From ba96efe3b019afb96fb220183a74d4852b60dc4a Mon Sep 17 00:00:00 2001
From: github-actions <github-actions@users.noreply.github.com>
Date: Mon, 22 Jan 2024 00:47:05 +0000
Subject: [PATCH] Automated deployment with updated cache 2024-01-22

---
 counts.json                                   | 1700 +++++++++--------
 .../m/maegatk:0.2.0--pyhdfd78af_0.json        |  543 ++++++
 .../m/massdash:0.0.6--pyh7cba7a3_0.json       |  493 +++++
 .../m/mgatk:0.7.0--pyhdfd78af_0.json          |  335 ++++
 .../t/tntblast:2.61--hdcf5f25_0.json          |    4 +
 skips.json                                    |    1 +
 6 files changed, 2229 insertions(+), 847 deletions(-)
 create mode 100644 quay.io/biocontainers/m/maegatk:0.2.0--pyhdfd78af_0.json
 create mode 100644 quay.io/biocontainers/m/massdash:0.0.6--pyh7cba7a3_0.json
 create mode 100644 quay.io/biocontainers/m/mgatk:0.7.0--pyhdfd78af_0.json
 create mode 100644 quay.io/biocontainers/t/tntblast:2.61--hdcf5f25_0.json

diff --git a/counts.json b/counts.json
index 37da5ad..5f39135 100644
--- a/counts.json
+++ b/counts.json
@@ -2326,9 +2326,9 @@
     "2csfastq_1csfastq": 1,
     "2ft": 2,
     "2ndscore": 1,
-    "2to3": 3516,
-    "2to3-3.10": 770,
-    "2to3-3.11": 252,
+    "2to3": 3519,
+    "2to3-3.10": 772,
+    "2to3-3.11": 253,
     "2to3-3.12": 118,
     "2to3-3.4": 6,
     "2to3-3.5": 103,
@@ -2755,7 +2755,7 @@
     "Corrector_HA": 1,
     "CountUnmatchedSampleIndices": 1,
     "CoverageOfEachTrans": 1,
-    "CreateDOMDocument": 47,
+    "CreateDOMDocument": 48,
     "CreateGermlines.py": 2,
     "CreateIntervalsFiles": 1,
     "CrossMap.py": 3,
@@ -2808,8 +2808,8 @@
     "DNA2StdRegion": 1,
     "DNAMarkMaker": 1,
     "DNN_models.py": 1,
-    "DOMCount": 47,
-    "DOMPrint": 47,
+    "DOMCount": 48,
+    "DOMPrint": 48,
     "DRAM-setup.py": 1,
     "DRAM-v.py": 1,
     "DRAM.py": 1,
@@ -2895,7 +2895,7 @@
     "EnrichmentAnalysis": 1,
     "EnrichmentAnalysisForSingleTrans": 1,
     "EnsembleEnergy": 4,
-    "EnumVal": 47,
+    "EnumVal": 48,
     "Epifany": 1,
     "Epsilon-NB.py": 1,
     "ErrorCorrection": 1,
@@ -3459,7 +3459,7 @@
     "MaxQuantTaskCore.dll": 1,
     "MaxQuantTaskCore.runtimeconfig.json": 1,
     "Mayu.pl": 2,
-    "MemParse": 47,
+    "MemParse": 48,
     "MentaLiST.jl": 2,
     "MergeContigs": 16,
     "MergeContigs.py": 1,
@@ -3701,14 +3701,14 @@
     "PM-select-taxa": 1,
     "PM-split-seq": 1,
     "PM-update-taxa": 1,
-    "PParse": 47,
+    "PParse": 48,
     "PREFACE": 1,
     "PRScs.py": 1,
     "PReFerSim": 1,
     "PSCM_to_PSEM": 1,
     "PSCM_to_PSEM.cpp": 1,
     "PSMFeatureExtractor": 2,
-    "PSVIWriter": 47,
+    "PSVIWriter": 48,
     "PTMProphetParser": 2,
     "PTModel": 2,
     "PTPredict": 2,
@@ -3875,7 +3875,7 @@
     "QueueingSystem.dll": 1,
     "QuickDeconvolution": 1,
     "QuickSNP.py": 1,
-    "R": 4630,
+    "R": 4632,
     "R-scape": 2,
     "R-scape-sim": 2,
     "R-scape-sim-nobps": 2,
@@ -4056,7 +4056,7 @@
     "RearrangementCheck.py": 1,
     "RecombinationSummary.r": 1,
     "Red": 2,
-    "Redirect": 47,
+    "Redirect": 48,
     "ReduceGtf": 1,
     "RefMapOpt.sh": 2,
     "ReferenceOpt.sh": 2,
@@ -4101,7 +4101,7 @@
     "Rprof": 1,
     "Rsample": 4,
     "Rsample-smp": 4,
-    "Rscript": 4631,
+    "Rscript": 4633,
     "RunTHetA.py": 1,
     "SAGE": 1,
     "SAMMPileUpReader.py": 1,
@@ -4110,19 +4110,19 @@
     "SAMstats": 1,
     "SAMstatsParallel": 1,
     "SASpector": 1,
-    "SAX2Count": 47,
-    "SAX2Print": 47,
-    "SAXCount": 47,
-    "SAXPrint": 47,
+    "SAX2Count": 48,
+    "SAX2Print": 48,
+    "SAXCount": 48,
+    "SAXPrint": 48,
     "SCALOP": 1,
     "SCFtoCTG": 1,
-    "SCMPrint": 47,
+    "SCMPrint": 48,
     "SCNIC_analysis.py": 1,
     "SEACR_1.3.R": 1,
     "SEACR_1.3.sh": 1,
     "SELAM": 1,
     "SELAM_STATS": 1,
-    "SEnumVal": 47,
+    "SEnumVal": 48,
     "SGA-ICE.py": 1,
     "SHAPEIT5_ligate": 1,
     "SHAPEIT5_phase_common": 1,
@@ -4304,7 +4304,7 @@
     "StatisticReadsOnDNAsContam": 1,
     "StatisticSingle.py": 2,
     "Statistics.pm": 5,
-    "StdInParse": 47,
+    "StdInParse": 48,
     "StereoGene": 1,
     "StoatyDive.py": 1,
     "Stockholm.pm": 3,
@@ -4505,7 +4505,7 @@
     "XFDR": 2,
     "XGBoost.dll": 1,
     "XGBoostLib.dll": 1,
-    "XInclude": 47,
+    "XInclude": 48,
     "XMLValidator": 2,
     "XPressPeptideParser": 2,
     "XPressProteinRatioParser": 2,
@@ -4782,7 +4782,7 @@
     "abacas.1.3.1.pl": 1,
     "abacas.pl": 1,
     "abawaca": 1,
-    "abba-baba": 30,
+    "abba-baba": 31,
     "abeona": 1,
     "abi-dump": 20,
     "abi-dump.2": 17,
@@ -4873,7 +4873,7 @@
     "acdvalid": 23,
     "ace.pl": 56,
     "ace2contig": 2,
-    "ace2sam": 490,
+    "ace2sam": 491,
     "aci": 1,
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     "acountry": 4272,
@@ -4887,7 +4887,7 @@
     "actc": 1,
     "action_report.py": 1,
     "activate": 1342,
-    "activate-global-python-argcomplete": 330,
+    "activate-global-python-argcomplete": 332,
     "acyclic": 198,
     "adVNTR-Filtering": 1,
     "ada_model_builder_ntChange.R": 1,
@@ -4962,7 +4962,7 @@
     "addtit.pl": 2,
     "adf_checker.pl": 1,
     "adhocfilelist": 1,
-    "adig": 4419,
+    "adig": 4422,
     "adjustPeakFile.pl": 5,
     "adjustRedunGroupFile.pl": 5,
     "adjustScanRankerScoreByGroup": 2,
@@ -5078,7 +5078,7 @@
     "agrvate": 1,
     "agtsampleinforw.dll": 2,
     "ahmm-s": 1,
-    "ahost": 4419,
+    "ahost": 4422,
     "airr-tools": 5,
     "akita_data.py": 1,
     "akita_data_read.py": 1,
@@ -5341,7 +5341,7 @@
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     "annonars": 1,
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-    "annot-tsv": 3,
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     "annot_blast_btop2.pl": 7,
     "annotate": 243,
     "annotate-partitions.py": 7,
@@ -5723,7 +5723,7 @@
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-    "aserver": 407,
+    "aserver": 410,
     "asession": 2,
     "asgal": 1,
     "asgal_BitVector.py": 1,
@@ -5780,7 +5780,7 @@
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     "assign_taxonomy.py": 1,
     "assign_taxonomy_by_blast_result.py": 1,
-    "assistant": 241,
+    "assistant": 242,
     "assistant-qt4": 3,
     "astalavista": 1,
     "astats": 2,
@@ -5801,7 +5801,7 @@
     "atropos": 2,
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     "attotree": 1,
-    "attr": 36,
+    "attr": 37,
     "augment-bam": 1,
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     "augustify.py": 9,
@@ -5848,7 +5848,7 @@
     "autometa-taxonomy-majority-vote": 2,
     "autometa-unclustered-recruitment": 2,
     "autometa-update-databases": 2,
-    "autopoint": 5219,
+    "autopoint": 5222,
     "autoreconf.bak": 10,
     "autoscan.bak": 10,
     "autoupdate.bak": 10,
@@ -5901,7 +5901,7 @@
     "b2ct": 44,
     "b2sum": 78,
     "b2w": 1,
-    "bFst": 30,
+    "bFst": 31,
     "bPTR": 1,
     "babel": 7,
     "babel_add_hydrogens": 1,
@@ -5951,7 +5951,7 @@
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     "bali-subsample": 1,
     "balrog": 1,
-    "balsam": 36,
+    "balsam": 37,
     "baltic.py": 1,
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     "bam-extractor": 2,
@@ -6106,7 +6106,7 @@
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     "bamlastfilter": 1,
-    "bamleftalign": 26,
+    "bamleftalign": 27,
     "bamlibs.py": 1,
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@@ -6358,7 +6358,7 @@
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+    "bed2region": 31,
     "bed2tag.pl": 5,
     "bed62bed12.pl": 1,
     "bedClip": 2,
@@ -6446,9 +6446,9 @@
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     "bgreat": 4,
-    "bgzip": 674,
+    "bgzip": 675,
     "bgzip.pl": 4,
-    "bgziptabix": 30,
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     "bialign.py": 1,
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@@ -6620,7 +6620,7 @@
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     "blast2rma": 1,
     "blast2sam": 1,
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+    "blast2sam.pl": 491,
     "blastMapAnalyzer2.pl": 1,
     "blastMining": 1,
     "blastMining_lca.sh": 1,
@@ -6705,7 +6705,7 @@
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-    "bokeh": 58,
+    "bokeh": 59,
     "bold2utax.py": 1,
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     "bolt": 2,
@@ -6741,7 +6741,7 @@
     "bowtie2-inspect-l": 107,
     "bowtie2-inspect-s": 107,
     "bowtie2_stuff.py": 1,
-    "bowtie2sam.pl": 490,
+    "bowtie2sam.pl": 491,
     "bowtie_PE_separate_then_join.pl": 1,
     "bowtie_mapper.sh": 1,
     "box": 1,
@@ -6905,7 +6905,7 @@
     "broad_utils.py": 1,
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     "brooklyn_plot": 1,
-    "brotli": 376,
+    "brotli": 377,
     "browse": 16,
     "bs_call": 2,
     "bs_seeker2-align.py": 1,
@@ -7001,7 +7001,7 @@
     "bundlelinks": 1,
     "bundler": 17,
     "bunwarpj": 4,
-    "bunzip2": 6443,
+    "bunzip2": 6446,
     "burden_test_vase": 1,
     "burst_linux_DB12": 1,
     "burst_linux_DB15": 1,
@@ -7010,7 +7010,7 @@
     "buscolite": 1,
     "bustools": 2,
     "bvop": 1,
-    "bwa": 158,
+    "bwa": 159,
     "bwa-mem2": 7,
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     "bwa-mem2.avx2": 7,
@@ -7052,16 +7052,16 @@
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-    "bzcat": 6443,
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-    "bzdiff": 6443,
-    "bzegrep": 6443,
-    "bzfgrep": 6443,
-    "bzgrep": 6443,
-    "bzip2": 6443,
-    "bzip2recover": 6443,
-    "bzless": 6443,
-    "bzmore": 6443,
+    "bzcat": 6446,
+    "bzcmp": 6446,
+    "bzdiff": 6446,
+    "bzegrep": 6446,
+    "bzfgrep": 6446,
+    "bzgrep": 6446,
+    "bzip2": 6446,
+    "bzip2recover": 6446,
+    "bzless": 6446,
+    "bzmore": 6446,
     "c++": 4,
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     "c-index-test": 7,
@@ -7078,7 +7078,7 @@
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     "cPecanModifyHmm": 1,
     "cPecanRealign": 1,
-    "c_rehash": 7594,
+    "c_rehash": 7597,
     "ca2ace.pl": 3,
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@@ -7151,7 +7151,7 @@
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     "cai": 24,
-    "cairo-trace": 5069,
+    "cairo-trace": 5072,
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@@ -7218,7 +7218,7 @@
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@@ -7248,7 +7248,7 @@
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+    "captoinfo": 7529,
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@@ -7333,7 +7333,7 @@
