr/local/bin/klist",
+    "kpasswd": "/usr/local/bin/kpasswd",
+    "krb5-config": "/usr/local/bin/krb5-config",
+    "ksu": "/usr/local/bin/ksu",
+    "kswitch": "/usr/local/bin/kswitch",
+    "ktutil": "/usr/local/bin/ktutil",
+    "kvno": "/usr/local/bin/kvno",
+    "libdeflate-gunzip": "/usr/local/bin/libdeflate-gunzip",
+    "libdeflate-gzip": "/usr/local/bin/libdeflate-gzip",
+    "linksBed": "/usr/local/bin/linksBed",
+    "lrunzip": "/usr/local/bin/lrunzip",
+    "lrzcat": "/usr/local/bin/lrzcat",
+    "lrzip": "/usr/local/bin/lrzip",
+    "lrztar": "/usr/local/bin/lrztar",
+    "lrzuntar": "/usr/local/bin/lrzuntar",
+    "lzcat": "/usr/local/bin/lzcat",
+    "lzcmp": "/usr/local/bin/lzcmp",
+    "lzdiff": "/usr/local/bin/lzdiff",
+    "lzegrep": "/usr/local/bin/lzegrep",
+    "lzfgrep": "/usr/local/bin/lzfgrep",
+    "lzgrep": "/usr/local/bin/lzgrep",
+    "lzless": "/usr/local/bin/lzless",
+    "lzma": "/usr/local/bin/lzma",
+    "lzmadec": "/usr/local/bin/lzmadec",
+    "lzmainfo": "/usr/local/bin/lzmainfo",
+    "lzmore": "/usr/local/bin/lzmore",
+    "makeconv": "/usr/local/bin/makeconv",
+    "mapBed": "/usr/local/bin/mapBed",
+    "maq2sam-long": "/usr/local/bin/maq2sam-long",
+    "maq2sam-short": "/usr/local/bin/maq2sam-short",
+    "markdown-it": "/usr/local/bin/markdown-it",
+    "maskFastaFromBed": "/usr/local/bin/maskFastaFromBed",
+    "md5fa": "/usr/local/bin/md5fa",
+    "md5sum-lite": "/usr/local/bin/md5sum-lite",
+    "mergeBed": "/usr/local/bin/mergeBed",
+    "mi_bf_generate": "/usr/local/bin/mi_bf_generate",
+    "msgattrib": "/usr/local/bin/msgattrib",
+    "msgcat": "/usr/local/bin/msgcat",
+    "msgcmp": "/usr/local/bin/msgcmp",
+    "msgcomm": "/usr/local/bin/msgcomm",
+    "msgconv": "/usr/local/bin/msgconv",
+    "msgen": "/usr/local/bin/msgen",
+    "msgexec": "/usr/local/bin/msgexec",
+    "msgfilter": "/usr/local/bin/msgfilter",
+    "msgfmt": "/usr/local/bin/msgfmt",
+    "msggrep": "/usr/local/bin/msggrep",
+    "msginit": "/usr/local/bin/msginit",
+    "msgmerge": "/usr/local/bin/msgmerge",
+    "msgunfmt": "/usr/local/bin/msgunfmt",
+    "msguniq": "/usr/local/bin/msguniq",
+    "multiBamCov": "/usr/local/bin/multiBamCov",
+    "multiIntersectBed": "/usr/local/bin/multiIntersectBed",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "ngettext": "/usr/local/bin/ngettext",
+    "nghttp": "/usr/local/bin/nghttp",
+    "nghttpd": "/usr/local/bin/nghttpd",
+    "nghttpx": "/usr/local/bin/nghttpx",
+    "normalizer": "/usr/local/bin/normalizer",
+    "novo2sam.pl": "/usr/local/bin/novo2sam.pl",
+    "ntSynt": "/usr/local/bin/ntSynt",
+    "ntjoin.py": "/usr/local/bin/ntjoin.py",
+    "ntjoin_utils.py": "/usr/local/bin/ntjoin_utils.py",
+    "ntsynt_make_common_bf": "/usr/local/bin/ntsynt_make_common_bf",
+    "ntsynt_make_repeat_bfs.py": "/usr/local/bin/ntsynt_make_repeat_bfs.py",
+    "ntsynt_run.py": "/usr/local/bin/ntsynt_run.py",
+    "ntsynt_run_pipeline.smk": "/usr/local/bin/ntsynt_run_pipeline.smk",
+    "ntsynt_synteny.py": "/usr/local/bin/ntsynt_synteny.py",
+    "nucBed": "/usr/local/bin/nucBed",
+    "openssl": "/usr/local/bin/openssl",
+    "pairToBed": "/usr/local/bin/pairToBed",
+    "pairToPair": "/usr/local/bin/pairToPair",
+    "pigz": "/usr/local/bin/pigz",
+    "pip": "/usr/local/bin/pip",
+    "pip3": "/usr/local/bin/pip3",
+    "pkgdata": "/usr/local/bin/pkgdata",
+    "plac_runner.py": "/usr/local/bin/plac_runner.py",
+    "plot-ampliconstats": "/usr/local/bin/plot-ampliconstats",
+    "plot-bamstats": "/usr/local/bin/plot-bamstats",
+    "protoc": "/usr/local/bin/protoc",
+    "protoc-25.1.0": "/usr/local/bin/protoc-25.1.0",
+    "psl2sam.pl": "/usr/local/bin/psl2sam.pl",
+    "pulptest": "/usr/local/bin/pulptest",
+    "py.test": "/usr/local/bin/py.test",
+    "pydoc": "/usr/local/bin/pydoc",
+    "pydoc3": "/usr/local/bin/pydoc3",
+    "pydoc3.9": "/usr/local/bin/pydoc3.9",
+    "pygmentize": "/usr/local/bin/pygmentize",
+    "pyrsa-decrypt": "/usr/local/bin/pyrsa-decrypt",
+    "pyrsa-encrypt": "/usr/local/bin/pyrsa-encrypt",
+    "pyrsa-keygen": "/usr/local/bin/pyrsa-keygen",
+    "pyrsa-priv2pub": "/usr/local/bin/pyrsa-priv2pub",
+    "pyrsa-sign": "/usr/local/bin/pyrsa-sign",
+    "pyrsa-verify": "/usr/local/bin/pyrsa-verify",
+    "pytest": "/usr/local/bin/pytest",
+    "python": "/usr/local/bin/python",
+    "python3": "/usr/local/bin/python3",
+    "python3-config": "/usr/local/bin/python3-config",
+    "python3.9": "/usr/local/bin/python3.9",
+    "python3.9-config": "/usr/local/bin/python3.9-config",
+    "randomBed": "/usr/local/bin/randomBed",
+    "randseq": "/usr/local/bin/randseq",
+    "recode-sr-latin": "/usr/local/bin/recode-sr-latin",
+    "reset": "/usr/local/bin/reset",
+    "rst2html.py": "/usr/local/bin/rst2html.py",
+    "rst2html4.py": "/usr/local/bin/rst2html4.py",
+    "rst2html5.py": "/usr/local/bin/rst2html5.py",
+    "rst2latex.py": "/usr/local/bin/rst2latex.py",
+    "rst2man.py": "/usr/local/bin/rst2man.py",
+    "rst2odt.py": "/usr/local/bin/rst2odt.py",
+    "rst2odt_prepstyles.py": "/usr/local/bin/rst2odt_prepstyles.py",
+    "rst2pseudoxml.py": "/usr/local/bin/rst2pseudoxml.py",
+    "rst2s5.py": "/usr/local/bin/rst2s5.py",
+    "rst2xetex.py": "/usr/local/bin/rst2xetex.py",
+    "rst2xml.py": "/usr/local/bin/rst2xml.py",
+    "rstpep2html.py": "/usr/local/bin/rstpep2html.py",
+    "sam2vcf.pl": "/usr/local/bin/sam2vcf.pl",
+    "samtools": "/usr/local/bin/samtools",
+    "samtools.pl": "/usr/local/bin/samtools.pl",
+    "sclient": "/usr/local/bin/sclient",
+    "seq_cache_populate.pl": "/usr/local/bin/seq_cache_populate.pl",
+    "seqtk": "/usr/local/bin/seqtk",
+    "shiftBed": "/usr/local/bin/shiftBed",
+    "shuffleBed": "/usr/local/bin/shuffleBed",
+    "sim_client": "/usr/local/bin/sim_client",
+    "slopBed": "/usr/local/bin/slopBed",
+    "snakemake": "/usr/local/bin/snakemake",
+    "snakemake-bash-completion": "/usr/local/bin/snakemake-bash-completion",
+    "soap2sam.pl": "/usr/local/bin/soap2sam.pl",
+    "sortBed": "/usr/local/bin/sortBed",
+    "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
+    "stone": "/usr/local/bin/stone",
+    "subtractBed": "/usr/local/bin/subtractBed",
+    "synteny_block.py": "/usr/local/bin/synteny_block.py",
+    "tabix": "/usr/local/bin/tabix",
+    "tabs": "/usr/local/bin/tabs",
+    "tabulate": "/usr/local/bin/tabulate",
+    "tagBam": "/usr/local/bin/tagBam",
+    "tar": "/usr/local/bin/tar",
+    "tclsh": "/usr/local/bin/tclsh",
+    "tclsh8.6": "/usr/local/bin/tclsh8.6",
+    "tic": "/usr/local/bin/tic",
+    "toe": "/usr/local/bin/toe",
+    "tput": "/usr/local/bin/tput",
+    "tset": "/usr/local/bin/tset",
+    "uncompress": "/usr/local/bin/uncompress",
+    "unionBedGraphs": "/usr/local/bin/unionBedGraphs",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unpigz": "/usr/local/bin/unpigz",
+    "unxz": "/usr/local/bin/unxz",
+    "unzstd": "/usr/local/bin/unzstd",
+    "uuclient": "/usr/local/bin/uuclient",
+    "wget": "/usr/local/bin/wget",
+    "wgsim": "/usr/local/bin/wgsim",
+    "wgsim_eval.pl": "/usr/local/bin/wgsim_eval.pl",
+    "wheel": "/usr/local/bin/wheel",
+    "windowBed": "/usr/local/bin/windowBed",