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@@ -7439,7 +7439,7 @@
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     "certmgr": 13,
     "certtool": 30,
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@@ -7677,7 +7677,7 @@
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+    "cjpeg": 5675,
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@@ -7756,7 +7756,7 @@
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     "cleanup-stale-gcp-resources.py": 1,
     "cleanup.py": 1,
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+    "clear": 7529,
     "clearCNV": 1,
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@@ -7805,7 +7805,7 @@
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     "clstr2tree.pl": 43,
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@@ -7908,7 +7908,7 @@
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@@ -8102,7 +8102,7 @@
     "compileSpliceCands": 12,
     "compile_STARE_Linux.sh": 1,
     "compile_STARE_macOS.sh": 1,
-    "compile_et": 5693,
+    "compile_et": 5696,
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@@ -8399,7 +8399,7 @@
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+    "corelist": 1648,
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@@ -8486,7 +8486,7 @@
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     "coverage_table_convert.py": 1,
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+    "coverage_to_regions.py": 27,
     "coveralls": 4,
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@@ -8500,7 +8500,7 @@
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+    "cpan": 1648,
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@@ -8685,7 +8685,7 @@
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+    "csv-import": 45,
     "csv2kml": 1,
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@@ -8728,15 +8728,15 @@
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     "cuffquant": 2,
-    "cups-config": 162,
+    "cups-config": 165,
     "curare": 1,
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-    "curl": 5055,
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+    "curl": 5057,
+    "curl-config": 5822,
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     "cusp": 23,
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@@ -8940,16 +8940,16 @@
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     "dbsnp_iit": 11,
     "dbtell": 23,
-    "dbus-cleanup-sockets": 243,
-    "dbus-daemon": 243,
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-    "dbus-send": 243,
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-    "dbus-update-activation-environment": 243,
-    "dbus-uuidgen": 243,
+    "dbus-launch": 244,
+    "dbus-monitor": 244,
+    "dbus-run-session": 244,
+    "dbus-send": 244,
+    "dbus-test-tool": 244,
+    "dbus-update-activation-environment": 244,
+    "dbus-uuidgen": 244,
     "dbxcompress": 23,
     "dbxedam": 23,
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@@ -9168,7 +9168,7 @@
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-    "derb": 5733,
+    "derb": 5736,
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@@ -9192,7 +9192,7 @@
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@@ -9326,7 +9326,7 @@
     "django-admin": 4,
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-    "djpeg": 5672,
+    "djpeg": 5675,
     "dkfzbiasfilter.py": 1,
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@@ -9393,7 +9393,7 @@
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+    "docutils": 72,
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@@ -9638,7 +9638,7 @@
     "dumpBlob": 6,
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     "dumpContigsAsReads": 2,
-    "dumpContigsFromHeader": 30,
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     "dumpPBRLayoutStore": 3,
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@@ -9648,7 +9648,7 @@
     "dumpmates": 2,
     "dumppdf.py": 1,
     "dumpreads": 2,
-    "dumpsexp": 26,
+    "dumpsexp": 27,
     "dumpsolv": 23,
     "dunamai": 12,
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@@ -9827,10 +9827,10 @@
     "elandresult2bed": 1,
     "elastic-blast": 1,
     "elasticluster": 1,
-    "elasticurl": 36,
-    "elasticurl_cpp": 36,
-    "elastipubsub": 36,
-    "elastipubsub5": 25,
+    "elasticurl": 37,
+    "elasticurl_cpp": 37,
+    "elastipubsub": 37,
+    "elastipubsub5": 26,
     "elb-cost.py": 1,
     "elbadmin": 28,
     "elector": 1,
@@ -9874,8 +9874,8 @@
     "enano": 1,
     "enasearch": 1,
     "enc": 1,
-    "enc2xs": 1647,
-    "encguess": 1647,
+    "enc2xs": 1648,
+    "encguess": 1648,
     "encode2var": 1,
     "encode_dir": 1,
     "encode_exclude_loci": 1,
@@ -9906,24 +9906,24 @@
     "entrypoint.py": 1,
     "enumerate_paths.py": 1,
     "env": 79,
-    "env-execute": 6656,
+    "env-execute": 6660,
     "env.yml": 1,
-    "env_parallel": 98,
-    "env_parallel.ash": 98,
-    "env_parallel.bash": 98,
-    "env_parallel.csh": 98,
-    "env_parallel.dash": 98,
-    "env_parallel.fish": 98,
-    "env_parallel.ksh": 98,
-    "env_parallel.mksh": 98,
-    "env_parallel.pdksh": 98,
-    "env_parallel.sh": 98,
-    "env_parallel.tcsh": 98,
-    "env_parallel.zsh": 98,
+    "env_parallel": 99,
+    "env_parallel.ash": 99,
+    "env_parallel.bash": 99,
+    "env_parallel.csh": 99,
+    "env_parallel.dash": 99,
+    "env_parallel.fish": 99,
+    "env_parallel.ksh": 99,
+    "env_parallel.mksh": 99,
+    "env_parallel.pdksh": 99,
+    "env_parallel.sh": 99,
+    "env_parallel.tcsh": 99,
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-    "zstdless": 4861,
-    "zstdmt": 5063,
+    "zstd": 5066,
+    "zstdcat": 5066,
+    "zstdgrep": 4864,
+    "zstdless": 4864,
+    "zstdmt": 5066,
     "ztr_dump": 2
 }
\ No newline at end of file
diff --git a/quay.io/biocontainers/m/maegatk:0.2.0--pyhdfd78af_0.json b/quay.io/biocontainers/m/maegatk:0.2.0--pyhdfd78af_0.json
new file mode 100644
index 0000000..cbc7311
--- /dev/null
+++ b/quay.io/biocontainers/m/maegatk:0.2.0--pyhdfd78af_0.json
@@ -0,0 +1,543 @@
+{
+    "2to3": "/usr/local/bin/2to3",
+    "2to3-3.10": "/usr/local/bin/2to3-3.10",
+    "R": "/usr/local/bin/R",
+    "Rscript": "/usr/local/bin/Rscript",
+    "abba-baba": "/usr/local/bin/abba-baba",
+    "ace2sam": "/usr/local/bin/ace2sam",
+    "activate-global-python-argcomplete": "/usr/local/bin/activate-global-python-argcomplete",
+    "adig": "/usr/local/bin/adig",
+    "ahost": "/usr/local/bin/ahost",
+    "annot-tsv": "/usr/local/bin/annot-tsv",
+    "aserver": "/usr/local/bin/aserver",
+    "autopoint": "/usr/local/bin/autopoint",
+    "bFst": "/usr/local/bin/bFst",
+    "bamleftalign": "/usr/local/bin/bamleftalign",
+    "bed2region": "/usr/local/bin/bed2region",
+    "bgzip": "/usr/local/bin/bgzip",
+    "bgziptabix": "/usr/local/bin/bgziptabix",
+    "blast2sam.pl": "/usr/local/bin/blast2sam.pl",
+    "bowtie2sam.pl": "/usr/local/bin/bowtie2sam.pl",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bwa": "/usr/local/bin/bwa",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "cairo-trace": "/usr/local/bin/cairo-trace",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "cbc": "/usr/local/bin/cbc",
+    "cjpeg": "/usr/local/bin/cjpeg",
+    "clear": "/usr/local/bin/clear",
+    "clp": "/usr/local/bin/clp",
+    "compile_et": "/usr/local/bin/compile_et",
+    "corelist": "/usr/local/bin/corelist",
+    "coverage_to_regions.py": "/usr/local/bin/coverage_to_regions.py",
+    "cpan": "/usr/local/bin/cpan",
+    "cups-config": "/usr/local/bin/cups-config",
+    "curl": "/usr/local/bin/curl",
+    "curl-config": "/usr/local/bin/curl-config",
+    "derb": "/usr/local/bin/derb",
+    "djpeg": "/usr/local/bin/djpeg",
+    "docutils": "/usr/local/bin/docutils",
+    "dumpContigsFromHeader": "/usr/local/bin/dumpContigsFromHeader",
+    "enc2xs": "/usr/local/bin/enc2xs",
+    "encguess": "/usr/local/bin/encguess",
+    "env_parallel": "/usr/local/bin/env_parallel",
+    "env_parallel.ash": "/usr/local/bin/env_parallel.ash",
+    "env_parallel.bash": "/usr/local/bin/env_parallel.bash",
+    "env_parallel.csh": "/usr/local/bin/env_parallel.csh",
+    "env_parallel.dash": "/usr/local/bin/env_parallel.dash",
+    "env_parallel.fish": "/usr/local/bin/env_parallel.fish",
+    "env_parallel.ksh": "/usr/local/bin/env_parallel.ksh",
+    "env_parallel.mksh": "/usr/local/bin/env_parallel.mksh",
+    "env_parallel.pdksh": "/usr/local/bin/env_parallel.pdksh",
+    "env_parallel.sh": "/usr/local/bin/env_parallel.sh",
+    "env_parallel.tcsh": "/usr/local/bin/env_parallel.tcsh",
+    "env_parallel.zsh": "/usr/local/bin/env_parallel.zsh",
+    "envsubst": "/usr/local/bin/envsubst",
+    "export2sam.pl": "/usr/local/bin/export2sam.pl",
+    "f2py": "/usr/local/bin/f2py",
+    "fasta-sanitize.pl": "/usr/local/bin/fasta-sanitize.pl",
+    "fasta_generate_regions.py": "/usr/local/bin/fasta_generate_regions.py",
+    "fc-cache": "/usr/local/bin/fc-cache",
+    "fc-cat": "/usr/local/bin/fc-cat",
+    "fc-conflist": "/usr/local/bin/fc-conflist",
+    "fc-list": "/usr/local/bin/fc-list",
+    "fc-match": "/usr/local/bin/fc-match",
+    "fc-pattern": "/usr/local/bin/fc-pattern",
+    "fc-query": "/usr/local/bin/fc-query",
+    "fc-scan": "/usr/local/bin/fc-scan",
+    "fc-validate": "/usr/local/bin/fc-validate",
+    "fgbio": "/usr/local/bin/fgbio",
+    "freebayes": "/usr/local/bin/freebayes",
+    "freebayes-parallel": "/usr/local/bin/freebayes-parallel",
+    "freetype-config": "/usr/local/bin/freetype-config",
+    "fribidi": "/usr/local/bin/fribidi",
+    "genbrk": "/usr/local/bin/genbrk",
+    "gencfu": "/usr/local/bin/gencfu",
+    "gencnval": "/usr/local/bin/gencnval",
+    "gendict": "/usr/local/bin/gendict",
+    "generate_freebayes_region_scripts.sh": "/usr/local/bin/generate_freebayes_region_scripts.sh",
+    "genotypeSummary": "/usr/local/bin/genotypeSummary",
+    "genrb": "/usr/local/bin/genrb",
+    "gettext": "/usr/local/bin/gettext",
+    "gettext.sh": "/usr/local/bin/gettext.sh",
+    "gettextize": "/usr/local/bin/gettextize",
+    "gif2rgb": "/usr/local/bin/gif2rgb",
+    "gifbuild": "/usr/local/bin/gifbuild",
+    "gifclrmp": "/usr/local/bin/gifclrmp",
+    "giffix": "/usr/local/bin/giffix",
+    "giftext": "/usr/local/bin/giftext",
+    "giftool": "/usr/local/bin/giftool",
+    "gss-client": "/usr/local/bin/gss-client",
+    "h2ph": "/usr/local/bin/h2ph",
+    "h2xs": "/usr/local/bin/h2xs",
+    "hapLrt": "/usr/local/bin/hapLrt",
+    "hb-info": "/usr/local/bin/hb-info",
+    "hb-ot-shape-closure": "/usr/local/bin/hb-ot-shape-closure",
+    "hb-shape": "/usr/local/bin/hb-shape",
+    "hb-subset": "/usr/local/bin/hb-subset",
+    "hb-view": "/usr/local/bin/hb-view",
+    "htsfile": "/usr/local/bin/htsfile",
+    "humanfriendly": "/usr/local/bin/humanfriendly",
+    "iHS": "/usr/local/bin/iHS",
+    "icu-config": "/usr/local/bin/icu-config",
+    "icuexportdata": "/usr/local/bin/icuexportdata",
+    "icuinfo": "/usr/local/bin/icuinfo",
+    "idle3": "/usr/local/bin/idle3",
+    "idle3.10": "/usr/local/bin/idle3.10",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "installBiocDataPackage.sh": "/usr/local/bin/installBiocDataPackage.sh",
+    "instmodsh": "/usr/local/bin/instmodsh",
+    "interpolate_sam.pl": "/usr/local/bin/interpolate_sam.pl",
+    "ippeveprinter": "/usr/local/bin/ippeveprinter",
+    "ipptool": "/usr/local/bin/ipptool",
+    "jar": "/usr/local/bin/jar",
+    "jarsigner": "/usr/local/bin/jarsigner",
+    "java": "/usr/local/bin/java",
+    "javac": "/usr/local/bin/javac",
+    "javadoc": "/usr/local/bin/javadoc",
+    "javap": "/usr/local/bin/javap",
+    "jcmd": "/usr/local/bin/jcmd",
+    "jconsole": "/usr/local/bin/jconsole",
+    "jdb": "/usr/local/bin/jdb",
+    "jdeprscan": "/usr/local/bin/jdeprscan",
+    "jdeps": "/usr/local/bin/jdeps",
+    "jfr": "/usr/local/bin/jfr",
+    "jhsdb": "/usr/local/bin/jhsdb",
+    "jimage": "/usr/local/bin/jimage",
+    "jinfo": "/usr/local/bin/jinfo",
+    "jlink": "/usr/local/bin/jlink",
+    "jmap": "/usr/local/bin/jmap",
+    "jmod": "/usr/local/bin/jmod",
+    "jpackage": "/usr/local/bin/jpackage",
+    "jpegtran": "/usr/local/bin/jpegtran",
+    "jpgicc": "/usr/local/bin/jpgicc",
+    "jps": "/usr/local/bin/jps",
+    "jq": "/usr/local/bin/jq",
+    "jrunscript": "/usr/local/bin/jrunscript",
+    "jshell": "/usr/local/bin/jshell",
+    "json_pp": "/usr/local/bin/json_pp",
+    "jsonschema": "/usr/local/bin/jsonschema",
+    "jstack": "/usr/local/bin/jstack",
+    "jstat": "/usr/local/bin/jstat",
+    "jstatd": "/usr/local/bin/jstatd",
+    "jupyter": "/usr/local/bin/jupyter",
+    "jupyter-migrate": "/usr/local/bin/jupyter-migrate",
+    "jupyter-troubleshoot": "/usr/local/bin/jupyter-troubleshoot",
+    "jupyter-trust": "/usr/local/bin/jupyter-trust",
+    "jwebserver": "/usr/local/bin/jwebserver",
+    "k5srvutil": "/usr/local/bin/k5srvutil",
+    "kadmin": "/usr/local/bin/kadmin",
+    "kdestroy": "/usr/local/bin/kdestroy",
+    "keyctl": "/usr/local/bin/keyctl",
+    "keytool": "/usr/local/bin/keytool",
+    "kinit": "/usr/local/bin/kinit",
+    "klist": "/usr/local/bin/klist",
+    "kpasswd": "/usr/local/bin/kpasswd",
+    "krb5-config": "/usr/local/bin/krb5-config",
+    "ksu": "/usr/local/bin/ksu",
+    "kswitch": "/usr/local/bin/kswitch",
+    "ktutil": "/usr/local/bin/ktutil",
+    "kvno": "/usr/local/bin/kvno",
+    "libdeflate-gunzip": "/usr/local/bin/libdeflate-gunzip",
+    "libdeflate-gzip": "/usr/local/bin/libdeflate-gzip",
+    "libnetcfg": "/usr/local/bin/libnetcfg",
+    "libpng-config": "/usr/local/bin/libpng-config",
+    "libpng16-config": "/usr/local/bin/libpng16-config",
+    "linkicc": "/usr/local/bin/linkicc",
+    "lzcat": "/usr/local/bin/lzcat",
+    "lzcmp": "/usr/local/bin/lzcmp",
+    "lzdiff": "/usr/local/bin/lzdiff",
+    "lzegrep": "/usr/local/bin/lzegrep",
+    "lzfgrep": "/usr/local/bin/lzfgrep",
+    "lzgrep": "/usr/local/bin/lzgrep",
+    "lzless": "/usr/local/bin/lzless",
+    "lzma": "/usr/local/bin/lzma",
+    "lzmadec": "/usr/local/bin/lzmadec",
+    "lzmainfo": "/usr/local/bin/lzmainfo",
+    "lzmore": "/usr/local/bin/lzmore",
+    "maegatk": "/usr/local/bin/maegatk",
+    "make": "/usr/local/bin/make",
+    "makeconv": "/usr/local/bin/makeconv",
+    "maq2sam-long": "/usr/local/bin/maq2sam-long",
+    "maq2sam-short": "/usr/local/bin/maq2sam-short",
+    "md5fa": "/usr/local/bin/md5fa",
+    "md5sum-lite": "/usr/local/bin/md5sum-lite",
+    "meltEHH": "/usr/local/bin/meltEHH",
+    "msgattrib": "/usr/local/bin/msgattrib",
+    "msgcat": "/usr/local/bin/msgcat",
+    "msgcmp": "/usr/local/bin/msgcmp",
+    "msgcomm": "/usr/local/bin/msgcomm",
+    "msgconv": "/usr/local/bin/msgconv",
+    "msgen": "/usr/local/bin/msgen",
+    "msgexec": "/usr/local/bin/msgexec",
+    "msgfilter": "/usr/local/bin/msgfilter",
+    "msgfmt": "/usr/local/bin/msgfmt",
+    "msggrep": "/usr/local/bin/msggrep",
+    "msginit": "/usr/local/bin/msginit",
+    "msgmerge": "/usr/local/bin/msgmerge",
+    "msgunfmt": "/usr/local/bin/msgunfmt",
+    "msguniq": "/usr/local/bin/msguniq",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "ngettext": "/usr/local/bin/ngettext",
+    "nghttp": "/usr/local/bin/nghttp",
+    "nghttpd": "/usr/local/bin/nghttpd",
+    "nghttpx": "/usr/local/bin/nghttpx",
+    "niceload": "/usr/local/bin/niceload",
+    "normalize-iHS": "/usr/local/bin/normalize-iHS",
+    "normalizer": "/usr/local/bin/normalizer",
+    "novo2sam.pl": "/usr/local/bin/novo2sam.pl",
+    "onig-config": "/usr/local/bin/onig-config",
+    "openssl": "/usr/local/bin/openssl",
+    "pFst": "/usr/local/bin/pFst",
+    "pVst": "/usr/local/bin/pVst",
+    "pango-list": "/usr/local/bin/pango-list",
+    "pango-segmentation": "/usr/local/bin/pango-segmentation",
+    "pango-view": "/usr/local/bin/pango-view",
+    "parallel": "/usr/local/bin/parallel",
+    "parcat": "/usr/local/bin/parcat",
+    "parset": "/usr/local/bin/parset",
+    "parsort": "/usr/local/bin/parsort",
+    "pcre2-config": "/usr/local/bin/pcre2-config",
+    "pcre2_jit_test": "/usr/local/bin/pcre2_jit_test",
+    "pcre2grep": "/usr/local/bin/pcre2grep",
+    "pcre2test": "/usr/local/bin/pcre2test",
+    "perl": "/usr/local/bin/perl",
+    "perl5.32.1": "/usr/local/bin/perl5.32.1",
+    "perlbug": "/usr/local/bin/perlbug",
+    "perldoc": "/usr/local/bin/perldoc",
+    "perlivp": "/usr/local/bin/perlivp",
+    "perlthanks": "/usr/local/bin/perlthanks",
+    "permuteGPAT++": "/usr/local/bin/permuteGPAT++",
+    "permuteSmooth": "/usr/local/bin/permuteSmooth",
+    "piconv": "/usr/local/bin/piconv",
+    "pip": "/usr/local/bin/pip",
+    "pip3": "/usr/local/bin/pip3",
+    "pkgdata": "/usr/local/bin/pkgdata",
+    "pl2pm": "/usr/local/bin/pl2pm",
+    "plac_runner.py": "/usr/local/bin/plac_runner.py",
+    "plot-ampliconstats": "/usr/local/bin/plot-ampliconstats",
+    "plot-bamstats": "/usr/local/bin/plot-bamstats",
+    "plotHaps": "/usr/local/bin/plotHaps",
+    "png-fix-itxt": "/usr/local/bin/png-fix-itxt",
+    "pngfix": "/usr/local/bin/pngfix",
+    "pod2html": "/usr/local/bin/pod2html",
+    "pod2man": "/usr/local/bin/pod2man",
+    "pod2text": "/usr/local/bin/pod2text",
+    "pod2usage": "/usr/local/bin/pod2usage",
+    "podchecker": "/usr/local/bin/podchecker",
+    "popStats": "/usr/local/bin/popStats",
+    "prove": "/usr/local/bin/prove",
+    "psicc": "/usr/local/bin/psicc",
+    "psl2sam.pl": "/usr/local/bin/psl2sam.pl",
+    "ptar": "/usr/local/bin/ptar",
+    "ptardiff": "/usr/local/bin/ptardiff",
+    "ptargrep": "/usr/local/bin/ptargrep",
+    "pulptest": "/usr/local/bin/pulptest",
+    "py.test": "/usr/local/bin/py.test",
+    "pydoc": "/usr/local/bin/pydoc",
+    "pydoc3": "/usr/local/bin/pydoc3",
+    "pydoc3.10": "/usr/local/bin/pydoc3.10",
+    "pytest": "/usr/local/bin/pytest",
+    "python": "/usr/local/bin/python",
+    "python-argcomplete-check-easy-install-script": "/usr/local/bin/python-argcomplete-check-easy-install-script",
+    "python3": "/usr/local/bin/python3",
+    "python3-config": "/usr/local/bin/python3-config",
+    "python3.1": "/usr/local/bin/python3.1",
+    "python3.10": "/usr/local/bin/python3.10",
+    "python3.10-config": "/usr/local/bin/python3.10-config",
+    "qualfa2fq.pl": "/usr/local/bin/qualfa2fq.pl",
+    "rdjpgcom": "/usr/local/bin/rdjpgcom",
+    "recode-sr-latin": "/usr/local/bin/recode-sr-latin",
+    "register-python-argcomplete": "/usr/local/bin/register-python-argcomplete",
+    "reset": "/usr/local/bin/reset",
+    "rmiregistry": "/usr/local/bin/rmiregistry",
+    "rst2html.py": "/usr/local/bin/rst2html.py",
+    "rst2html4.py": "/usr/local/bin/rst2html4.py",
+    "rst2html5.py": "/usr/local/bin/rst2html5.py",
+    "rst2latex.py": "/usr/local/bin/rst2latex.py",
+    "rst2man.py": "/usr/local/bin/rst2man.py",
+    "rst2odt.py": "/usr/local/bin/rst2odt.py",
+    "rst2odt_prepstyles.py": "/usr/local/bin/rst2odt_prepstyles.py",
+    "rst2pseudoxml.py": "/usr/local/bin/rst2pseudoxml.py",
+    "rst2s5.py": "/usr/local/bin/rst2s5.py",
+    "rst2xetex.py": "/usr/local/bin/rst2xetex.py",
+    "rst2xml.py": "/usr/local/bin/rst2xml.py",
+    "rstpep2html.py": "/usr/local/bin/rstpep2html.py",
+    "sam2vcf.pl": "/usr/local/bin/sam2vcf.pl",
+    "sam_add_rg.pl": "/usr/local/bin/sam_add_rg.pl",
+    "samtools": "/usr/local/bin/samtools",
+    "samtools.pl": "/usr/local/bin/samtools.pl",
+    "sclient": "/usr/local/bin/sclient",
+    "sed": "/usr/local/bin/sed",
+    "segmentFst": "/usr/local/bin/segmentFst",
+    "segmentIhs": "/usr/local/bin/segmentIhs",
+    "sem": "/usr/local/bin/sem",
+    "seq_cache_populate.pl": "/usr/local/bin/seq_cache_populate.pl",
+    "sequenceDiversity": "/usr/local/bin/sequenceDiversity",
+    "serialver": "/usr/local/bin/serialver",
+    "shasum": "/usr/local/bin/shasum",
+    "sim_client": "/usr/local/bin/sim_client",
+    "smoother": "/usr/local/bin/smoother",
+    "snakemake": "/usr/local/bin/snakemake",
+    "snakemake-bash-completion": "/usr/local/bin/snakemake-bash-completion",
+    "soap2sam.pl": "/usr/local/bin/soap2sam.pl",
+    "splain": "/usr/local/bin/splain",
+    "split_ref_by_bai_datasize.py": "/usr/local/bin/split_ref_by_bai_datasize.py",
+    "sql": "/usr/local/bin/sql",
+    "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
+    "streamzip": "/usr/local/bin/streamzip",
+    "tabix": "/usr/local/bin/tabix",
+    "tabix++": "/usr/local/bin/tabix++",
+    "tabs": "/usr/local/bin/tabs",
+    "tabulate": "/usr/local/bin/tabulate",
+    "tclsh": "/usr/local/bin/tclsh",
+    "tclsh8.6": "/usr/local/bin/tclsh8.6",
+    "tic": "/usr/local/bin/tic",
+    "tiffcp": "/usr/local/bin/tiffcp",
+    "tiffdump": "/usr/local/bin/tiffdump",
+    "tiffinfo": "/usr/local/bin/tiffinfo",
+    "tiffset": "/usr/local/bin/tiffset",
+    "tiffsplit": "/usr/local/bin/tiffsplit",
+    "tificc": "/usr/local/bin/tificc",
+    "tjbench": "/usr/local/bin/tjbench",
+    "toe": "/usr/local/bin/toe",
+    "tomlq": "/usr/local/bin/tomlq",
+    "tput": "/usr/local/bin/tput",
+    "transicc": "/usr/local/bin/transicc",
+    "tset": "/usr/local/bin/tset",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unxz": "/usr/local/bin/unxz",
+    "unzstd": "/usr/local/bin/unzstd",
+    "update_version.sh": "/usr/local/bin/update_version.sh",