+    "windowMaker": "/usr/local/bin/windowMaker",
+    "wish": "/usr/local/bin/wish",
+    "wish8.6": "/usr/local/bin/wish8.6",
+    "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
+    "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
+    "xgettext": "/usr/local/bin/xgettext",
+    "xml2-config": "/usr/local/bin/xml2-config",
+    "xmlcatalog": "/usr/local/bin/xmlcatalog",
+    "xmllint": "/usr/local/bin/xmllint",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore",
+    "yte": "/usr/local/bin/yte",
+    "zcat": "/usr/local/bin/zcat",
+    "zcmp": "/usr/local/bin/zcmp",
+    "zdiff": "/usr/local/bin/zdiff",
+    "zegrep": "/usr/local/bin/zegrep",
+    "zfgrep": "/usr/local/bin/zfgrep",
+    "zforce": "/usr/local/bin/zforce",
+    "zgrep": "/usr/local/bin/zgrep",
+    "zip": "/usr/local/bin/zip",
+    "zipcloak": "/usr/local/bin/zipcloak",
+    "zipnote": "/usr/local/bin/zipnote",
+    "zipsplit": "/usr/local/bin/zipsplit",
+    "zmore": "/usr/local/bin/zmore",
+    "znew": "/usr/local/bin/znew",
+    "zoom2sam.pl": "/usr/local/bin/zoom2sam.pl",
+    "zstd": "/usr/local/bin/zstd",
+    "zstdcat": "/usr/local/bin/zstdcat",
+    "zstdgrep": "/usr/local/bin/zstdgrep",
+    "zstdless": "/usr/local/bin/zstdless",
+    "zstdmt": "/usr/local/bin/zstdmt",
+    "env-execute": "/usr/local/env-execute"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/p/peer:1.3--hdbdd923_0.json b/quay.io/biocontainers/p/peer:1.3--hdbdd923_0.json
new file mode 100644
index 0000000..32407e0
--- /dev/null
+++ b/quay.io/biocontainers/p/peer:1.3--hdbdd923_0.json
@@ -0,0 +1,4 @@
+{
+    "peertool": "/usr/local/bin/peertool",
+    "env-execute": "/usr/local/env-execute"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/p/pybigtools:0.1.0--py38h61b5871_0.json b/quay.io/biocontainers/p/pybigtools:0.1.0--py38h61b5871_0.json
new file mode 100644
index 0000000..4892384
--- /dev/null
+++ b/quay.io/biocontainers/p/pybigtools:0.1.0--py38h61b5871_0.json
@@ -0,0 +1,76 @@
+{
+    "2to3": "/usr/local/bin/2to3",
+    "2to3-3.8": "/usr/local/bin/2to3-3.8",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "clear": "/usr/local/bin/clear",
+    "f2py": "/usr/local/bin/f2py",
+    "f2py3": "/usr/local/bin/f2py3",
+    "f2py3.8": "/usr/local/bin/f2py3.8",
+    "idle3": "/usr/local/bin/idle3",
+    "idle3.8": "/usr/local/bin/idle3.8",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "lzcat": "/usr/local/bin/lzcat",
+    "lzcmp": "/usr/local/bin/lzcmp",
+    "lzdiff": "/usr/local/bin/lzdiff",
+    "lzegrep": "/usr/local/bin/lzegrep",
+    "lzfgrep": "/usr/local/bin/lzfgrep",
+    "lzgrep": "/usr/local/bin/lzgrep",
+    "lzless": "/usr/local/bin/lzless",
+    "lzma": "/usr/local/bin/lzma",
+    "lzmadec": "/usr/local/bin/lzmadec",
+    "lzmainfo": "/usr/local/bin/lzmainfo",
+    "lzmore": "/usr/local/bin/lzmore",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "openssl": "/usr/local/bin/openssl",
+    "pip": "/usr/local/bin/pip",
+    "pip3": "/usr/local/bin/pip3",
+    "pydoc": "/usr/local/bin/pydoc",
+    "pydoc3": "/usr/local/bin/pydoc3",
+    "pydoc3.8": "/usr/local/bin/pydoc3.8",
+    "python": "/usr/local/bin/python",
+    "python3": "/usr/local/bin/python3",
+    "python3-config": "/usr/local/bin/python3-config",
+    "python3.8": "/usr/local/bin/python3.8",
+    "python3.8-config": "/usr/local/bin/python3.8-config",
+    "reset": "/usr/local/bin/reset",
+    "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
+    "tabs": "/usr/local/bin/tabs",
+    "tclsh": "/usr/local/bin/tclsh",
+    "tclsh8.6": "/usr/local/bin/tclsh8.6",
+    "tic": "/usr/local/bin/tic",
+    "toe": "/usr/local/bin/toe",
+    "tput": "/usr/local/bin/tput",
+    "tset": "/usr/local/bin/tset",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unxz": "/usr/local/bin/unxz",
+    "wheel": "/usr/local/bin/wheel",
+    "wish": "/usr/local/bin/wish",
+    "wish8.6": "/usr/local/bin/wish8.6",
+    "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
+    "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore",
+    "env-execute": "/usr/local/env-execute"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/p/pytransaln:0.2.1--pyh7cba7a3_0.json b/quay.io/biocontainers/p/pytransaln:0.2.1--pyh7cba7a3_0.json
new file mode 100644
index 0000000..a11cc7a
--- /dev/null
+++ b/quay.io/biocontainers/p/pytransaln:0.2.1--pyh7cba7a3_0.json
@@ -0,0 +1,113 @@
+{
+    "2to3": "/usr/local/bin/2to3",
+    "2to3-3.10": "/usr/local/bin/2to3-3.10",
+    "brotli": "/usr/local/bin/brotli",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "cjpeg": "/usr/local/bin/cjpeg",
+    "clear": "/usr/local/bin/clear",
+    "djpeg": "/usr/local/bin/djpeg",
+    "f2py": "/usr/local/bin/f2py",
+    "fonttools": "/usr/local/bin/fonttools",
+    "freetype-config": "/usr/local/bin/freetype-config",
+    "idle3": "/usr/local/bin/idle3",
+    "idle3.10": "/usr/local/bin/idle3.10",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "jpegtran": "/usr/local/bin/jpegtran",
+    "jpgicc": "/usr/local/bin/jpgicc",
+    "libdeflate-gunzip": "/usr/local/bin/libdeflate-gunzip",
+    "libdeflate-gzip": "/usr/local/bin/libdeflate-gzip",
+    "libpng-config": "/usr/local/bin/libpng-config",
+    "libpng16-config": "/usr/local/bin/libpng16-config",
+    "linkicc": "/usr/local/bin/linkicc",
+    "lzcat": "/usr/local/bin/lzcat",
+    "lzcmp": "/usr/local/bin/lzcmp",
+    "lzdiff": "/usr/local/bin/lzdiff",
+    "lzegrep": "/usr/local/bin/lzegrep",
+    "lzfgrep": "/usr/local/bin/lzfgrep",
+    "lzgrep": "/usr/local/bin/lzgrep",
+    "lzless": "/usr/local/bin/lzless",
+    "lzma": "/usr/local/bin/lzma",
+    "lzmadec": "/usr/local/bin/lzmadec",
+    "lzmainfo": "/usr/local/bin/lzmainfo",
+    "lzmore": "/usr/local/bin/lzmore",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "openssl": "/usr/local/bin/openssl",
+    "opj_compress": "/usr/local/bin/opj_compress",
+    "opj_decompress": "/usr/local/bin/opj_decompress",
+    "opj_dump": "/usr/local/bin/opj_dump",
+    "pip": "/usr/local/bin/pip",
+    "pip3": "/usr/local/bin/pip3",
+    "png-fix-itxt": "/usr/local/bin/png-fix-itxt",
+    "pngfix": "/usr/local/bin/pngfix",
+    "psicc": "/usr/local/bin/psicc",
+    "pydoc": "/usr/local/bin/pydoc",
+    "pydoc3": "/usr/local/bin/pydoc3",
+    "pydoc3.10": "/usr/local/bin/pydoc3.10",
+    "pyftmerge": "/usr/local/bin/pyftmerge",
+    "pyftsubset": "/usr/local/bin/pyftsubset",
+    "python": "/usr/local/bin/python",
+    "python3": "/usr/local/bin/python3",
+    "python3-config": "/usr/local/bin/python3-config",
+    "python3.1": "/usr/local/bin/python3.1",
+    "python3.10": "/usr/local/bin/python3.10",
+    "python3.10-config": "/usr/local/bin/python3.10-config",
+    "pytransaln": "/usr/local/bin/pytransaln",
+    "rdjpgcom": "/usr/local/bin/rdjpgcom",
+    "reset": "/usr/local/bin/reset",
+    "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
+    "tabs": "/usr/local/bin/tabs",
+    "tclsh": "/usr/local/bin/tclsh",
+    "tclsh8.6": "/usr/local/bin/tclsh8.6",
+    "tic": "/usr/local/bin/tic",
+    "tiffcp": "/usr/local/bin/tiffcp",
+    "tiffdump": "/usr/local/bin/tiffdump",
+    "tiffinfo": "/usr/local/bin/tiffinfo",
+    "tiffset": "/usr/local/bin/tiffset",