+    "uuclient": "/usr/local/bin/uuclient",
+    "vcf2bed.py": "/usr/local/bin/vcf2bed.py",
+    "vcf2dag": "/usr/local/bin/vcf2dag",
+    "vcf2fasta": "/usr/local/bin/vcf2fasta",
+    "vcf2sqlite.py": "/usr/local/bin/vcf2sqlite.py",
+    "vcf2tsv": "/usr/local/bin/vcf2tsv",
+    "vcf_strip_extra_headers": "/usr/local/bin/vcf_strip_extra_headers",
+    "vcfaddinfo": "/usr/local/bin/vcfaddinfo",
+    "vcfafpath": "/usr/local/bin/vcfafpath",
+    "vcfallelicprimitives": "/usr/local/bin/vcfallelicprimitives",
+    "vcfaltcount": "/usr/local/bin/vcfaltcount",
+    "vcfannotate": "/usr/local/bin/vcfannotate",
+    "vcfannotategenotypes": "/usr/local/bin/vcfannotategenotypes",
+    "vcfbiallelic": "/usr/local/bin/vcfbiallelic",
+    "vcfbreakmulti": "/usr/local/bin/vcfbreakmulti",
+    "vcfcat": "/usr/local/bin/vcfcat",
+    "vcfcheck": "/usr/local/bin/vcfcheck",
+    "vcfclassify": "/usr/local/bin/vcfclassify",
+    "vcfcleancomplex": "/usr/local/bin/vcfcleancomplex",
+    "vcfclearid": "/usr/local/bin/vcfclearid",
+    "vcfclearinfo": "/usr/local/bin/vcfclearinfo",
+    "vcfcombine": "/usr/local/bin/vcfcombine",
+    "vcfcommonsamples": "/usr/local/bin/vcfcommonsamples",
+    "vcfcomplex": "/usr/local/bin/vcfcomplex",
+    "vcfcountalleles": "/usr/local/bin/vcfcountalleles",
+    "vcfcreatemulti": "/usr/local/bin/vcfcreatemulti",
+    "vcfdistance": "/usr/local/bin/vcfdistance",
+    "vcfecho": "/usr/local/bin/vcfecho",
+    "vcfentropy": "/usr/local/bin/vcfentropy",
+    "vcfevenregions": "/usr/local/bin/vcfevenregions",
+    "vcffilter": "/usr/local/bin/vcffilter",
+    "vcffirstheader": "/usr/local/bin/vcffirstheader",
+    "vcffixup": "/usr/local/bin/vcffixup",
+    "vcfflatten": "/usr/local/bin/vcfflatten",
+    "vcfgeno2alleles": "/usr/local/bin/vcfgeno2alleles",
+    "vcfgeno2haplo": "/usr/local/bin/vcfgeno2haplo",
+    "vcfgenosamplenames": "/usr/local/bin/vcfgenosamplenames",
+    "vcfgenosummarize": "/usr/local/bin/vcfgenosummarize",
+    "vcfgenotypecompare": "/usr/local/bin/vcfgenotypecompare",
+    "vcfgenotypes": "/usr/local/bin/vcfgenotypes",
+    "vcfglbound": "/usr/local/bin/vcfglbound",
+    "vcfglxgt": "/usr/local/bin/vcfglxgt",
+    "vcfgtcompare.sh": "/usr/local/bin/vcfgtcompare.sh",
+    "vcfhetcount": "/usr/local/bin/vcfhetcount",
+    "vcfhethomratio": "/usr/local/bin/vcfhethomratio",
+    "vcfindelproximity": "/usr/local/bin/vcfindelproximity",
+    "vcfindels": "/usr/local/bin/vcfindels",
+    "vcfindex": "/usr/local/bin/vcfindex",
+    "vcfinfo2qual": "/usr/local/bin/vcfinfo2qual",
+    "vcfinfosummarize": "/usr/local/bin/vcfinfosummarize",
+    "vcfintersect": "/usr/local/bin/vcfintersect",
+    "vcfjoincalls": "/usr/local/bin/vcfjoincalls",
+    "vcfkeepgeno": "/usr/local/bin/vcfkeepgeno",
+    "vcfkeepinfo": "/usr/local/bin/vcfkeepinfo",
+    "vcfkeepsamples": "/usr/local/bin/vcfkeepsamples",
+    "vcfld": "/usr/local/bin/vcfld",
+    "vcfleftalign": "/usr/local/bin/vcfleftalign",
+    "vcflength": "/usr/local/bin/vcflength",
+    "vcfmultiallelic": "/usr/local/bin/vcfmultiallelic",
+    "vcfmultiway": "/usr/local/bin/vcfmultiway",
+    "vcfmultiwayscripts": "/usr/local/bin/vcfmultiwayscripts",
+    "vcfnobiallelicsnps": "/usr/local/bin/vcfnobiallelicsnps",
+    "vcfnoindels": "/usr/local/bin/vcfnoindels",
+    "vcfnosnps": "/usr/local/bin/vcfnosnps",
+    "vcfnulldotslashdot": "/usr/local/bin/vcfnulldotslashdot",
+    "vcfnullgenofields": "/usr/local/bin/vcfnullgenofields",
+    "vcfnumalt": "/usr/local/bin/vcfnumalt",
+    "vcfoverlay": "/usr/local/bin/vcfoverlay",
+    "vcfparsealts": "/usr/local/bin/vcfparsealts",
+    "vcfplotaltdiscrepancy.r": "/usr/local/bin/vcfplotaltdiscrepancy.r",
+    "vcfplotaltdiscrepancy.sh": "/usr/local/bin/vcfplotaltdiscrepancy.sh",
+    "vcfplotsitediscrepancy.r": "/usr/local/bin/vcfplotsitediscrepancy.r",
+    "vcfplottstv.sh": "/usr/local/bin/vcfplottstv.sh",
+    "vcfprimers": "/usr/local/bin/vcfprimers",
+    "vcfprintaltdiscrepancy.r": "/usr/local/bin/vcfprintaltdiscrepancy.r",
+    "vcfprintaltdiscrepancy.sh": "/usr/local/bin/vcfprintaltdiscrepancy.sh",
+    "vcfqual2info": "/usr/local/bin/vcfqual2info",
+    "vcfqualfilter": "/usr/local/bin/vcfqualfilter",
+    "vcfrandom": "/usr/local/bin/vcfrandom",
+    "vcfrandomsample": "/usr/local/bin/vcfrandomsample",
+    "vcfregionreduce": "/usr/local/bin/vcfregionreduce",
+    "vcfregionreduce_and_cut": "/usr/local/bin/vcfregionreduce_and_cut",
+    "vcfregionreduce_pipe": "/usr/local/bin/vcfregionreduce_pipe",
+    "vcfregionreduce_uncompressed": "/usr/local/bin/vcfregionreduce_uncompressed",
+    "vcfremap": "/usr/local/bin/vcfremap",
+    "vcfremoveaberrantgenotypes": "/usr/local/bin/vcfremoveaberrantgenotypes",
+    "vcfremovenonATGC": "/usr/local/bin/vcfremovenonATGC",
+    "vcfremovesamples": "/usr/local/bin/vcfremovesamples",
+    "vcfroc": "/usr/local/bin/vcfroc",
+    "vcfsample2info": "/usr/local/bin/vcfsample2info",
+    "vcfsamplediff": "/usr/local/bin/vcfsamplediff",
+    "vcfsamplenames": "/usr/local/bin/vcfsamplenames",
+    "vcfsitesummarize": "/usr/local/bin/vcfsitesummarize",
+    "vcfsnps": "/usr/local/bin/vcfsnps",
+    "vcfsort": "/usr/local/bin/vcfsort",
+    "vcfstats": "/usr/local/bin/vcfstats",
+    "vcfstreamsort": "/usr/local/bin/vcfstreamsort",
+    "vcfuniq": "/usr/local/bin/vcfuniq",
+    "vcfuniqalleles": "/usr/local/bin/vcfuniqalleles",
+    "vcfvarstats": "/usr/local/bin/vcfvarstats",
+    "vcfwave": "/usr/local/bin/vcfwave",
+    "wcFst": "/usr/local/bin/wcFst",
+    "wgsim": "/usr/local/bin/wgsim",
+    "wgsim_eval.pl": "/usr/local/bin/wgsim_eval.pl",
+    "wheel": "/usr/local/bin/wheel",
+    "wish": "/usr/local/bin/wish",
+    "wish8.6": "/usr/local/bin/wish8.6",
+    "wrjpgcom": "/usr/local/bin/wrjpgcom",
+    "x86_64-conda-linux-gnu-addr2line": "/usr/local/bin/x86_64-conda-linux-gnu-addr2line",
+    "x86_64-conda-linux-gnu-ar": "/usr/local/bin/x86_64-conda-linux-gnu-ar",
+    "x86_64-conda-linux-gnu-as": "/usr/local/bin/x86_64-conda-linux-gnu-as",
+    "x86_64-conda-linux-gnu-c++": "/usr/local/bin/x86_64-conda-linux-gnu-c++",
+    "x86_64-conda-linux-gnu-c++filt": "/usr/local/bin/x86_64-conda-linux-gnu-c++filt",
+    "x86_64-conda-linux-gnu-c89": "/usr/local/bin/x86_64-conda-linux-gnu-c89",
+    "x86_64-conda-linux-gnu-c99": "/usr/local/bin/x86_64-conda-linux-gnu-c99",
+    "x86_64-conda-linux-gnu-cc": "/usr/local/bin/x86_64-conda-linux-gnu-cc",
+    "x86_64-conda-linux-gnu-cpp": "/usr/local/bin/x86_64-conda-linux-gnu-cpp",
+    "x86_64-conda-linux-gnu-dwp": "/usr/local/bin/x86_64-conda-linux-gnu-dwp",
+    "x86_64-conda-linux-gnu-elfedit": "/usr/local/bin/x86_64-conda-linux-gnu-elfedit",
+    "x86_64-conda-linux-gnu-f95": "/usr/local/bin/x86_64-conda-linux-gnu-f95",
+    "x86_64-conda-linux-gnu-g++": "/usr/local/bin/x86_64-conda-linux-gnu-g++",
+    "x86_64-conda-linux-gnu-gcc": "/usr/local/bin/x86_64-conda-linux-gnu-gcc",
+    "x86_64-conda-linux-gnu-gcc-ar": "/usr/local/bin/x86_64-conda-linux-gnu-gcc-ar",
+    "x86_64-conda-linux-gnu-gcc-nm": "/usr/local/bin/x86_64-conda-linux-gnu-gcc-nm",
+    "x86_64-conda-linux-gnu-gcc-ranlib": "/usr/local/bin/x86_64-conda-linux-gnu-gcc-ranlib",
+    "x86_64-conda-linux-gnu-gcov": "/usr/local/bin/x86_64-conda-linux-gnu-gcov",
+    "x86_64-conda-linux-gnu-gcov-dump": "/usr/local/bin/x86_64-conda-linux-gnu-gcov-dump",
+    "x86_64-conda-linux-gnu-gcov-tool": "/usr/local/bin/x86_64-conda-linux-gnu-gcov-tool",
+    "x86_64-conda-linux-gnu-gfortran": "/usr/local/bin/x86_64-conda-linux-gnu-gfortran",
+    "x86_64-conda-linux-gnu-gprof": "/usr/local/bin/x86_64-conda-linux-gnu-gprof",
+    "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
+    "x86_64-conda-linux-gnu-ld.bfd": "/usr/local/bin/x86_64-conda-linux-gnu-ld.bfd",
+    "x86_64-conda-linux-gnu-ld.gold": "/usr/local/bin/x86_64-conda-linux-gnu-ld.gold",
+    "x86_64-conda-linux-gnu-nm": "/usr/local/bin/x86_64-conda-linux-gnu-nm",
+    "x86_64-conda-linux-gnu-objcopy": "/usr/local/bin/x86_64-conda-linux-gnu-objcopy",
+    "x86_64-conda-linux-gnu-objdump": "/usr/local/bin/x86_64-conda-linux-gnu-objdump",
+    "x86_64-conda-linux-gnu-ranlib": "/usr/local/bin/x86_64-conda-linux-gnu-ranlib",
+    "x86_64-conda-linux-gnu-readelf": "/usr/local/bin/x86_64-conda-linux-gnu-readelf",
+    "x86_64-conda-linux-gnu-size": "/usr/local/bin/x86_64-conda-linux-gnu-size",
+    "x86_64-conda-linux-gnu-strings": "/usr/local/bin/x86_64-conda-linux-gnu-strings",
+    "x86_64-conda-linux-gnu-strip": "/usr/local/bin/x86_64-conda-linux-gnu-strip",
+    "x86_64-conda_cos6-linux-gnu-addr2line": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-addr2line",
+    "x86_64-conda_cos6-linux-gnu-ar": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ar",
+    "x86_64-conda_cos6-linux-gnu-as": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-as",
+    "x86_64-conda_cos6-linux-gnu-c++": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c++",
+    "x86_64-conda_cos6-linux-gnu-c++filt": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c++filt",
+    "x86_64-conda_cos6-linux-gnu-c89": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c89",
+    "x86_64-conda_cos6-linux-gnu-c99": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c99",
+    "x86_64-conda_cos6-linux-gnu-cc": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-cc",
+    "x86_64-conda_cos6-linux-gnu-cpp": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-cpp",
+    "x86_64-conda_cos6-linux-gnu-dwp": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-dwp",
+    "x86_64-conda_cos6-linux-gnu-elfedit": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-elfedit",
+    "x86_64-conda_cos6-linux-gnu-f95": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-f95",
+    "x86_64-conda_cos6-linux-gnu-g++": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-g++",
+    "x86_64-conda_cos6-linux-gnu-gcc": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc",
+    "x86_64-conda_cos6-linux-gnu-gcc-ar": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc-ar",
+    "x86_64-conda_cos6-linux-gnu-gcc-nm": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc-nm",
+    "x86_64-conda_cos6-linux-gnu-gcc-ranlib": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc-ranlib",
+    "x86_64-conda_cos6-linux-gnu-gcov": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcov",
+    "x86_64-conda_cos6-linux-gnu-gcov-dump": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcov-dump",
+    "x86_64-conda_cos6-linux-gnu-gcov-tool": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcov-tool",
+    "x86_64-conda_cos6-linux-gnu-gfortran": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gfortran",