+    "tiffsplit": "/usr/local/bin/tiffsplit",
+    "tificc": "/usr/local/bin/tificc",
+    "tjbench": "/usr/local/bin/tjbench",
+    "toe": "/usr/local/bin/toe",
+    "tput": "/usr/local/bin/tput",
+    "transicc": "/usr/local/bin/transicc",
+    "tset": "/usr/local/bin/tset",
+    "ttx": "/usr/local/bin/ttx",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unxz": "/usr/local/bin/unxz",
+    "unzstd": "/usr/local/bin/unzstd",
+    "wheel": "/usr/local/bin/wheel",
+    "wish": "/usr/local/bin/wish",
+    "wish8.6": "/usr/local/bin/wish8.6",
+    "wrjpgcom": "/usr/local/bin/wrjpgcom",
+    "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
+    "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore",
+    "zstd": "/usr/local/bin/zstd",
+    "zstdcat": "/usr/local/bin/zstdcat",
+    "zstdgrep": "/usr/local/bin/zstdgrep",
+    "zstdless": "/usr/local/bin/zstdless",
+    "zstdmt": "/usr/local/bin/zstdmt",
+    "env-execute": "/usr/local/env-execute"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/r/r-linxreport:1.0.0--r43hdfd78af_0.json b/quay.io/biocontainers/r/r-linxreport:1.0.0--r43hdfd78af_0.json
new file mode 100644
index 0000000..4302aa3
--- /dev/null
+++ b/quay.io/biocontainers/r/r-linxreport:1.0.0--r43hdfd78af_0.json
@@ -0,0 +1,237 @@
+{
+    "R": "/usr/local/bin/R",
+    "Rscript": "/usr/local/bin/Rscript",
+    "adig": "/usr/local/bin/adig",
+    "ahost": "/usr/local/bin/ahost",
+    "autopoint": "/usr/local/bin/autopoint",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "cairo-trace": "/usr/local/bin/cairo-trace",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "cjpeg": "/usr/local/bin/cjpeg",
+    "clear": "/usr/local/bin/clear",
+    "compile_et": "/usr/local/bin/compile_et",
+    "curl": "/usr/local/bin/curl",
+    "curl-config": "/usr/local/bin/curl-config",
+    "derb": "/usr/local/bin/derb",
+    "djpeg": "/usr/local/bin/djpeg",
+    "envsubst": "/usr/local/bin/envsubst",
+    "fc-cache": "/usr/local/bin/fc-cache",
+    "fc-cat": "/usr/local/bin/fc-cat",
+    "fc-conflist": "/usr/local/bin/fc-conflist",
+    "fc-list": "/usr/local/bin/fc-list",
+    "fc-match": "/usr/local/bin/fc-match",
+    "fc-pattern": "/usr/local/bin/fc-pattern",
+    "fc-query": "/usr/local/bin/fc-query",
+    "fc-scan": "/usr/local/bin/fc-scan",
+    "fc-validate": "/usr/local/bin/fc-validate",
+    "freetype-config": "/usr/local/bin/freetype-config",
+    "fribidi": "/usr/local/bin/fribidi",
+    "genbrk": "/usr/local/bin/genbrk",
+    "gencfu": "/usr/local/bin/gencfu",
+    "gencnval": "/usr/local/bin/gencnval",
+    "gendict": "/usr/local/bin/gendict",
+    "genrb": "/usr/local/bin/genrb",
+    "gettext": "/usr/local/bin/gettext",
+    "gettext.sh": "/usr/local/bin/gettext.sh",
+    "gettextize": "/usr/local/bin/gettextize",
+    "gss-client": "/usr/local/bin/gss-client",
+    "hb-info": "/usr/local/bin/hb-info",
+    "hb-ot-shape-closure": "/usr/local/bin/hb-ot-shape-closure",
+    "hb-shape": "/usr/local/bin/hb-shape",
+    "hb-subset": "/usr/local/bin/hb-subset",
+    "hb-view": "/usr/local/bin/hb-view",
+    "icu-config": "/usr/local/bin/icu-config",
+    "icuexportdata": "/usr/local/bin/icuexportdata",
+    "icuinfo": "/usr/local/bin/icuinfo",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "jpegtran": "/usr/local/bin/jpegtran",
+    "k5srvutil": "/usr/local/bin/k5srvutil",
+    "kadmin": "/usr/local/bin/kadmin",
+    "kdestroy": "/usr/local/bin/kdestroy",
+    "keyctl": "/usr/local/bin/keyctl",
+    "kinit": "/usr/local/bin/kinit",
+    "klist": "/usr/local/bin/klist",
+    "kpasswd": "/usr/local/bin/kpasswd",
+    "krb5-config": "/usr/local/bin/krb5-config",
+    "ksu": "/usr/local/bin/ksu",
+    "kswitch": "/usr/local/bin/kswitch",
+    "ktutil": "/usr/local/bin/ktutil",
+    "kvno": "/usr/local/bin/kvno",
+    "libdeflate-gunzip": "/usr/local/bin/libdeflate-gunzip",
+    "libdeflate-gzip": "/usr/local/bin/libdeflate-gzip",
+    "libpng-config": "/usr/local/bin/libpng-config",
+    "libpng16-config": "/usr/local/bin/libpng16-config",
+    "linxreport.R": "/usr/local/bin/linxreport.R",
+    "lzcat": "/usr/local/bin/lzcat",
+    "lzcmp": "/usr/local/bin/lzcmp",
+    "lzdiff": "/usr/local/bin/lzdiff",
+    "lzegrep": "/usr/local/bin/lzegrep",
+    "lzfgrep": "/usr/local/bin/lzfgrep",
+    "lzgrep": "/usr/local/bin/lzgrep",
+    "lzless": "/usr/local/bin/lzless",
+    "lzma": "/usr/local/bin/lzma",
+    "lzmadec": "/usr/local/bin/lzmadec",
+    "lzmainfo": "/usr/local/bin/lzmainfo",
+    "lzmore": "/usr/local/bin/lzmore",
+    "make": "/usr/local/bin/make",
+    "makeconv": "/usr/local/bin/makeconv",
+    "msgattrib": "/usr/local/bin/msgattrib",
+    "msgcat": "/usr/local/bin/msgcat",
+    "msgcmp": "/usr/local/bin/msgcmp",
+    "msgcomm": "/usr/local/bin/msgcomm",
+    "msgconv": "/usr/local/bin/msgconv",
+    "msgen": "/usr/local/bin/msgen",
+    "msgexec": "/usr/local/bin/msgexec",
+    "msgfilter": "/usr/local/bin/msgfilter",
+    "msgfmt": "/usr/local/bin/msgfmt",
+    "msggrep": "/usr/local/bin/msggrep",
+    "msginit": "/usr/local/bin/msginit",
+    "msgmerge": "/usr/local/bin/msgmerge",
+    "msgunfmt": "/usr/local/bin/msgunfmt",
+    "msguniq": "/usr/local/bin/msguniq",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "ngettext": "/usr/local/bin/ngettext",
+    "nghttp": "/usr/local/bin/nghttp",
+    "nghttpd": "/usr/local/bin/nghttpd",
+    "nghttpx": "/usr/local/bin/nghttpx",
+    "openssl": "/usr/local/bin/openssl",
+    "pandoc": "/usr/local/bin/pandoc",
+    "pango-list": "/usr/local/bin/pango-list",
+    "pango-segmentation": "/usr/local/bin/pango-segmentation",
+    "pango-view": "/usr/local/bin/pango-view",
+    "pcre2-config": "/usr/local/bin/pcre2-config",
+    "pcre2_jit_test": "/usr/local/bin/pcre2_jit_test",
+    "pcre2grep": "/usr/local/bin/pcre2grep",
+    "pcre2posix_test": "/usr/local/bin/pcre2posix_test",
+    "pcre2test": "/usr/local/bin/pcre2test",
+    "pkgdata": "/usr/local/bin/pkgdata",
+    "png-fix-itxt": "/usr/local/bin/png-fix-itxt",
+    "pngfix": "/usr/local/bin/pngfix",
+    "rdjpgcom": "/usr/local/bin/rdjpgcom",
+    "recode-sr-latin": "/usr/local/bin/recode-sr-latin",
+    "reset": "/usr/local/bin/reset",
+    "sclient": "/usr/local/bin/sclient",
+    "sed": "/usr/local/bin/sed",
+    "sim_client": "/usr/local/bin/sim_client",
+    "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
+    "tabs": "/usr/local/bin/tabs",
+    "tclsh": "/usr/local/bin/tclsh",
+    "tclsh8.6": "/usr/local/bin/tclsh8.6",
+    "tic": "/usr/local/bin/tic",
+    "tiffcp": "/usr/local/bin/tiffcp",
+    "tiffdump": "/usr/local/bin/tiffdump",
+    "tiffinfo": "/usr/local/bin/tiffinfo",
+    "tiffset": "/usr/local/bin/tiffset",
+    "tiffsplit": "/usr/local/bin/tiffsplit",
+    "tjbench": "/usr/local/bin/tjbench",
+    "toe": "/usr/local/bin/toe",
+    "tput": "/usr/local/bin/tput",
+    "tset": "/usr/local/bin/tset",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unxz": "/usr/local/bin/unxz",
+    "unzstd": "/usr/local/bin/unzstd",
+    "uuclient": "/usr/local/bin/uuclient",
+    "wish": "/usr/local/bin/wish",
+    "wish8.6": "/usr/local/bin/wish8.6",
+    "wrjpgcom": "/usr/local/bin/wrjpgcom",
+    "x86_64-conda-linux-gnu-addr2line": "/usr/local/bin/x86_64-conda-linux-gnu-addr2line",
+    "x86_64-conda-linux-gnu-ar": "/usr/local/bin/x86_64-conda-linux-gnu-ar",
+    "x86_64-conda-linux-gnu-as": "/usr/local/bin/x86_64-conda-linux-gnu-as",
+    "x86_64-conda-linux-gnu-c++": "/usr/local/bin/x86_64-conda-linux-gnu-c++",
+    "x86_64-conda-linux-gnu-c++filt": "/usr/local/bin/x86_64-conda-linux-gnu-c++filt",
+    "x86_64-conda-linux-gnu-c89": "/usr/local/bin/x86_64-conda-linux-gnu-c89",
+    "x86_64-conda-linux-gnu-c99": "/usr/local/bin/x86_64-conda-linux-gnu-c99",
+    "x86_64-conda-linux-gnu-cc": "/usr/local/bin/x86_64-conda-linux-gnu-cc",
+    "x86_64-conda-linux-gnu-cpp": "/usr/local/bin/x86_64-conda-linux-gnu-cpp",
+    "x86_64-conda-linux-gnu-dwp": "/usr/local/bin/x86_64-conda-linux-gnu-dwp",
+    "x86_64-conda-linux-gnu-elfedit": "/usr/local/bin/x86_64-conda-linux-gnu-elfedit",
+    "x86_64-conda-linux-gnu-f95": "/usr/local/bin/x86_64-conda-linux-gnu-f95",
+    "x86_64-conda-linux-gnu-g++": "/usr/local/bin/x86_64-conda-linux-gnu-g++",
+    "x86_64-conda-linux-gnu-gcc": "/usr/local/bin/x86_64-conda-linux-gnu-gcc",
+    "x86_64-conda-linux-gnu-gcc-ar": "/usr/local/bin/x86_64-conda-linux-gnu-gcc-ar",
+    "x86_64-conda-linux-gnu-gcc-nm": "/usr/local/bin/x86_64-conda-linux-gnu-gcc-nm",
+    "x86_64-conda-linux-gnu-gcc-ranlib": "/usr/local/bin/x86_64-conda-linux-gnu-gcc-ranlib",
+    "x86_64-conda-linux-gnu-gcov": "/usr/local/bin/x86_64-conda-linux-gnu-gcov",
+    "x86_64-conda-linux-gnu-gcov-dump": "/usr/local/bin/x86_64-conda-linux-gnu-gcov-dump",
+    "x86_64-conda-linux-gnu-gcov-tool": "/usr/local/bin/x86_64-conda-linux-gnu-gcov-tool",
+    "x86_64-conda-linux-gnu-gfortran": "/usr/local/bin/x86_64-conda-linux-gnu-gfortran",
+    "x86_64-conda-linux-gnu-gprof": "/usr/local/bin/x86_64-conda-linux-gnu-gprof",
+    "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
+    "x86_64-conda-linux-gnu-ld.bfd": "/usr/local/bin/x86_64-conda-linux-gnu-ld.bfd",
+    "x86_64-conda-linux-gnu-ld.gold": "/usr/local/bin/x86_64-conda-linux-gnu-ld.gold",
+    "x86_64-conda-linux-gnu-nm": "/usr/local/bin/x86_64-conda-linux-gnu-nm",
+    "x86_64-conda-linux-gnu-objcopy": "/usr/local/bin/x86_64-conda-linux-gnu-objcopy",
+    "x86_64-conda-linux-gnu-objdump": "/usr/local/bin/x86_64-conda-linux-gnu-objdump",
+    "x86_64-conda-linux-gnu-ranlib": "/usr/local/bin/x86_64-conda-linux-gnu-ranlib",
+    "x86_64-conda-linux-gnu-readelf": "/usr/local/bin/x86_64-conda-linux-gnu-readelf",
+    "x86_64-conda-linux-gnu-size": "/usr/local/bin/x86_64-conda-linux-gnu-size",
+    "x86_64-conda-linux-gnu-strings": "/usr/local/bin/x86_64-conda-linux-gnu-strings",
+    "x86_64-conda-linux-gnu-strip": "/usr/local/bin/x86_64-conda-linux-gnu-strip",
+    "x86_64-conda_cos6-linux-gnu-addr2line": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-addr2line",
+    "x86_64-conda_cos6-linux-gnu-ar": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ar",
+    "x86_64-conda_cos6-linux-gnu-as": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-as",
+    "x86_64-conda_cos6-linux-gnu-c++": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c++",
+    "x86_64-conda_cos6-linux-gnu-c++filt": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c++filt",
+    "x86_64-conda_cos6-linux-gnu-c89": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c89",
+    "x86_64-conda_cos6-linux-gnu-c99": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c99",
+    "x86_64-conda_cos6-linux-gnu-cc": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-cc",
+    "x86_64-conda_cos6-linux-gnu-cpp": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-cpp",
+    "x86_64-conda_cos6-linux-gnu-dwp": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-dwp",
+    "x86_64-conda_cos6-linux-gnu-elfedit": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-elfedit",
+    "x86_64-conda_cos6-linux-gnu-f95": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-f95",
+    "x86_64-conda_cos6-linux-gnu-g++": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-g++",
+    "x86_64-conda_cos6-linux-gnu-gcc": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc",
+    "x86_64-conda_cos6-linux-gnu-gcc-ar": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc-ar",
+    "x86_64-conda_cos6-linux-gnu-gcc-nm": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc-nm",
+    "x86_64-conda_cos6-linux-gnu-gcc-ranlib": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc-ranlib",
+    "x86_64-conda_cos6-linux-gnu-gcov": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcov",
+    "x86_64-conda_cos6-linux-gnu-gcov-dump": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcov-dump",
+    "x86_64-conda_cos6-linux-gnu-gcov-tool": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcov-tool",
+    "x86_64-conda_cos6-linux-gnu-gfortran": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gfortran",
+    "x86_64-conda_cos6-linux-gnu-gprof": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gprof",
+    "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
+    "x86_64-conda_cos6-linux-gnu-ld.bfd": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld.bfd",
+    "x86_64-conda_cos6-linux-gnu-ld.gold": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld.gold",
+    "x86_64-conda_cos6-linux-gnu-nm": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-nm",
+    "x86_64-conda_cos6-linux-gnu-objcopy": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-objcopy",
+    "x86_64-conda_cos6-linux-gnu-objdump": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-objdump",
+    "x86_64-conda_cos6-linux-gnu-ranlib": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ranlib",
+    "x86_64-conda_cos6-linux-gnu-readelf": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-readelf",
+    "x86_64-conda_cos6-linux-gnu-size": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-size",
+    "x86_64-conda_cos6-linux-gnu-strings": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-strings",
+    "x86_64-conda_cos6-linux-gnu-strip": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-strip",
+    "xgettext": "/usr/local/bin/xgettext",
+    "xml2-config": "/usr/local/bin/xml2-config",
+    "xmlcatalog": "/usr/local/bin/xmlcatalog",
+    "xmllint": "/usr/local/bin/xmllint",
+    "xmlwf": "/usr/local/bin/xmlwf",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore",
+    "zstd": "/usr/local/bin/zstd",
+    "zstdcat": "/usr/local/bin/zstdcat",
+    "zstdgrep": "/usr/local/bin/zstdgrep",
+    "zstdless": "/usr/local/bin/zstdless",
+    "zstdmt": "/usr/local/bin/zstdmt",
+    "env-execute": "/usr/local/env-execute"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/r/r-scevan:1.0.1--r43hdfd78af_0.json b/quay.io/biocontainers/r/r-scevan:1.0.1--r43hdfd78af_0.json
new file mode 100644
index 0000000..087059c
--- /dev/null
+++ b/quay.io/biocontainers/r/r-scevan:1.0.1--r43hdfd78af_0.json
@@ -0,0 +1,263 @@
+{
+    "2to3": "/usr/local/bin/2to3",
+    "2to3-3.12": "/usr/local/bin/2to3-3.12",
+    "R": "/usr/local/bin/R",
+    "Rscript": "/usr/local/bin/Rscript",
+    "activate-global-python-argcomplete": "/usr/local/bin/activate-global-python-argcomplete",
+    "adig": "/usr/local/bin/adig",
+    "ahost": "/usr/local/bin/ahost",