+    "x86_64-conda_cos6-linux-gnu-gprof": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gprof",
+    "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
+    "x86_64-conda_cos6-linux-gnu-ld.bfd": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld.bfd",
+    "x86_64-conda_cos6-linux-gnu-ld.gold": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld.gold",
+    "x86_64-conda_cos6-linux-gnu-nm": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-nm",
+    "x86_64-conda_cos6-linux-gnu-objcopy": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-objcopy",
+    "x86_64-conda_cos6-linux-gnu-objdump": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-objdump",
+    "x86_64-conda_cos6-linux-gnu-ranlib": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ranlib",
+    "x86_64-conda_cos6-linux-gnu-readelf": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-readelf",
+    "x86_64-conda_cos6-linux-gnu-size": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-size",
+    "x86_64-conda_cos6-linux-gnu-strings": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-strings",
+    "x86_64-conda_cos6-linux-gnu-strip": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-strip",
+    "xa2multi.pl": "/usr/local/bin/xa2multi.pl",
+    "xgettext": "/usr/local/bin/xgettext",
+    "xmlwf": "/usr/local/bin/xmlwf",
+    "xq": "/usr/local/bin/xq",
+    "xsubpp": "/usr/local/bin/xsubpp",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore",
+    "yq": "/usr/local/bin/yq",
+    "yte": "/usr/local/bin/yte",
+    "zipdetails": "/usr/local/bin/zipdetails",
+    "zoom2sam.pl": "/usr/local/bin/zoom2sam.pl",
+    "zstd": "/usr/local/bin/zstd",
+    "zstdcat": "/usr/local/bin/zstdcat",
+    "zstdgrep": "/usr/local/bin/zstdgrep",
+    "zstdless": "/usr/local/bin/zstdless",
+    "zstdmt": "/usr/local/bin/zstdmt",
+    "env-execute": "/usr/local/env-execute"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/m/massdash:0.0.6--pyh7cba7a3_0.json b/quay.io/biocontainers/m/massdash:0.0.6--pyh7cba7a3_0.json
new file mode 100644
index 0000000..d3d311d
--- /dev/null
+++ b/quay.io/biocontainers/m/massdash:0.0.6--pyh7cba7a3_0.json
@@ -0,0 +1,493 @@
+{
+    "2to3": "/usr/local/bin/2to3",
+    "2to3-3.11": "/usr/local/bin/2to3-3.11",
+    "CreateDOMDocument": "/usr/local/bin/CreateDOMDocument",
+    "DOMCount": "/usr/local/bin/DOMCount",
+    "DOMPrint": "/usr/local/bin/DOMPrint",
+    "EnumVal": "/usr/local/bin/EnumVal",
+    "MemParse": "/usr/local/bin/MemParse",
+    "PParse": "/usr/local/bin/PParse",
+    "PSVIWriter": "/usr/local/bin/PSVIWriter",
+    "Redirect": "/usr/local/bin/Redirect",
+    "SAX2Count": "/usr/local/bin/SAX2Count",
+    "SAX2Print": "/usr/local/bin/SAX2Print",
+    "SAXCount": "/usr/local/bin/SAXCount",
+    "SAXPrint": "/usr/local/bin/SAXPrint",
+    "SCMPrint": "/usr/local/bin/SCMPrint",
+    "SEnumVal": "/usr/local/bin/SEnumVal",
+    "StdInParse": "/usr/local/bin/StdInParse",
+    "XInclude": "/usr/local/bin/XInclude",
+    "adig": "/usr/local/bin/adig",
+    "ahost": "/usr/local/bin/ahost",
+    "aserver": "/usr/local/bin/aserver",
+    "assistant": "/usr/local/bin/assistant",
+    "attr": "/usr/local/bin/attr",
+    "autopoint": "/usr/local/bin/autopoint",
+    "balsam": "/usr/local/bin/balsam",
+    "bokeh": "/usr/local/bin/bokeh",
+    "brotli": "/usr/local/bin/brotli",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "cairo-trace": "/usr/local/bin/cairo-trace",
+    "canbusutil": "/usr/local/bin/canbusutil",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "cbc": "/usr/local/bin/cbc",
+    "certutil": "/usr/local/bin/certutil",
+    "cjpeg": "/usr/local/bin/cjpeg",
+    "clear": "/usr/local/bin/clear",
+    "clp": "/usr/local/bin/clp",
+    "cmtime": "/usr/local/bin/cmtime",
+    "compile_et": "/usr/local/bin/compile_et",
+    "csv-import": "/usr/local/bin/csv-import",
+    "cups-config": "/usr/local/bin/cups-config",
+    "curl-config": "/usr/local/bin/curl-config",
+    "curve_keygen": "/usr/local/bin/curve_keygen",
+    "dbus-cleanup-sockets": "/usr/local/bin/dbus-cleanup-sockets",
+    "dbus-daemon": "/usr/local/bin/dbus-daemon",
+    "dbus-launch": "/usr/local/bin/dbus-launch",
+    "dbus-monitor": "/usr/local/bin/dbus-monitor",
+    "dbus-run-session": "/usr/local/bin/dbus-run-session",
+    "dbus-send": "/usr/local/bin/dbus-send",
+    "dbus-test-tool": "/usr/local/bin/dbus-test-tool",
+    "dbus-update-activation-environment": "/usr/local/bin/dbus-update-activation-environment",
+    "dbus-uuidgen": "/usr/local/bin/dbus-uuidgen",
+    "derb": "/usr/local/bin/derb",
+    "designer": "/usr/local/bin/designer",
+    "djpeg": "/usr/local/bin/djpeg",
+    "dumpsexp": "/usr/local/bin/dumpsexp",
+    "elasticurl": "/usr/local/bin/elasticurl",
+    "elasticurl_cpp": "/usr/local/bin/elasticurl_cpp",
+    "elastipubsub": "/usr/local/bin/elastipubsub",
+    "elastipubsub5": "/usr/local/bin/elastipubsub5",
+    "envsubst": "/usr/local/bin/envsubst",
+    "f2py": "/usr/local/bin/f2py",
+    "f2py3": "/usr/local/bin/f2py3",
+    "f2py3.11": "/usr/local/bin/f2py3.11",
+    "fc-cache": "/usr/local/bin/fc-cache",
+    "fc-cat": "/usr/local/bin/fc-cat",
+    "fc-conflist": "/usr/local/bin/fc-conflist",
+    "fc-list": "/usr/local/bin/fc-list",
+    "fc-match": "/usr/local/bin/fc-match",
+    "fc-pattern": "/usr/local/bin/fc-pattern",
+    "fc-query": "/usr/local/bin/fc-query",
+    "fc-scan": "/usr/local/bin/fc-scan",
+    "fc-validate": "/usr/local/bin/fc-validate",
+    "fixqt4headers.pl": "/usr/local/bin/fixqt4headers.pl",
+    "flac": "/usr/local/bin/flac",
+    "fonttools": "/usr/local/bin/fonttools",
+    "freetype-config": "/usr/local/bin/freetype-config",
+    "gapplication": "/usr/local/bin/gapplication",
+    "gdbus": "/usr/local/bin/gdbus",
+    "gdbus-codegen": "/usr/local/bin/gdbus-codegen",
+    "genbrk": "/usr/local/bin/genbrk",
+    "gencfu": "/usr/local/bin/gencfu",
+    "gencnval": "/usr/local/bin/gencnval",
+    "gendict": "/usr/local/bin/gendict",
+    "genl-ctrl-list": "/usr/local/bin/genl-ctrl-list",
+    "genrb": "/usr/local/bin/genrb",
+    "getfattr": "/usr/local/bin/getfattr",
+    "gettext": "/usr/local/bin/gettext",
+    "gettext.sh": "/usr/local/bin/gettext.sh",
+    "gettextize": "/usr/local/bin/gettextize",
+    "gflags_completions.sh": "/usr/local/bin/gflags_completions.sh",
+    "gif2h5": "/usr/local/bin/gif2h5",
+    "gio": "/usr/local/bin/gio",
+    "gio-querymodules": "/usr/local/bin/gio-querymodules",
+    "glib-compile-resources": "/usr/local/bin/glib-compile-resources",
+    "glib-compile-schemas": "/usr/local/bin/glib-compile-schemas",
+    "glib-genmarshal": "/usr/local/bin/glib-genmarshal",
+    "glib-gettextize": "/usr/local/bin/glib-gettextize",
+    "glib-mkenums": "/usr/local/bin/glib-mkenums",
+    "gobject-query": "/usr/local/bin/gobject-query",
+    "gpg-error": "/usr/local/bin/gpg-error",
+    "gpgrt-config": "/usr/local/bin/gpgrt-config",
+    "gresource": "/usr/local/bin/gresource",
+    "grpc_cpp_plugin": "/usr/local/bin/grpc_cpp_plugin",
+    "grpc_csharp_plugin": "/usr/local/bin/grpc_csharp_plugin",
+    "grpc_node_plugin": "/usr/local/bin/grpc_node_plugin",
+    "grpc_objective_c_plugin": "/usr/local/bin/grpc_objective_c_plugin",
+    "grpc_php_plugin": "/usr/local/bin/grpc_php_plugin",
+    "grpc_python_plugin": "/usr/local/bin/grpc_python_plugin",
+    "grpc_ruby_plugin": "/usr/local/bin/grpc_ruby_plugin",
+    "gsettings": "/usr/local/bin/gsettings",
+    "gss-client": "/usr/local/bin/gss-client",
+    "gst-device-monitor-1.0": "/usr/local/bin/gst-device-monitor-1.0",
+    "gst-discoverer-1.0": "/usr/local/bin/gst-discoverer-1.0",
+    "gst-inspect-1.0": "/usr/local/bin/gst-inspect-1.0",
+    "gst-launch-1.0": "/usr/local/bin/gst-launch-1.0",
+    "gst-play-1.0": "/usr/local/bin/gst-play-1.0",
+    "gst-stats-1.0": "/usr/local/bin/gst-stats-1.0",
+    "gst-typefind-1.0": "/usr/local/bin/gst-typefind-1.0",
+    "gtester": "/usr/local/bin/gtester",
+    "gtester-report": "/usr/local/bin/gtester-report",
+    "h52gif": "/usr/local/bin/h52gif",
+    "h5c++": "/usr/local/bin/h5c++",
+    "h5cc": "/usr/local/bin/h5cc",
+    "h5clear": "/usr/local/bin/h5clear",
+    "h5copy": "/usr/local/bin/h5copy",
+    "h5debug": "/usr/local/bin/h5debug",
+    "h5delete": "/usr/local/bin/h5delete",
+    "h5diff": "/usr/local/bin/h5diff",
+    "h5dump": "/usr/local/bin/h5dump",
+    "h5fc": "/usr/local/bin/h5fc",
+    "h5format_convert": "/usr/local/bin/h5format_convert",
+    "h5fuse.sh": "/usr/local/bin/h5fuse.sh",
+    "h5import": "/usr/local/bin/h5import",
+    "h5jam": "/usr/local/bin/h5jam",
+    "h5ls": "/usr/local/bin/h5ls",
+    "h5mkgrp": "/usr/local/bin/h5mkgrp",
+    "h5perf_serial": "/usr/local/bin/h5perf_serial",
+    "h5redeploy": "/usr/local/bin/h5redeploy",
+    "h5repack": "/usr/local/bin/h5repack",
+    "h5repart": "/usr/local/bin/h5repart",
+    "h5stat": "/usr/local/bin/h5stat",
+    "h5unjam": "/usr/local/bin/h5unjam",
+    "h5watch": "/usr/local/bin/h5watch",
+    "hb-info": "/usr/local/bin/hb-info",
+    "hb-ot-shape-closure": "/usr/local/bin/hb-ot-shape-closure",
+    "hb-shape": "/usr/local/bin/hb-shape",
+    "hb-subset": "/usr/local/bin/hb-subset",
+    "hb-view": "/usr/local/bin/hb-view",
+    "hmac256": "/usr/local/bin/hmac256",
+    "ib_acme": "/usr/local/bin/ib_acme",
+    "ibv_asyncwatch": "/usr/local/bin/ibv_asyncwatch",
+    "ibv_devices": "/usr/local/bin/ibv_devices",
+    "ibv_devinfo": "/usr/local/bin/ibv_devinfo",
+    "ibv_rc_pingpong": "/usr/local/bin/ibv_rc_pingpong",
+    "ibv_srq_pingpong": "/usr/local/bin/ibv_srq_pingpong",
+    "ibv_uc_pingpong": "/usr/local/bin/ibv_uc_pingpong",
+    "ibv_ud_pingpong": "/usr/local/bin/ibv_ud_pingpong",
+    "ibv_xsrq_pingpong": "/usr/local/bin/ibv_xsrq_pingpong",
+    "icu-config": "/usr/local/bin/icu-config",
+    "icuexportdata": "/usr/local/bin/icuexportdata",
+    "icuinfo": "/usr/local/bin/icuinfo",
+    "idiag-socket-details": "/usr/local/bin/idiag-socket-details",
+    "idle3": "/usr/local/bin/idle3",
+    "idle3.11": "/usr/local/bin/idle3.11",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "io_demo": "/usr/local/bin/io_demo",
+    "ippeveprinter": "/usr/local/bin/ippeveprinter",
+    "ipptool": "/usr/local/bin/ipptool",
+    "ipython": "/usr/local/bin/ipython",
+    "ipython3": "/usr/local/bin/ipython3",
+    "jpegtran": "/usr/local/bin/jpegtran",
+    "jpgicc": "/usr/local/bin/jpgicc",
+    "jsonschema": "/usr/local/bin/jsonschema",
+    "jupyter": "/usr/local/bin/jupyter",
+    "jupyter-kernel": "/usr/local/bin/jupyter-kernel",