+    "autopoint": "/usr/local/bin/autopoint",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "cairo-trace": "/usr/local/bin/cairo-trace",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "cjpeg": "/usr/local/bin/cjpeg",
+    "clear": "/usr/local/bin/clear",
+    "compile_et": "/usr/local/bin/compile_et",
+    "curl": "/usr/local/bin/curl",
+    "curl-config": "/usr/local/bin/curl-config",
+    "derb": "/usr/local/bin/derb",
+    "djpeg": "/usr/local/bin/djpeg",
+    "envsubst": "/usr/local/bin/envsubst",
+    "fc-cache": "/usr/local/bin/fc-cache",
+    "fc-cat": "/usr/local/bin/fc-cat",
+    "fc-conflist": "/usr/local/bin/fc-conflist",
+    "fc-list": "/usr/local/bin/fc-list",
+    "fc-match": "/usr/local/bin/fc-match",
+    "fc-pattern": "/usr/local/bin/fc-pattern",
+    "fc-query": "/usr/local/bin/fc-query",
+    "fc-scan": "/usr/local/bin/fc-scan",
+    "fc-validate": "/usr/local/bin/fc-validate",
+    "freetype-config": "/usr/local/bin/freetype-config",
+    "fribidi": "/usr/local/bin/fribidi",
+    "genbrk": "/usr/local/bin/genbrk",
+    "gencfu": "/usr/local/bin/gencfu",
+    "gencnval": "/usr/local/bin/gencnval",
+    "gendict": "/usr/local/bin/gendict",
+    "genrb": "/usr/local/bin/genrb",
+    "gettext": "/usr/local/bin/gettext",
+    "gettext.sh": "/usr/local/bin/gettext.sh",
+    "gettextize": "/usr/local/bin/gettextize",
+    "git2": "/usr/local/bin/git2",
+    "glpsol": "/usr/local/bin/glpsol",
+    "gss-client": "/usr/local/bin/gss-client",
+    "hb-info": "/usr/local/bin/hb-info",
+    "hb-ot-shape-closure": "/usr/local/bin/hb-ot-shape-closure",
+    "hb-shape": "/usr/local/bin/hb-shape",
+    "hb-subset": "/usr/local/bin/hb-subset",
+    "hb-view": "/usr/local/bin/hb-view",
+    "icu-config": "/usr/local/bin/icu-config",
+    "icuexportdata": "/usr/local/bin/icuexportdata",
+    "icuinfo": "/usr/local/bin/icuinfo",
+    "idle3": "/usr/local/bin/idle3",
+    "idle3.12": "/usr/local/bin/idle3.12",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "installBiocDataPackage.sh": "/usr/local/bin/installBiocDataPackage.sh",
+    "jpegtran": "/usr/local/bin/jpegtran",
+    "jq": "/usr/local/bin/jq",
+    "k5srvutil": "/usr/local/bin/k5srvutil",
+    "kadmin": "/usr/local/bin/kadmin",
+    "kdestroy": "/usr/local/bin/kdestroy",
+    "keyctl": "/usr/local/bin/keyctl",
+    "kinit": "/usr/local/bin/kinit",
+    "klist": "/usr/local/bin/klist",
+    "kpasswd": "/usr/local/bin/kpasswd",
+    "krb5-config": "/usr/local/bin/krb5-config",
+    "ksu": "/usr/local/bin/ksu",
+    "kswitch": "/usr/local/bin/kswitch",
+    "ktutil": "/usr/local/bin/ktutil",
+    "kvno": "/usr/local/bin/kvno",
+    "libdeflate-gunzip": "/usr/local/bin/libdeflate-gunzip",
+    "libdeflate-gzip": "/usr/local/bin/libdeflate-gzip",
+    "libpng-config": "/usr/local/bin/libpng-config",
+    "libpng16-config": "/usr/local/bin/libpng16-config",
+    "lzcat": "/usr/local/bin/lzcat",
+    "lzcmp": "/usr/local/bin/lzcmp",
+    "lzdiff": "/usr/local/bin/lzdiff",
+    "lzegrep": "/usr/local/bin/lzegrep",
+    "lzfgrep": "/usr/local/bin/lzfgrep",
+    "lzgrep": "/usr/local/bin/lzgrep",
+    "lzless": "/usr/local/bin/lzless",
+    "lzma": "/usr/local/bin/lzma",
+    "lzmadec": "/usr/local/bin/lzmadec",
+    "lzmainfo": "/usr/local/bin/lzmainfo",
+    "lzmore": "/usr/local/bin/lzmore",
+    "make": "/usr/local/bin/make",
+    "makeconv": "/usr/local/bin/makeconv",
+    "msgattrib": "/usr/local/bin/msgattrib",
+    "msgcat": "/usr/local/bin/msgcat",
+    "msgcmp": "/usr/local/bin/msgcmp",
+    "msgcomm": "/usr/local/bin/msgcomm",
+    "msgconv": "/usr/local/bin/msgconv",
+    "msgen": "/usr/local/bin/msgen",
+    "msgexec": "/usr/local/bin/msgexec",
+    "msgfilter": "/usr/local/bin/msgfilter",
+    "msgfmt": "/usr/local/bin/msgfmt",
+    "msggrep": "/usr/local/bin/msggrep",
+    "msginit": "/usr/local/bin/msginit",
+    "msgmerge": "/usr/local/bin/msgmerge",
+    "msgunfmt": "/usr/local/bin/msgunfmt",
+    "msguniq": "/usr/local/bin/msguniq",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "ngettext": "/usr/local/bin/ngettext",
+    "nghttp": "/usr/local/bin/nghttp",
+    "nghttpd": "/usr/local/bin/nghttpd",
+    "nghttpx": "/usr/local/bin/nghttpx",
+    "onig-config": "/usr/local/bin/onig-config",
+    "openssl": "/usr/local/bin/openssl",
+    "pandoc": "/usr/local/bin/pandoc",
+    "pango-list": "/usr/local/bin/pango-list",
+    "pango-segmentation": "/usr/local/bin/pango-segmentation",
+    "pango-view": "/usr/local/bin/pango-view",
+    "pcre2-config": "/usr/local/bin/pcre2-config",
+    "pcre2_jit_test": "/usr/local/bin/pcre2_jit_test",
+    "pcre2grep": "/usr/local/bin/pcre2grep",
+    "pcre2posix_test": "/usr/local/bin/pcre2posix_test",
+    "pcre2test": "/usr/local/bin/pcre2test",
+    "pip": "/usr/local/bin/pip",
+    "pip3": "/usr/local/bin/pip3",
+    "pkgdata": "/usr/local/bin/pkgdata",
+    "png-fix-itxt": "/usr/local/bin/png-fix-itxt",
+    "pngfix": "/usr/local/bin/pngfix",
+    "pydoc": "/usr/local/bin/pydoc",
+    "pydoc3": "/usr/local/bin/pydoc3",
+    "pydoc3.12": "/usr/local/bin/pydoc3.12",
+    "python": "/usr/local/bin/python",
+    "python-argcomplete-check-easy-install-script": "/usr/local/bin/python-argcomplete-check-easy-install-script",
+    "python3": "/usr/local/bin/python3",
+    "python3-config": "/usr/local/bin/python3-config",
+    "python3.1": "/usr/local/bin/python3.1",
+    "python3.12": "/usr/local/bin/python3.12",
+    "python3.12-config": "/usr/local/bin/python3.12-config",
+    "rdjpgcom": "/usr/local/bin/rdjpgcom",
+    "recode-sr-latin": "/usr/local/bin/recode-sr-latin",
+    "register-python-argcomplete": "/usr/local/bin/register-python-argcomplete",
+    "reset": "/usr/local/bin/reset",
+    "sclient": "/usr/local/bin/sclient",
+    "sed": "/usr/local/bin/sed",
+    "sim_client": "/usr/local/bin/sim_client",
+    "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
+    "tabs": "/usr/local/bin/tabs",
+    "tclsh": "/usr/local/bin/tclsh",
+    "tclsh8.6": "/usr/local/bin/tclsh8.6",
+    "tic": "/usr/local/bin/tic",
+    "tiffcp": "/usr/local/bin/tiffcp",
+    "tiffdump": "/usr/local/bin/tiffdump",
+    "tiffinfo": "/usr/local/bin/tiffinfo",
+    "tiffset": "/usr/local/bin/tiffset",
+    "tiffsplit": "/usr/local/bin/tiffsplit",
+    "tjbench": "/usr/local/bin/tjbench",
+    "toe": "/usr/local/bin/toe",
+    "tomlq": "/usr/local/bin/tomlq",
+    "tput": "/usr/local/bin/tput",
+    "tset": "/usr/local/bin/tset",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unxz": "/usr/local/bin/unxz",
+    "unzstd": "/usr/local/bin/unzstd",
+    "uuclient": "/usr/local/bin/uuclient",
+    "wheel": "/usr/local/bin/wheel",
+    "wish": "/usr/local/bin/wish",
+    "wish8.6": "/usr/local/bin/wish8.6",
+    "wrjpgcom": "/usr/local/bin/wrjpgcom",
+    "x86_64-conda-linux-gnu-addr2line": "/usr/local/bin/x86_64-conda-linux-gnu-addr2line",
+    "x86_64-conda-linux-gnu-ar": "/usr/local/bin/x86_64-conda-linux-gnu-ar",
+    "x86_64-conda-linux-gnu-as": "/usr/local/bin/x86_64-conda-linux-gnu-as",
+    "x86_64-conda-linux-gnu-c++": "/usr/local/bin/x86_64-conda-linux-gnu-c++",
+    "x86_64-conda-linux-gnu-c++filt": "/usr/local/bin/x86_64-conda-linux-gnu-c++filt",
+    "x86_64-conda-linux-gnu-c89": "/usr/local/bin/x86_64-conda-linux-gnu-c89",