+    "jupyter-kernelspec": "/usr/local/bin/jupyter-kernelspec",
+    "jupyter-migrate": "/usr/local/bin/jupyter-migrate",
+    "jupyter-run": "/usr/local/bin/jupyter-run",
+    "jupyter-troubleshoot": "/usr/local/bin/jupyter-troubleshoot",
+    "k5srvutil": "/usr/local/bin/k5srvutil",
+    "kadmin": "/usr/local/bin/kadmin",
+    "kdestroy": "/usr/local/bin/kdestroy",
+    "keyctl": "/usr/local/bin/keyctl",
+    "kinit": "/usr/local/bin/kinit",
+    "klist": "/usr/local/bin/klist",
+    "kpasswd": "/usr/local/bin/kpasswd",
+    "krb5-config": "/usr/local/bin/krb5-config",
+    "ksu": "/usr/local/bin/ksu",
+    "kswitch": "/usr/local/bin/kswitch",
+    "ktutil": "/usr/local/bin/ktutil",
+    "kvno": "/usr/local/bin/kvno",
+    "lame": "/usr/local/bin/lame",
+    "lconvert": "/usr/local/bin/lconvert",
+    "libdeflate-gunzip": "/usr/local/bin/libdeflate-gunzip",
+    "libdeflate-gzip": "/usr/local/bin/libdeflate-gzip",
+    "libgcrypt-config": "/usr/local/bin/libgcrypt-config",
+    "libpng-config": "/usr/local/bin/libpng-config",
+    "libpng16-config": "/usr/local/bin/libpng16-config",
+    "linguist": "/usr/local/bin/linguist",
+    "linkicc": "/usr/local/bin/linkicc",
+    "lprodump": "/usr/local/bin/lprodump",
+    "lrelease": "/usr/local/bin/lrelease",
+    "lrelease-pro": "/usr/local/bin/lrelease-pro",
+    "lupdate": "/usr/local/bin/lupdate",
+    "lupdate-pro": "/usr/local/bin/lupdate-pro",
+    "lz4": "/usr/local/bin/lz4",
+    "lz4c": "/usr/local/bin/lz4c",
+    "lz4cat": "/usr/local/bin/lz4cat",
+    "lzcat": "/usr/local/bin/lzcat",
+    "lzcmp": "/usr/local/bin/lzcmp",
+    "lzdiff": "/usr/local/bin/lzdiff",
+    "lzegrep": "/usr/local/bin/lzegrep",
+    "lzfgrep": "/usr/local/bin/lzfgrep",
+    "lzgrep": "/usr/local/bin/lzgrep",
+    "lzless": "/usr/local/bin/lzless",
+    "lzma": "/usr/local/bin/lzma",
+    "lzmadec": "/usr/local/bin/lzmadec",
+    "lzmainfo": "/usr/local/bin/lzmainfo",
+    "lzmore": "/usr/local/bin/lzmore",
+    "makeconv": "/usr/local/bin/makeconv",
+    "markdown-it": "/usr/local/bin/markdown-it",
+    "massdash": "/usr/local/bin/massdash",
+    "mckey": "/usr/local/bin/mckey",
+    "meshdebug": "/usr/local/bin/meshdebug",
+    "metaflac": "/usr/local/bin/metaflac",
+    "moc": "/usr/local/bin/moc",
+    "mpg123": "/usr/local/bin/mpg123",
+    "mpg123-id3dump": "/usr/local/bin/mpg123-id3dump",
+    "mpg123-strip": "/usr/local/bin/mpg123-strip",
+    "mpicalc": "/usr/local/bin/mpicalc",
+    "mqtt5_app": "/usr/local/bin/mqtt5_app",
+    "mqtt5_canary": "/usr/local/bin/mqtt5_canary",
+    "mqtt5canary": "/usr/local/bin/mqtt5canary",
+    "msgattrib": "/usr/local/bin/msgattrib",
+    "msgcat": "/usr/local/bin/msgcat",
+    "msgcmp": "/usr/local/bin/msgcmp",
+    "msgcomm": "/usr/local/bin/msgcomm",
+    "msgconv": "/usr/local/bin/msgconv",
+    "msgen": "/usr/local/bin/msgen",
+    "msgexec": "/usr/local/bin/msgexec",
+    "msgfilter": "/usr/local/bin/msgfilter",
+    "msgfmt": "/usr/local/bin/msgfmt",
+    "msggrep": "/usr/local/bin/msggrep",
+    "msginit": "/usr/local/bin/msginit",
+    "msgmerge": "/usr/local/bin/msgmerge",
+    "msgunfmt": "/usr/local/bin/msgunfmt",
+    "msguniq": "/usr/local/bin/msguniq",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "nf-ct-add": "/usr/local/bin/nf-ct-add",
+    "nf-ct-events": "/usr/local/bin/nf-ct-events",
+    "nf-ct-list": "/usr/local/bin/nf-ct-list",
+    "nf-exp-add": "/usr/local/bin/nf-exp-add",
+    "nf-exp-delete": "/usr/local/bin/nf-exp-delete",
+    "nf-exp-list": "/usr/local/bin/nf-exp-list",
+    "nf-log": "/usr/local/bin/nf-log",
+    "nf-monitor": "/usr/local/bin/nf-monitor",
+    "nf-queue": "/usr/local/bin/nf-queue",
+    "ngettext": "/usr/local/bin/ngettext",
+    "nghttp": "/usr/local/bin/nghttp",
+    "nghttpd": "/usr/local/bin/nghttpd",
+    "nghttpx": "/usr/local/bin/nghttpx",
+    "nl-addr-add": "/usr/local/bin/nl-addr-add",
+    "nl-addr-delete": "/usr/local/bin/nl-addr-delete",
+    "nl-addr-list": "/usr/local/bin/nl-addr-list",
+    "nl-class-add": "/usr/local/bin/nl-class-add",
+    "nl-class-delete": "/usr/local/bin/nl-class-delete",
+    "nl-class-list": "/usr/local/bin/nl-class-list",
+    "nl-classid-lookup": "/usr/local/bin/nl-classid-lookup",
+    "nl-cls-add": "/usr/local/bin/nl-cls-add",
+    "nl-cls-delete": "/usr/local/bin/nl-cls-delete",
+    "nl-cls-list": "/usr/local/bin/nl-cls-list",
+    "nl-fib-lookup": "/usr/local/bin/nl-fib-lookup",
+    "nl-link-enslave": "/usr/local/bin/nl-link-enslave",
+    "nl-link-ifindex2name": "/usr/local/bin/nl-link-ifindex2name",
+    "nl-link-list": "/usr/local/bin/nl-link-list",
+    "nl-link-name2ifindex": "/usr/local/bin/nl-link-name2ifindex",
+    "nl-link-release": "/usr/local/bin/nl-link-release",
+    "nl-link-set": "/usr/local/bin/nl-link-set",
+    "nl-link-stats": "/usr/local/bin/nl-link-stats",
+    "nl-list-caches": "/usr/local/bin/nl-list-caches",
+    "nl-list-sockets": "/usr/local/bin/nl-list-sockets",
+    "nl-monitor": "/usr/local/bin/nl-monitor",
+    "nl-neigh-add": "/usr/local/bin/nl-neigh-add",
+    "nl-neigh-delete": "/usr/local/bin/nl-neigh-delete",
+    "nl-neigh-list": "/usr/local/bin/nl-neigh-list",
+    "nl-neightbl-list": "/usr/local/bin/nl-neightbl-list",
+    "nl-nh-list": "/usr/local/bin/nl-nh-list",
+    "nl-pktloc-lookup": "/usr/local/bin/nl-pktloc-lookup",
+    "nl-qdisc-add": "/usr/local/bin/nl-qdisc-add",
+    "nl-qdisc-delete": "/usr/local/bin/nl-qdisc-delete",
+    "nl-qdisc-list": "/usr/local/bin/nl-qdisc-list",
+    "nl-route-add": "/usr/local/bin/nl-route-add",
+    "nl-route-delete": "/usr/local/bin/nl-route-delete",
+    "nl-route-get": "/usr/local/bin/nl-route-get",
+    "nl-route-list": "/usr/local/bin/nl-route-list",
+    "nl-rule-list": "/usr/local/bin/nl-rule-list",
+    "nl-tctree-list": "/usr/local/bin/nl-tctree-list",
+    "nl-util-addr": "/usr/local/bin/nl-util-addr",
+    "normalizer": "/usr/local/bin/normalizer",
+    "nspr-config": "/usr/local/bin/nspr-config",
+    "nss-config": "/usr/local/bin/nss-config",
+    "openssl": "/usr/local/bin/openssl",
+    "opj_compress": "/usr/local/bin/opj_compress",
+    "opj_decompress": "/usr/local/bin/opj_decompress",
+    "opj_dump": "/usr/local/bin/opj_dump",
+    "orc-contents": "/usr/local/bin/orc-contents",
+    "orc-memory": "/usr/local/bin/orc-memory",
+    "orc-metadata": "/usr/local/bin/orc-metadata",
+    "orc-scan": "/usr/local/bin/orc-scan",
+    "orc-statistics": "/usr/local/bin/orc-statistics",
+    "out123": "/usr/local/bin/out123",
+    "pa-info": "/usr/local/bin/pa-info",
+    "pacat": "/usr/local/bin/pacat",
+    "pactl": "/usr/local/bin/pactl",
+    "padsp": "/usr/local/bin/padsp",
+    "pamon": "/usr/local/bin/pamon",
+    "paplay": "/usr/local/bin/paplay",
+    "parec": "/usr/local/bin/parec",
+    "parecord": "/usr/local/bin/parecord",
+    "pcre2-config": "/usr/local/bin/pcre2-config",
+    "pcre2_jit_test": "/usr/local/bin/pcre2_jit_test",
+    "pcre2grep": "/usr/local/bin/pcre2grep",
+    "pcre2posix_test": "/usr/local/bin/pcre2posix_test",
+    "pcre2test": "/usr/local/bin/pcre2test",
+    "pg_config": "/usr/local/bin/pg_config",
+    "pip": "/usr/local/bin/pip",
+    "pip3": "/usr/local/bin/pip3",
+    "pixeltool": "/usr/local/bin/pixeltool",
+    "pk12util": "/usr/local/bin/pk12util",
+    "pkgdata": "/usr/local/bin/pkgdata",
+    "png-fix-itxt": "/usr/local/bin/png-fix-itxt",
+    "pngfix": "/usr/local/bin/pngfix",
+    "produce_x_platform_fuzz_corpus": "/usr/local/bin/produce_x_platform_fuzz_corpus",
+    "protoc": "/usr/local/bin/protoc",
+    "protoc-24.4.0": "/usr/local/bin/protoc-24.4.0",
+    "psicc": "/usr/local/bin/psicc",
+    "pydoc": "/usr/local/bin/pydoc",
+    "pydoc3": "/usr/local/bin/pydoc3",
+    "pydoc3.11": "/usr/local/bin/pydoc3.11",
+    "pyftmerge": "/usr/local/bin/pyftmerge",
+    "pyftsubset": "/usr/local/bin/pyftsubset",
+    "pygmentize": "/usr/local/bin/pygmentize",
+    "python": "/usr/local/bin/python",
+    "python3": "/usr/local/bin/python3",
+    "python3-config": "/usr/local/bin/python3-config",
+    "python3.1": "/usr/local/bin/python3.1",
+    "python3.11": "/usr/local/bin/python3.11",
+    "python3.11-config": "/usr/local/bin/python3.11-config",
+    "qcollectiongenerator": "/usr/local/bin/qcollectiongenerator",
+    "qdbus": "/usr/local/bin/qdbus",
+    "qdbuscpp2xml": "/usr/local/bin/qdbuscpp2xml",
+    "qdbusviewer": "/usr/local/bin/qdbusviewer",
+    "qdbusxml2cpp": "/usr/local/bin/qdbusxml2cpp",
+    "qdistancefieldgenerator": "/usr/local/bin/qdistancefieldgenerator",
+    "qdoc": "/usr/local/bin/qdoc",
+    "qgltf": "/usr/local/bin/qgltf",
+    "qhelpgenerator": "/usr/local/bin/qhelpgenerator",
+    "qlalr": "/usr/local/bin/qlalr",
+    "qmake": "/usr/local/bin/qmake",
+    "qml": "/usr/local/bin/qml",
+    "qmlcachegen": "/usr/local/bin/qmlcachegen",
+    "qmleasing": "/usr/local/bin/qmleasing",
+    "qmlformat": "/usr/local/bin/qmlformat",
+    "qmlimportscanner": "/usr/local/bin/qmlimportscanner",
+    "qmllint": "/usr/local/bin/qmllint",
+    "qmlmin": "/usr/local/bin/qmlmin",
+    "qmlplugindump": "/usr/local/bin/qmlplugindump",
+    "qmlpreview": "/usr/local/bin/qmlpreview",
+    "qmlprofiler": "/usr/local/bin/qmlprofiler",
+    "qmlscene": "/usr/local/bin/qmlscene",
+    "qmltestrunner": "/usr/local/bin/qmltestrunner",
+    "qmltime": "/usr/local/bin/qmltime",
+    "qmltyperegistrar": "/usr/local/bin/qmltyperegistrar",
+    "qscxmlc": "/usr/local/bin/qscxmlc",
+    "qt.conf": "/usr/local/bin/qt.conf",
+    "qtattributionsscanner": "/usr/local/bin/qtattributionsscanner",
+    "qtdiag": "/usr/local/bin/qtdiag",
+    "qtpaths": "/usr/local/bin/qtpaths",
+    "qtplugininfo": "/usr/local/bin/qtplugininfo",
+    "qvkgen": "/usr/local/bin/qvkgen",
+    "rcc": "/usr/local/bin/rcc",
+    "rcopy": "/usr/local/bin/rcopy",
+    "rdjpgcom": "/usr/local/bin/rdjpgcom",
+    "rdma_client": "/usr/local/bin/rdma_client",
+    "rdma_server": "/usr/local/bin/rdma_server",
+    "rdma_xclient": "/usr/local/bin/rdma_xclient",
+    "rdma_xserver": "/usr/local/bin/rdma_xserver",
+    "recode-sr-latin": "/usr/local/bin/recode-sr-latin",
+    "repc": "/usr/local/bin/repc",
+    "reset": "/usr/local/bin/reset",
+    "riostream": "/usr/local/bin/riostream",
+    "rping": "/usr/local/bin/rping",
+    "rstream": "/usr/local/bin/rstream",
+    "run_x_platform_fuzz_corpus": "/usr/local/bin/run_x_platform_fuzz_corpus",
+    "sclient": "/usr/local/bin/sclient",
+    "setfattr": "/usr/local/bin/setfattr",
+    "sha256_profile": "/usr/local/bin/sha256_profile",
+    "sim_client": "/usr/local/bin/sim_client",
+    "sndfile-cmp": "/usr/local/bin/sndfile-cmp",
+    "sndfile-concat": "/usr/local/bin/sndfile-concat",
+    "sndfile-convert": "/usr/local/bin/sndfile-convert",
+    "sndfile-deinterleave": "/usr/local/bin/sndfile-deinterleave",
+    "sndfile-info": "/usr/local/bin/sndfile-info",
+    "sndfile-interleave": "/usr/local/bin/sndfile-interleave",
+    "sndfile-metadata-get": "/usr/local/bin/sndfile-metadata-get",
+    "sndfile-metadata-set": "/usr/local/bin/sndfile-metadata-set",
+    "sndfile-play": "/usr/local/bin/sndfile-play",
+    "sndfile-salvage": "/usr/local/bin/sndfile-salvage",
+    "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
+    "streamlit": "/usr/local/bin/streamlit",
+    "streamlit.cmd": "/usr/local/bin/streamlit.cmd",
+    "svm-predict": "/usr/local/bin/svm-predict",
+    "svm-scale": "/usr/local/bin/svm-scale",
+    "svm-train": "/usr/local/bin/svm-train",
+    "syncqt.pl": "/usr/local/bin/syncqt.pl",
+    "tabs": "/usr/local/bin/tabs",
+    "tclsh": "/usr/local/bin/tclsh",
+    "tclsh8.6": "/usr/local/bin/tclsh8.6",
+    "tic": "/usr/local/bin/tic",
+    "tiffcp": "/usr/local/bin/tiffcp",
+    "tiffdump": "/usr/local/bin/tiffdump",
+    "tiffinfo": "/usr/local/bin/tiffinfo",
+    "tiffset": "/usr/local/bin/tiffset",
+    "tiffsplit": "/usr/local/bin/tiffsplit",
+    "tificc": "/usr/local/bin/tificc",
+    "timezone-dump": "/usr/local/bin/timezone-dump",
+    "tjbench": "/usr/local/bin/tjbench",
+    "toe": "/usr/local/bin/toe",
+    "tput": "/usr/local/bin/tput",
+    "tqdm": "/usr/local/bin/tqdm",
+    "tracegen": "/usr/local/bin/tracegen",
+    "transicc": "/usr/local/bin/transicc",
+    "tset": "/usr/local/bin/tset",
+    "ttx": "/usr/local/bin/ttx",
+    "ucmatose": "/usr/local/bin/ucmatose",
+    "ucx_info": "/usr/local/bin/ucx_info",
+    "ucx_perftest": "/usr/local/bin/ucx_perftest",
+    "ucx_read_profile": "/usr/local/bin/ucx_read_profile",
+    "udaddy": "/usr/local/bin/udaddy",
+    "udpong": "/usr/local/bin/udpong",
+    "uic": "/usr/local/bin/uic",
+    "unlz4": "/usr/local/bin/unlz4",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unxz": "/usr/local/bin/unxz",
+    "unzstd": "/usr/local/bin/unzstd",
+    "uuclient": "/usr/local/bin/uuclient",
+    "watchmedo": "/usr/local/bin/watchmedo",
+    "wheel": "/usr/local/bin/wheel",
+    "wish": "/usr/local/bin/wish",
+    "wish8.6": "/usr/local/bin/wish8.6",
+    "wrjpgcom": "/usr/local/bin/wrjpgcom",
+    "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
+    "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
+    "xgettext": "/usr/local/bin/xgettext",
+    "xkbcli": "/usr/local/bin/xkbcli",
+    "xml2-config": "/usr/local/bin/xml2-config",
+    "xmlcatalog": "/usr/local/bin/xmlcatalog",
+    "xmllint": "/usr/local/bin/xmllint",
+    "xmlpatterns": "/usr/local/bin/xmlpatterns",
+    "xmlpatternsvalidator": "/usr/local/bin/xmlpatternsvalidator",
+    "xmlwf": "/usr/local/bin/xmlwf",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore",
+    "yat2m": "/usr/local/bin/yat2m",
+    "zstd": "/usr/local/bin/zstd",
+    "zstdcat": "/usr/local/bin/zstdcat",
+    "zstdgrep": "/usr/local/bin/zstdgrep",
+    "zstdless": "/usr/local/bin/zstdless",
+    "zstdmt": "/usr/local/bin/zstdmt",
+    "env-execute": "/usr/local/env-execute"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/m/mgatk:0.7.0--pyhdfd78af_0.json b/quay.io/biocontainers/m/mgatk:0.7.0--pyhdfd78af_0.json
new file mode 100644
index 0000000..ed2bfde
--- /dev/null
+++ b/quay.io/biocontainers/m/mgatk:0.7.0--pyhdfd78af_0.json
@@ -0,0 +1,335 @@
+{
+    "2to3": "/usr/local/bin/2to3",
+    "2to3-3.10": "/usr/local/bin/2to3-3.10",
+    "R": "/usr/local/bin/R",
+    "Rscript": "/usr/local/bin/Rscript",
+    "activate-global-python-argcomplete": "/usr/local/bin/activate-global-python-argcomplete",
+    "adig": "/usr/local/bin/adig",
+    "ahost": "/usr/local/bin/ahost",
+    "aserver": "/usr/local/bin/aserver",
+    "autopoint": "/usr/local/bin/autopoint",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "cairo-trace": "/usr/local/bin/cairo-trace",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "cbc": "/usr/local/bin/cbc",
+    "cjpeg": "/usr/local/bin/cjpeg",
+    "clear": "/usr/local/bin/clear",
+    "clp": "/usr/local/bin/clp",
+    "compile_et": "/usr/local/bin/compile_et",
+    "cups-config": "/usr/local/bin/cups-config",
+    "curl": "/usr/local/bin/curl",
+    "curl-config": "/usr/local/bin/curl-config",
+    "derb": "/usr/local/bin/derb",
+    "djpeg": "/usr/local/bin/djpeg",
+    "docutils": "/usr/local/bin/docutils",
+    "envsubst": "/usr/local/bin/envsubst",
+    "f2py": "/usr/local/bin/f2py",
+    "fc-cache": "/usr/local/bin/fc-cache",
+    "fc-cat": "/usr/local/bin/fc-cat",
+    "fc-conflist": "/usr/local/bin/fc-conflist",
+    "fc-list": "/usr/local/bin/fc-list",
+    "fc-match": "/usr/local/bin/fc-match",
+    "fc-pattern": "/usr/local/bin/fc-pattern",
+    "fc-query": "/usr/local/bin/fc-query",
+    "fc-scan": "/usr/local/bin/fc-scan",
+    "fc-validate": "/usr/local/bin/fc-validate",
+    "freetype-config": "/usr/local/bin/freetype-config",
+    "fribidi": "/usr/local/bin/fribidi",
+    "genbrk": "/usr/local/bin/genbrk",
+    "gencfu": "/usr/local/bin/gencfu",
+    "gencnval": "/usr/local/bin/gencnval",
+    "gendict": "/usr/local/bin/gendict",
+    "genrb": "/usr/local/bin/genrb",
+    "gettext": "/usr/local/bin/gettext",
+    "gettext.sh": "/usr/local/bin/gettext.sh",
+    "gettextize": "/usr/local/bin/gettextize",
+    "gif2rgb": "/usr/local/bin/gif2rgb",
+    "gifbuild": "/usr/local/bin/gifbuild",
+    "gifclrmp": "/usr/local/bin/gifclrmp",
+    "giffix": "/usr/local/bin/giffix",
+    "giftext": "/usr/local/bin/giftext",
+    "giftool": "/usr/local/bin/giftool",
+    "gss-client": "/usr/local/bin/gss-client",
+    "hb-info": "/usr/local/bin/hb-info",
+    "hb-ot-shape-closure": "/usr/local/bin/hb-ot-shape-closure",
+    "hb-shape": "/usr/local/bin/hb-shape",
+    "hb-subset": "/usr/local/bin/hb-subset",
+    "hb-view": "/usr/local/bin/hb-view",
+    "humanfriendly": "/usr/local/bin/humanfriendly",
+    "icu-config": "/usr/local/bin/icu-config",
+    "icuexportdata": "/usr/local/bin/icuexportdata",
+    "icuinfo": "/usr/local/bin/icuinfo",
+    "idle3": "/usr/local/bin/idle3",
+    "idle3.10": "/usr/local/bin/idle3.10",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "installBiocDataPackage.sh": "/usr/local/bin/installBiocDataPackage.sh",
+    "ippeveprinter": "/usr/local/bin/ippeveprinter",
+    "ipptool": "/usr/local/bin/ipptool",
+    "jar": "/usr/local/bin/jar",
+    "jarsigner": "/usr/local/bin/jarsigner",
+    "java": "/usr/local/bin/java",
+    "javac": "/usr/local/bin/javac",
+    "javadoc": "/usr/local/bin/javadoc",
+    "javap": "/usr/local/bin/javap",
+    "jcmd": "/usr/local/bin/jcmd",
+    "jconsole": "/usr/local/bin/jconsole",
+    "jdb": "/usr/local/bin/jdb",
+    "jdeprscan": "/usr/local/bin/jdeprscan",
+    "jdeps": "/usr/local/bin/jdeps",
+    "jfr": "/usr/local/bin/jfr",
+    "jhsdb": "/usr/local/bin/jhsdb",
+    "jimage": "/usr/local/bin/jimage",
+    "jinfo": "/usr/local/bin/jinfo",
+    "jlink": "/usr/local/bin/jlink",
+    "jmap": "/usr/local/bin/jmap",
+    "jmod": "/usr/local/bin/jmod",
+    "jpackage": "/usr/local/bin/jpackage",
+    "jpegtran": "/usr/local/bin/jpegtran",
+    "jpgicc": "/usr/local/bin/jpgicc",
+    "jps": "/usr/local/bin/jps",
+    "jq": "/usr/local/bin/jq",
+    "jrunscript": "/usr/local/bin/jrunscript",
+    "jshell": "/usr/local/bin/jshell",
+    "jsonschema": "/usr/local/bin/jsonschema",
+    "jstack": "/usr/local/bin/jstack",
+    "jstat": "/usr/local/bin/jstat",
+    "jstatd": "/usr/local/bin/jstatd",
+    "jupyter": "/usr/local/bin/jupyter",
+    "jupyter-migrate": "/usr/local/bin/jupyter-migrate",
+    "jupyter-troubleshoot": "/usr/local/bin/jupyter-troubleshoot",
+    "jupyter-trust": "/usr/local/bin/jupyter-trust",
+    "jwebserver": "/usr/local/bin/jwebserver",
+    "k5srvutil": "/usr/local/bin/k5srvutil",
+    "kadmin": "/usr/local/bin/kadmin",
+    "kdestroy": "/usr/local/bin/kdestroy",
+    "keyctl": "/usr/local/bin/keyctl",
+    "keytool": "/usr/local/bin/keytool",
+    "kinit": "/usr/local/bin/kinit",
+    "klist": "/usr/local/bin/klist",
+    "kpasswd": "/usr/local/bin/kpasswd",
+    "krb5-config": "/usr/local/bin/krb5-config",
+    "ksu": "/usr/local/bin/ksu",
+    "kswitch": "/usr/local/bin/kswitch",
+    "ktutil": "/usr/local/bin/ktutil",
+    "kvno": "/usr/local/bin/kvno",
+    "libdeflate-gunzip": "/usr/local/bin/libdeflate-gunzip",
+    "libdeflate-gzip": "/usr/local/bin/libdeflate-gzip",
+    "libpng-config": "/usr/local/bin/libpng-config",
+    "libpng16-config": "/usr/local/bin/libpng16-config",
+    "linkicc": "/usr/local/bin/linkicc",
+    "lzcat": "/usr/local/bin/lzcat",
+    "lzcmp": "/usr/local/bin/lzcmp",
+    "lzdiff": "/usr/local/bin/lzdiff",
+    "lzegrep": "/usr/local/bin/lzegrep",
+    "lzfgrep": "/usr/local/bin/lzfgrep",
+    "lzgrep": "/usr/local/bin/lzgrep",
+    "lzless": "/usr/local/bin/lzless",
+    "lzma": "/usr/local/bin/lzma",
+    "lzmadec": "/usr/local/bin/lzmadec",
+    "lzmainfo": "/usr/local/bin/lzmainfo",
+    "lzmore": "/usr/local/bin/lzmore",
+    "make": "/usr/local/bin/make",
+    "makeconv": "/usr/local/bin/makeconv",
+    "mgatk": "/usr/local/bin/mgatk",
+    "mgatk-del": "/usr/local/bin/mgatk-del",
+    "mgatk-del-find": "/usr/local/bin/mgatk-del-find",
+    "msgattrib": "/usr/local/bin/msgattrib",
+    "msgcat": "/usr/local/bin/msgcat",
+    "msgcmp": "/usr/local/bin/msgcmp",
+    "msgcomm": "/usr/local/bin/msgcomm",
+    "msgconv": "/usr/local/bin/msgconv",
+    "msgen": "/usr/local/bin/msgen",
+    "msgexec": "/usr/local/bin/msgexec",
+    "msgfilter": "/usr/local/bin/msgfilter",
+    "msgfmt": "/usr/local/bin/msgfmt",
+    "msggrep": "/usr/local/bin/msggrep",
+    "msginit": "/usr/local/bin/msginit",
+    "msgmerge": "/usr/local/bin/msgmerge",
+    "msgunfmt": "/usr/local/bin/msgunfmt",
+    "msguniq": "/usr/local/bin/msguniq",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "ngettext": "/usr/local/bin/ngettext",
+    "nghttp": "/usr/local/bin/nghttp",
+    "nghttpd": "/usr/local/bin/nghttpd",
+    "nghttpx": "/usr/local/bin/nghttpx",
+    "normalizer": "/usr/local/bin/normalizer",
+    "onig-config": "/usr/local/bin/onig-config",
+    "openssl": "/usr/local/bin/openssl",
+    "pango-list": "/usr/local/bin/pango-list",
+    "pango-segmentation": "/usr/local/bin/pango-segmentation",
+    "pango-view": "/usr/local/bin/pango-view",
+    "pcre2-config": "/usr/local/bin/pcre2-config",
+    "pcre2_jit_test": "/usr/local/bin/pcre2_jit_test",
+    "pcre2grep": "/usr/local/bin/pcre2grep",
+    "pcre2test": "/usr/local/bin/pcre2test",