+    "x86_64-conda-linux-gnu-c99": "/usr/local/bin/x86_64-conda-linux-gnu-c99",
+    "x86_64-conda-linux-gnu-cc": "/usr/local/bin/x86_64-conda-linux-gnu-cc",
+    "x86_64-conda-linux-gnu-cpp": "/usr/local/bin/x86_64-conda-linux-gnu-cpp",
+    "x86_64-conda-linux-gnu-dwp": "/usr/local/bin/x86_64-conda-linux-gnu-dwp",
+    "x86_64-conda-linux-gnu-elfedit": "/usr/local/bin/x86_64-conda-linux-gnu-elfedit",
+    "x86_64-conda-linux-gnu-f95": "/usr/local/bin/x86_64-conda-linux-gnu-f95",
+    "x86_64-conda-linux-gnu-g++": "/usr/local/bin/x86_64-conda-linux-gnu-g++",
+    "x86_64-conda-linux-gnu-gcc": "/usr/local/bin/x86_64-conda-linux-gnu-gcc",
+    "x86_64-conda-linux-gnu-gcc-ar": "/usr/local/bin/x86_64-conda-linux-gnu-gcc-ar",
+    "x86_64-conda-linux-gnu-gcc-nm": "/usr/local/bin/x86_64-conda-linux-gnu-gcc-nm",
+    "x86_64-conda-linux-gnu-gcc-ranlib": "/usr/local/bin/x86_64-conda-linux-gnu-gcc-ranlib",
+    "x86_64-conda-linux-gnu-gcov": "/usr/local/bin/x86_64-conda-linux-gnu-gcov",
+    "x86_64-conda-linux-gnu-gcov-dump": "/usr/local/bin/x86_64-conda-linux-gnu-gcov-dump",
+    "x86_64-conda-linux-gnu-gcov-tool": "/usr/local/bin/x86_64-conda-linux-gnu-gcov-tool",
+    "x86_64-conda-linux-gnu-gfortran": "/usr/local/bin/x86_64-conda-linux-gnu-gfortran",
+    "x86_64-conda-linux-gnu-gprof": "/usr/local/bin/x86_64-conda-linux-gnu-gprof",
+    "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
+    "x86_64-conda-linux-gnu-ld.bfd": "/usr/local/bin/x86_64-conda-linux-gnu-ld.bfd",
+    "x86_64-conda-linux-gnu-ld.gold": "/usr/local/bin/x86_64-conda-linux-gnu-ld.gold",
+    "x86_64-conda-linux-gnu-nm": "/usr/local/bin/x86_64-conda-linux-gnu-nm",
+    "x86_64-conda-linux-gnu-objcopy": "/usr/local/bin/x86_64-conda-linux-gnu-objcopy",
+    "x86_64-conda-linux-gnu-objdump": "/usr/local/bin/x86_64-conda-linux-gnu-objdump",
+    "x86_64-conda-linux-gnu-ranlib": "/usr/local/bin/x86_64-conda-linux-gnu-ranlib",
+    "x86_64-conda-linux-gnu-readelf": "/usr/local/bin/x86_64-conda-linux-gnu-readelf",
+    "x86_64-conda-linux-gnu-size": "/usr/local/bin/x86_64-conda-linux-gnu-size",
+    "x86_64-conda-linux-gnu-strings": "/usr/local/bin/x86_64-conda-linux-gnu-strings",
+    "x86_64-conda-linux-gnu-strip": "/usr/local/bin/x86_64-conda-linux-gnu-strip",
+    "x86_64-conda_cos6-linux-gnu-addr2line": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-addr2line",
+    "x86_64-conda_cos6-linux-gnu-ar": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ar",
+    "x86_64-conda_cos6-linux-gnu-as": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-as",
+    "x86_64-conda_cos6-linux-gnu-c++": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c++",
+    "x86_64-conda_cos6-linux-gnu-c++filt": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c++filt",
+    "x86_64-conda_cos6-linux-gnu-c89": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c89",
+    "x86_64-conda_cos6-linux-gnu-c99": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c99",
+    "x86_64-conda_cos6-linux-gnu-cc": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-cc",
+    "x86_64-conda_cos6-linux-gnu-cpp": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-cpp",
+    "x86_64-conda_cos6-linux-gnu-dwp": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-dwp",
+    "x86_64-conda_cos6-linux-gnu-elfedit": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-elfedit",
+    "x86_64-conda_cos6-linux-gnu-f95": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-f95",
+    "x86_64-conda_cos6-linux-gnu-g++": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-g++",
+    "x86_64-conda_cos6-linux-gnu-gcc": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc",
+    "x86_64-conda_cos6-linux-gnu-gcc-ar": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc-ar",
+    "x86_64-conda_cos6-linux-gnu-gcc-nm": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc-nm",
+    "x86_64-conda_cos6-linux-gnu-gcc-ranlib": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc-ranlib",
+    "x86_64-conda_cos6-linux-gnu-gcov": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcov",
+    "x86_64-conda_cos6-linux-gnu-gcov-dump": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcov-dump",
+    "x86_64-conda_cos6-linux-gnu-gcov-tool": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcov-tool",
+    "x86_64-conda_cos6-linux-gnu-gfortran": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gfortran",
+    "x86_64-conda_cos6-linux-gnu-gprof": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gprof",
+    "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
+    "x86_64-conda_cos6-linux-gnu-ld.bfd": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld.bfd",
+    "x86_64-conda_cos6-linux-gnu-ld.gold": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld.gold",
+    "x86_64-conda_cos6-linux-gnu-nm": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-nm",
+    "x86_64-conda_cos6-linux-gnu-objcopy": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-objcopy",
+    "x86_64-conda_cos6-linux-gnu-objdump": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-objdump",
+    "x86_64-conda_cos6-linux-gnu-ranlib": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ranlib",
+    "x86_64-conda_cos6-linux-gnu-readelf": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-readelf",
+    "x86_64-conda_cos6-linux-gnu-size": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-size",
+    "x86_64-conda_cos6-linux-gnu-strings": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-strings",
+    "x86_64-conda_cos6-linux-gnu-strip": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-strip",
+    "xgettext": "/usr/local/bin/xgettext",
+    "xml2-config": "/usr/local/bin/xml2-config",
+    "xmlcatalog": "/usr/local/bin/xmlcatalog",
+    "xmllint": "/usr/local/bin/xmllint",
+    "xmlwf": "/usr/local/bin/xmlwf",
+    "xq": "/usr/local/bin/xq",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore",
+    "yq": "/usr/local/bin/yq",
+    "zstd": "/usr/local/bin/zstd",
+    "zstdcat": "/usr/local/bin/zstdcat",
+    "zstdgrep": "/usr/local/bin/zstdgrep",
+    "zstdless": "/usr/local/bin/zstdless",
+    "zstdmt": "/usr/local/bin/zstdmt",
+    "env-execute": "/usr/local/env-execute"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/s/seqnado:0.4.1--pyhdfd78af_0.json b/quay.io/biocontainers/s/seqnado:0.4.1--pyhdfd78af_0.json
new file mode 100644
index 0000000..157b1f0
--- /dev/null
+++ b/quay.io/biocontainers/s/seqnado:0.4.1--pyhdfd78af_0.json
@@ -0,0 +1,217 @@
+{
+    "2to3": "/usr/local/bin/2to3",
+    "2to3-3.10": "/usr/local/bin/2to3-3.10",
+    "adig": "/usr/local/bin/adig",
+    "ahost": "/usr/local/bin/ahost",
+    "autopoint": "/usr/local/bin/autopoint",
+    "brotli": "/usr/local/bin/brotli",
+    "bsdcat": "/usr/local/bin/bsdcat",
+    "bsdcpio": "/usr/local/bin/bsdcpio",
+    "bsdtar": "/usr/local/bin/bsdtar",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "cbc": "/usr/local/bin/cbc",
+    "chardetect": "/usr/local/bin/chardetect",
+    "cjpeg": "/usr/local/bin/cjpeg",
+    "clear": "/usr/local/bin/clear",
+    "clp": "/usr/local/bin/clp",
+    "cnitool": "/usr/local/bin/cnitool",
+    "cookiecutter": "/usr/local/bin/cookiecutter",
+    "derb": "/usr/local/bin/derb",
+    "djpeg": "/usr/local/bin/djpeg",
+    "docutils": "/usr/local/bin/docutils",
+    "envsubst": "/usr/local/bin/envsubst",
+    "f2py": "/usr/local/bin/f2py",
+    "fonttools": "/usr/local/bin/fonttools",
+    "freetype-config": "/usr/local/bin/freetype-config",
+    "genbrk": "/usr/local/bin/genbrk",
+    "gencfu": "/usr/local/bin/gencfu",
+    "gencnval": "/usr/local/bin/gencnval",
+    "gendict": "/usr/local/bin/gendict",
+    "genrb": "/usr/local/bin/genrb",
+    "gettext": "/usr/local/bin/gettext",
+    "gettext.sh": "/usr/local/bin/gettext.sh",
+    "gettextize": "/usr/local/bin/gettextize",
+    "icu-config": "/usr/local/bin/icu-config",
+    "icuexportdata": "/usr/local/bin/icuexportdata",
+    "icuinfo": "/usr/local/bin/icuinfo",
+    "idle3": "/usr/local/bin/idle3",
+    "idle3.10": "/usr/local/bin/idle3.10",
+    "idn2": "/usr/local/bin/idn2",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "jp.py": "/usr/local/bin/jp.py",
+    "jpegtran": "/usr/local/bin/jpegtran",
+    "jpgicc": "/usr/local/bin/jpgicc",
+    "jq": "/usr/local/bin/jq",
+    "jsonschema": "/usr/local/bin/jsonschema",
+    "jupyter": "/usr/local/bin/jupyter",
+    "jupyter-migrate": "/usr/local/bin/jupyter-migrate",
+    "jupyter-troubleshoot": "/usr/local/bin/jupyter-troubleshoot",
+    "jupyter-trust": "/usr/local/bin/jupyter-trust",
+    "libdeflate-gunzip": "/usr/local/bin/libdeflate-gunzip",
+    "libdeflate-gzip": "/usr/local/bin/libdeflate-gzip",
+    "libpng-config": "/usr/local/bin/libpng-config",
+    "libpng16-config": "/usr/local/bin/libpng16-config",
+    "linkicc": "/usr/local/bin/linkicc",
+    "lz4": "/usr/local/bin/lz4",
+    "lz4c": "/usr/local/bin/lz4c",
+    "lz4cat": "/usr/local/bin/lz4cat",
+    "lzcat": "/usr/local/bin/lzcat",
+    "lzcmp": "/usr/local/bin/lzcmp",
+    "lzdiff": "/usr/local/bin/lzdiff",
+    "lzegrep": "/usr/local/bin/lzegrep",
+    "lzfgrep": "/usr/local/bin/lzfgrep",
+    "lzgrep": "/usr/local/bin/lzgrep",
+    "lzless": "/usr/local/bin/lzless",
+    "lzma": "/usr/local/bin/lzma",
+    "lzmadec": "/usr/local/bin/lzmadec",
+    "lzmainfo": "/usr/local/bin/lzmainfo",
+    "lzmore": "/usr/local/bin/lzmore",
+    "makeconv": "/usr/local/bin/makeconv",
+    "markdown-it": "/usr/local/bin/markdown-it",
+    "mksquashfs": "/usr/local/bin/mksquashfs",
+    "msgattrib": "/usr/local/bin/msgattrib",
+    "msgcat": "/usr/local/bin/msgcat",
+    "msgcmp": "/usr/local/bin/msgcmp",
+    "msgcomm": "/usr/local/bin/msgcomm",
+    "msgconv": "/usr/local/bin/msgconv",
+    "msgen": "/usr/local/bin/msgen",
+    "msgexec": "/usr/local/bin/msgexec",
+    "msgfilter": "/usr/local/bin/msgfilter",
+    "msgfmt": "/usr/local/bin/msgfmt",
+    "msggrep": "/usr/local/bin/msggrep",
+    "msginit": "/usr/local/bin/msginit",
+    "msgmerge": "/usr/local/bin/msgmerge",
+    "msgunfmt": "/usr/local/bin/msgunfmt",
+    "msguniq": "/usr/local/bin/msguniq",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "ngettext": "/usr/local/bin/ngettext",
+    "normalizer": "/usr/local/bin/normalizer",
+    "onig-config": "/usr/local/bin/onig-config",
+    "openssl": "/usr/local/bin/openssl",
+    "opj_compress": "/usr/local/bin/opj_compress",
+    "opj_decompress": "/usr/local/bin/opj_decompress",
+    "opj_dump": "/usr/local/bin/opj_dump",
+    "pip": "/usr/local/bin/pip",
+    "pip3": "/usr/local/bin/pip3",
+    "pkgdata": "/usr/local/bin/pkgdata",
+    "plac_runner.py": "/usr/local/bin/plac_runner.py",
+    "png-fix-itxt": "/usr/local/bin/png-fix-itxt",
+    "pngfix": "/usr/local/bin/pngfix",
+    "protoc": "/usr/local/bin/protoc",
+    "protoc-25.2.0": "/usr/local/bin/protoc-25.2.0",
+    "psicc": "/usr/local/bin/psicc",
+    "pulptest": "/usr/local/bin/pulptest",
+    "py.test": "/usr/local/bin/py.test",
+    "pydoc": "/usr/local/bin/pydoc",
+    "pydoc3": "/usr/local/bin/pydoc3",
+    "pydoc3.10": "/usr/local/bin/pydoc3.10",
+    "pyftmerge": "/usr/local/bin/pyftmerge",
+    "pyftsubset": "/usr/local/bin/pyftsubset",
+    "pygmentize": "/usr/local/bin/pygmentize",
+    "pyrsa-decrypt": "/usr/local/bin/pyrsa-decrypt",
+    "pyrsa-encrypt": "/usr/local/bin/pyrsa-encrypt",
+    "pyrsa-keygen": "/usr/local/bin/pyrsa-keygen",
+    "pyrsa-priv2pub": "/usr/local/bin/pyrsa-priv2pub",
+    "pyrsa-sign": "/usr/local/bin/pyrsa-sign",
+    "pyrsa-verify": "/usr/local/bin/pyrsa-verify",
+    "pytest": "/usr/local/bin/pytest",
+    "python": "/usr/local/bin/python",
+    "python3": "/usr/local/bin/python3",
+    "python3-config": "/usr/local/bin/python3-config",
+    "python3.1": "/usr/local/bin/python3.1",
+    "python3.10": "/usr/local/bin/python3.10",
+    "python3.10-config": "/usr/local/bin/python3.10-config",
+    "rdjpgcom": "/usr/local/bin/rdjpgcom",
+    "recode-sr-latin": "/usr/local/bin/recode-sr-latin",
+    "reset": "/usr/local/bin/reset",
+    "rst2html.py": "/usr/local/bin/rst2html.py",
+    "rst2html4.py": "/usr/local/bin/rst2html4.py",
+    "rst2html5.py": "/usr/local/bin/rst2html5.py",
+    "rst2latex.py": "/usr/local/bin/rst2latex.py",
+    "rst2man.py": "/usr/local/bin/rst2man.py",
+    "rst2odt.py": "/usr/local/bin/rst2odt.py",
+    "rst2odt_prepstyles.py": "/usr/local/bin/rst2odt_prepstyles.py",
+    "rst2pseudoxml.py": "/usr/local/bin/rst2pseudoxml.py",
+    "rst2s5.py": "/usr/local/bin/rst2s5.py",
+    "rst2xetex.py": "/usr/local/bin/rst2xetex.py",
+    "rst2xml.py": "/usr/local/bin/rst2xml.py",
+    "rstpep2html.py": "/usr/local/bin/rstpep2html.py",
+    "run-singularity": "/usr/local/bin/run-singularity",
+    "scmp_sys_resolver": "/usr/local/bin/scmp_sys_resolver",
+    "seqnado": "/usr/local/bin/seqnado",
+    "seqnado-config": "/usr/local/bin/seqnado-config",
+    "seqnado-design": "/usr/local/bin/seqnado-design",
+    "singularity": "/usr/local/bin/singularity",
+    "slugify": "/usr/local/bin/slugify",
+    "snakemake": "/usr/local/bin/snakemake",
+    "snakemake-bash-completion": "/usr/local/bin/snakemake-bash-completion",
+    "sqfscat": "/usr/local/bin/sqfscat",
+    "sqfstar": "/usr/local/bin/sqfstar",
+    "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
+    "stone": "/usr/local/bin/stone",
+    "tabs": "/usr/local/bin/tabs",
+    "tabulate": "/usr/local/bin/tabulate",
+    "tclsh": "/usr/local/bin/tclsh",
+    "tclsh8.6": "/usr/local/bin/tclsh8.6",
+    "tic": "/usr/local/bin/tic",
+    "tiffcp": "/usr/local/bin/tiffcp",
+    "tiffdump": "/usr/local/bin/tiffdump",
+    "tiffinfo": "/usr/local/bin/tiffinfo",
+    "tiffset": "/usr/local/bin/tiffset",
+    "tiffsplit": "/usr/local/bin/tiffsplit",
+    "tificc": "/usr/local/bin/tificc",
+    "tjbench": "/usr/local/bin/tjbench",
+    "toe": "/usr/local/bin/toe",
+    "tput": "/usr/local/bin/tput",
+    "tracknado": "/usr/local/bin/tracknado",
+    "transicc": "/usr/local/bin/transicc",
+    "tset": "/usr/local/bin/tset",
+    "ttx": "/usr/local/bin/ttx",
+    "unlz4": "/usr/local/bin/unlz4",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unsquashfs": "/usr/local/bin/unsquashfs",
+    "unxz": "/usr/local/bin/unxz",
+    "unzstd": "/usr/local/bin/unzstd",
+    "wget": "/usr/local/bin/wget",
+    "wheel": "/usr/local/bin/wheel",
+    "wish": "/usr/local/bin/wish",
+    "wish8.6": "/usr/local/bin/wish8.6",
+    "wrjpgcom": "/usr/local/bin/wrjpgcom",
+    "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
+    "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
+    "xgettext": "/usr/local/bin/xgettext",
+    "xml2-config": "/usr/local/bin/xml2-config",
+    "xmlcatalog": "/usr/local/bin/xmlcatalog",
+    "xmllint": "/usr/local/bin/xmllint",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore",
+    "yte": "/usr/local/bin/yte",
+    "zstd": "/usr/local/bin/zstd",
+    "zstdcat": "/usr/local/bin/zstdcat",
+    "zstdgrep": "/usr/local/bin/zstdgrep",
+    "zstdless": "/usr/local/bin/zstdless",
+    "zstdmt": "/usr/local/bin/zstdmt",
+    "env-execute": "/usr/local/env-execute"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/t/taxor:0.1.1--hc155240_0.json b/quay.io/biocontainers/t/taxor:0.1.1--hc155240_0.json
new file mode 100644
index 0000000..fd2165a
--- /dev/null
+++ b/quay.io/biocontainers/t/taxor:0.1.1--hc155240_0.json
@@ -0,0 +1,175 @@
+{
+    "adig": "/usr/local/bin/adig",
+    "ahost": "/usr/local/bin/ahost",
+    "b2sum": "/usr/local/bin/b2sum",
+    "base32": "/usr/local/bin/base32",
+    "base64": "/usr/local/bin/base64",
+    "basename": "/usr/local/bin/basename",
+    "basenc": "/usr/local/bin/basenc",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "cat": "/usr/local/bin/cat",
+    "chcon": "/usr/local/bin/chcon",
+    "chgrp": "/usr/local/bin/chgrp",
+    "chmod": "/usr/local/bin/chmod",
+    "chown": "/usr/local/bin/chown",
+    "chroot": "/usr/local/bin/chroot",
+    "cksum": "/usr/local/bin/cksum",
+    "clear": "/usr/local/bin/clear",
+    "cmp": "/usr/local/bin/cmp",
+    "comm": "/usr/local/bin/comm",
+    "compile_et": "/usr/local/bin/compile_et",
+    "cp": "/usr/local/bin/cp",
+    "csplit": "/usr/local/bin/csplit",
+    "curl": "/usr/local/bin/curl",
+    "curl-config": "/usr/local/bin/curl-config",
+    "cut": "/usr/local/bin/cut",
+    "date": "/usr/local/bin/date",
+    "dd": "/usr/local/bin/dd",
+    "df": "/usr/local/bin/df",
+    "diff": "/usr/local/bin/diff",
+    "diff3": "/usr/local/bin/diff3",
+    "dir": "/usr/local/bin/dir",
+    "dircolors": "/usr/local/bin/dircolors",
+    "dirname": "/usr/local/bin/dirname",
+    "du": "/usr/local/bin/du",
+    "echo": "/usr/local/bin/echo",
+    "egrep": "/usr/local/bin/egrep",
+    "env": "/usr/local/bin/env",
+    "expand": "/usr/local/bin/expand",
+    "expr": "/usr/local/bin/expr",
+    "factor": "/usr/local/bin/factor",
+    "false": "/usr/local/bin/false",
+    "fgrep": "/usr/local/bin/fgrep",
+    "fmt": "/usr/local/bin/fmt",
+    "fold": "/usr/local/bin/fold",
+    "grep": "/usr/local/bin/grep",
+    "groups": "/usr/local/bin/groups",
+    "gss-client": "/usr/local/bin/gss-client",
+    "head": "/usr/local/bin/head",
+    "hostid": "/usr/local/bin/hostid",
+    "id": "/usr/local/bin/id",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "install": "/usr/local/bin/install",
+    "join": "/usr/local/bin/join",
+    "k5srvutil": "/usr/local/bin/k5srvutil",
+    "kadmin": "/usr/local/bin/kadmin",
+    "kdestroy": "/usr/local/bin/kdestroy",
+    "keyctl": "/usr/local/bin/keyctl",
+    "kill": "/usr/local/bin/kill",
+    "kinit": "/usr/local/bin/kinit",
+    "klist": "/usr/local/bin/klist",
+    "kpasswd": "/usr/local/bin/kpasswd",
+    "krb5-config": "/usr/local/bin/krb5-config",
+    "ksu": "/usr/local/bin/ksu",
+    "kswitch": "/usr/local/bin/kswitch",
+    "ktutil": "/usr/local/bin/ktutil",
+    "kvno": "/usr/local/bin/kvno",
+    "link": "/usr/local/bin/link",
+    "ln": "/usr/local/bin/ln",
+    "logname": "/usr/local/bin/logname",
+    "ls": "/usr/local/bin/ls",
+    "md5sum": "/usr/local/bin/md5sum",
+    "mkdir": "/usr/local/bin/mkdir",
+    "mkfifo": "/usr/local/bin/mkfifo",
+    "mknod": "/usr/local/bin/mknod",
+    "mktemp": "/usr/local/bin/mktemp",
+    "mv": "/usr/local/bin/mv",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "nghttp": "/usr/local/bin/nghttp",
+    "nghttpd": "/usr/local/bin/nghttpd",
+    "nghttpx": "/usr/local/bin/nghttpx",
+    "nice": "/usr/local/bin/nice",
+    "nl": "/usr/local/bin/nl",
+    "nohup": "/usr/local/bin/nohup",
+    "nproc": "/usr/local/bin/nproc",
+    "numfmt": "/usr/local/bin/numfmt",
+    "od": "/usr/local/bin/od",
+    "openssl": "/usr/local/bin/openssl",
+    "paste": "/usr/local/bin/paste",
+    "pathchk": "/usr/local/bin/pathchk",
+    "pcre2-config": "/usr/local/bin/pcre2-config",
+    "pcre2_jit_test": "/usr/local/bin/pcre2_jit_test",
+    "pcre2grep": "/usr/local/bin/pcre2grep",
+    "pcre2test": "/usr/local/bin/pcre2test",
+    "pinky": "/usr/local/bin/pinky",
+    "pr": "/usr/local/bin/pr",
+    "printenv": "/usr/local/bin/printenv",
+    "printf": "/usr/local/bin/printf",
+    "ptx": "/usr/local/bin/ptx",
+    "pwd": "/usr/local/bin/pwd",
+    "readlink": "/usr/local/bin/readlink",
+    "realpath": "/usr/local/bin/realpath",
+    "reset": "/usr/local/bin/reset",
+    "rm": "/usr/local/bin/rm",
+    "rmdir": "/usr/local/bin/rmdir",
+    "runcon": "/usr/local/bin/runcon",
+    "sclient": "/usr/local/bin/sclient",
+    "sdiff": "/usr/local/bin/sdiff",
+    "seq": "/usr/local/bin/seq",
+    "sha1sum": "/usr/local/bin/sha1sum",
+    "sha224sum": "/usr/local/bin/sha224sum",
+    "sha256sum": "/usr/local/bin/sha256sum",
+    "sha384sum": "/usr/local/bin/sha384sum",
+    "sha512sum": "/usr/local/bin/sha512sum",
+    "shred": "/usr/local/bin/shred",
+    "shuf": "/usr/local/bin/shuf",
+    "sim_client": "/usr/local/bin/sim_client",
+    "sleep": "/usr/local/bin/sleep",
+    "sort": "/usr/local/bin/sort",
+    "split": "/usr/local/bin/split",
+    "stat": "/usr/local/bin/stat",
+    "stdbuf": "/usr/local/bin/stdbuf",
+    "stty": "/usr/local/bin/stty",
+    "sum": "/usr/local/bin/sum",
+    "sync": "/usr/local/bin/sync",
+    "tabs": "/usr/local/bin/tabs",
+    "tac": "/usr/local/bin/tac",
+    "tail": "/usr/local/bin/tail",
+    "taxor": "/usr/local/bin/taxor",
+    "tee": "/usr/local/bin/tee",
+    "test": "/usr/local/bin/test",
+    "tic": "/usr/local/bin/tic",
+    "timeout": "/usr/local/bin/timeout",
+    "toe": "/usr/local/bin/toe",
+    "touch": "/usr/local/bin/touch",
+    "tput": "/usr/local/bin/tput",
+    "tr": "/usr/local/bin/tr",
+    "true": "/usr/local/bin/true",
+    "truncate": "/usr/local/bin/truncate",
+    "tset": "/usr/local/bin/tset",
+    "tsort": "/usr/local/bin/tsort",
+    "tty": "/usr/local/bin/tty",
+    "uname": "/usr/local/bin/uname",
+    "unexpand": "/usr/local/bin/unexpand",
+    "uniq": "/usr/local/bin/uniq",
+    "unlink": "/usr/local/bin/unlink",
+    "unzstd": "/usr/local/bin/unzstd",
+    "uptime": "/usr/local/bin/uptime",
+    "users": "/usr/local/bin/users",
+    "uuclient": "/usr/local/bin/uuclient",
+    "vdir": "/usr/local/bin/vdir",
+    "wc": "/usr/local/bin/wc",
+    "who": "/usr/local/bin/who",
+    "whoami": "/usr/local/bin/whoami",
+    "yes": "/usr/local/bin/yes",
+    "zstd": "/usr/local/bin/zstd",
+    "zstdcat": "/usr/local/bin/zstdcat",
+    "zstdgrep": "/usr/local/bin/zstdgrep",
+    "zstdless": "/usr/local/bin/zstdless",
+    "zstdmt": "/usr/local/bin/zstdmt",
+    "env-execute": "/usr/local/env-execute"
+}
\ No newline at end of file