+    "picard": "/usr/local/bin/picard",
+    "pip": "/usr/local/bin/pip",
+    "pip3": "/usr/local/bin/pip3",
+    "pkgdata": "/usr/local/bin/pkgdata",
+    "plac_runner.py": "/usr/local/bin/plac_runner.py",
+    "png-fix-itxt": "/usr/local/bin/png-fix-itxt",
+    "pngfix": "/usr/local/bin/pngfix",
+    "psicc": "/usr/local/bin/psicc",
+    "pulptest": "/usr/local/bin/pulptest",
+    "py.test": "/usr/local/bin/py.test",
+    "pydoc": "/usr/local/bin/pydoc",
+    "pydoc3": "/usr/local/bin/pydoc3",
+    "pydoc3.10": "/usr/local/bin/pydoc3.10",
+    "pytest": "/usr/local/bin/pytest",
+    "python": "/usr/local/bin/python",
+    "python-argcomplete-check-easy-install-script": "/usr/local/bin/python-argcomplete-check-easy-install-script",
+    "python3": "/usr/local/bin/python3",
+    "python3-config": "/usr/local/bin/python3-config",
+    "python3.1": "/usr/local/bin/python3.1",
+    "python3.10": "/usr/local/bin/python3.10",
+    "python3.10-config": "/usr/local/bin/python3.10-config",
+    "rdjpgcom": "/usr/local/bin/rdjpgcom",
+    "recode-sr-latin": "/usr/local/bin/recode-sr-latin",
+    "register-python-argcomplete": "/usr/local/bin/register-python-argcomplete",
+    "reset": "/usr/local/bin/reset",
+    "rmiregistry": "/usr/local/bin/rmiregistry",
+    "rst2html.py": "/usr/local/bin/rst2html.py",
+    "rst2html4.py": "/usr/local/bin/rst2html4.py",
+    "rst2html5.py": "/usr/local/bin/rst2html5.py",
+    "rst2latex.py": "/usr/local/bin/rst2latex.py",
+    "rst2man.py": "/usr/local/bin/rst2man.py",
+    "rst2odt.py": "/usr/local/bin/rst2odt.py",
+    "rst2odt_prepstyles.py": "/usr/local/bin/rst2odt_prepstyles.py",
+    "rst2pseudoxml.py": "/usr/local/bin/rst2pseudoxml.py",
+    "rst2s5.py": "/usr/local/bin/rst2s5.py",
+    "rst2xetex.py": "/usr/local/bin/rst2xetex.py",
+    "rst2xml.py": "/usr/local/bin/rst2xml.py",
+    "rstpep2html.py": "/usr/local/bin/rstpep2html.py",
+    "sclient": "/usr/local/bin/sclient",
+    "sed": "/usr/local/bin/sed",
+    "serialver": "/usr/local/bin/serialver",
+    "sim_client": "/usr/local/bin/sim_client",
+    "snakemake": "/usr/local/bin/snakemake",
+    "snakemake-bash-completion": "/usr/local/bin/snakemake-bash-completion",
+    "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
+    "tabs": "/usr/local/bin/tabs",
+    "tabulate": "/usr/local/bin/tabulate",
+    "tclsh": "/usr/local/bin/tclsh",
+    "tclsh8.6": "/usr/local/bin/tclsh8.6",
+    "tic": "/usr/local/bin/tic",
+    "tiffcp": "/usr/local/bin/tiffcp",
+    "tiffdump": "/usr/local/bin/tiffdump",
+    "tiffinfo": "/usr/local/bin/tiffinfo",
+    "tiffset": "/usr/local/bin/tiffset",
+    "tiffsplit": "/usr/local/bin/tiffsplit",
+    "tificc": "/usr/local/bin/tificc",
+    "tjbench": "/usr/local/bin/tjbench",
+    "toe": "/usr/local/bin/toe",
+    "tomlq": "/usr/local/bin/tomlq",
+    "tput": "/usr/local/bin/tput",
+    "transicc": "/usr/local/bin/transicc",
+    "tset": "/usr/local/bin/tset",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unxz": "/usr/local/bin/unxz",
+    "unzstd": "/usr/local/bin/unzstd",
+    "uuclient": "/usr/local/bin/uuclient",
+    "wheel": "/usr/local/bin/wheel",
+    "wish": "/usr/local/bin/wish",
+    "wish8.6": "/usr/local/bin/wish8.6",
+    "wrjpgcom": "/usr/local/bin/wrjpgcom",
+    "x86_64-conda-linux-gnu-addr2line": "/usr/local/bin/x86_64-conda-linux-gnu-addr2line",
+    "x86_64-conda-linux-gnu-ar": "/usr/local/bin/x86_64-conda-linux-gnu-ar",
+    "x86_64-conda-linux-gnu-as": "/usr/local/bin/x86_64-conda-linux-gnu-as",
+    "x86_64-conda-linux-gnu-c++": "/usr/local/bin/x86_64-conda-linux-gnu-c++",
+    "x86_64-conda-linux-gnu-c++filt": "/usr/local/bin/x86_64-conda-linux-gnu-c++filt",
+    "x86_64-conda-linux-gnu-c89": "/usr/local/bin/x86_64-conda-linux-gnu-c89",
+    "x86_64-conda-linux-gnu-c99": "/usr/local/bin/x86_64-conda-linux-gnu-c99",
+    "x86_64-conda-linux-gnu-cc": "/usr/local/bin/x86_64-conda-linux-gnu-cc",
+    "x86_64-conda-linux-gnu-cpp": "/usr/local/bin/x86_64-conda-linux-gnu-cpp",
+    "x86_64-conda-linux-gnu-dwp": "/usr/local/bin/x86_64-conda-linux-gnu-dwp",
+    "x86_64-conda-linux-gnu-elfedit": "/usr/local/bin/x86_64-conda-linux-gnu-elfedit",
+    "x86_64-conda-linux-gnu-f95": "/usr/local/bin/x86_64-conda-linux-gnu-f95",
+    "x86_64-conda-linux-gnu-g++": "/usr/local/bin/x86_64-conda-linux-gnu-g++",
+    "x86_64-conda-linux-gnu-gcc": "/usr/local/bin/x86_64-conda-linux-gnu-gcc",
+    "x86_64-conda-linux-gnu-gcc-ar": "/usr/local/bin/x86_64-conda-linux-gnu-gcc-ar",
+    "x86_64-conda-linux-gnu-gcc-nm": "/usr/local/bin/x86_64-conda-linux-gnu-gcc-nm",
+    "x86_64-conda-linux-gnu-gcc-ranlib": "/usr/local/bin/x86_64-conda-linux-gnu-gcc-ranlib",
+    "x86_64-conda-linux-gnu-gcov": "/usr/local/bin/x86_64-conda-linux-gnu-gcov",
+    "x86_64-conda-linux-gnu-gcov-dump": "/usr/local/bin/x86_64-conda-linux-gnu-gcov-dump",
+    "x86_64-conda-linux-gnu-gcov-tool": "/usr/local/bin/x86_64-conda-linux-gnu-gcov-tool",
+    "x86_64-conda-linux-gnu-gfortran": "/usr/local/bin/x86_64-conda-linux-gnu-gfortran",
+    "x86_64-conda-linux-gnu-gprof": "/usr/local/bin/x86_64-conda-linux-gnu-gprof",
+    "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
+    "x86_64-conda-linux-gnu-ld.bfd": "/usr/local/bin/x86_64-conda-linux-gnu-ld.bfd",
+    "x86_64-conda-linux-gnu-ld.gold": "/usr/local/bin/x86_64-conda-linux-gnu-ld.gold",
+    "x86_64-conda-linux-gnu-nm": "/usr/local/bin/x86_64-conda-linux-gnu-nm",
+    "x86_64-conda-linux-gnu-objcopy": "/usr/local/bin/x86_64-conda-linux-gnu-objcopy",
+    "x86_64-conda-linux-gnu-objdump": "/usr/local/bin/x86_64-conda-linux-gnu-objdump",
+    "x86_64-conda-linux-gnu-ranlib": "/usr/local/bin/x86_64-conda-linux-gnu-ranlib",
+    "x86_64-conda-linux-gnu-readelf": "/usr/local/bin/x86_64-conda-linux-gnu-readelf",
+    "x86_64-conda-linux-gnu-size": "/usr/local/bin/x86_64-conda-linux-gnu-size",
+    "x86_64-conda-linux-gnu-strings": "/usr/local/bin/x86_64-conda-linux-gnu-strings",
+    "x86_64-conda-linux-gnu-strip": "/usr/local/bin/x86_64-conda-linux-gnu-strip",
+    "x86_64-conda_cos6-linux-gnu-addr2line": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-addr2line",
+    "x86_64-conda_cos6-linux-gnu-ar": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ar",
+    "x86_64-conda_cos6-linux-gnu-as": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-as",
+    "x86_64-conda_cos6-linux-gnu-c++": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c++",
+    "x86_64-conda_cos6-linux-gnu-c++filt": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c++filt",
+    "x86_64-conda_cos6-linux-gnu-c89": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c89",
+    "x86_64-conda_cos6-linux-gnu-c99": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c99",
+    "x86_64-conda_cos6-linux-gnu-cc": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-cc",
+    "x86_64-conda_cos6-linux-gnu-cpp": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-cpp",
+    "x86_64-conda_cos6-linux-gnu-dwp": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-dwp",
+    "x86_64-conda_cos6-linux-gnu-elfedit": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-elfedit",
+    "x86_64-conda_cos6-linux-gnu-f95": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-f95",
+    "x86_64-conda_cos6-linux-gnu-g++": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-g++",
+    "x86_64-conda_cos6-linux-gnu-gcc": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc",
+    "x86_64-conda_cos6-linux-gnu-gcc-ar": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc-ar",
+    "x86_64-conda_cos6-linux-gnu-gcc-nm": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc-nm",
+    "x86_64-conda_cos6-linux-gnu-gcc-ranlib": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc-ranlib",
+    "x86_64-conda_cos6-linux-gnu-gcov": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcov",
+    "x86_64-conda_cos6-linux-gnu-gcov-dump": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcov-dump",
+    "x86_64-conda_cos6-linux-gnu-gcov-tool": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcov-tool",
+    "x86_64-conda_cos6-linux-gnu-gfortran": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gfortran",
+    "x86_64-conda_cos6-linux-gnu-gprof": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gprof",
+    "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
+    "x86_64-conda_cos6-linux-gnu-ld.bfd": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld.bfd",
+    "x86_64-conda_cos6-linux-gnu-ld.gold": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld.gold",
+    "x86_64-conda_cos6-linux-gnu-nm": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-nm",
+    "x86_64-conda_cos6-linux-gnu-objcopy": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-objcopy",
+    "x86_64-conda_cos6-linux-gnu-objdump": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-objdump",
+    "x86_64-conda_cos6-linux-gnu-ranlib": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ranlib",
+    "x86_64-conda_cos6-linux-gnu-readelf": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-readelf",
+    "x86_64-conda_cos6-linux-gnu-size": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-size",
+    "x86_64-conda_cos6-linux-gnu-strings": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-strings",
+    "x86_64-conda_cos6-linux-gnu-strip": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-strip",
+    "xgettext": "/usr/local/bin/xgettext",
+    "xmlwf": "/usr/local/bin/xmlwf",
+    "xq": "/usr/local/bin/xq",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore",
+    "yq": "/usr/local/bin/yq",
+    "yte": "/usr/local/bin/yte",
+    "zstd": "/usr/local/bin/zstd",
+    "zstdcat": "/usr/local/bin/zstdcat",
+    "zstdgrep": "/usr/local/bin/zstdgrep",
+    "zstdless": "/usr/local/bin/zstdless",
+    "zstdmt": "/usr/local/bin/zstdmt",
+    "env-execute": "/usr/local/env-execute"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/t/tntblast:2.61--hdcf5f25_0.json b/quay.io/biocontainers/t/tntblast:2.61--hdcf5f25_0.json
new file mode 100644
index 0000000..57ad59b
--- /dev/null
+++ b/quay.io/biocontainers/t/tntblast:2.61--hdcf5f25_0.json
@@ -0,0 +1,4 @@
+{
+    "tntblast": "/usr/local/bin/tntblast",
+    "env-execute": "/usr/local/env-execute"
+}
\ No newline at end of file
diff --git a/skips.json b/skips.json
index 2be271f..b3aedeb 100644
--- a/skips.json
+++ b/skips.json
@@ -126,6 +126,7 @@
     "quay.io/biocontainers/bioconductor-moonlightr",
     "quay.io/biocontainers/bioconductor-rchyoptimyx",
     "quay.io/biocontainers/bioconductor-ttmap",
+    "quay.io/biocontainers/bioformats2raw",
     "quay.io/biocontainers/blat",
     "quay.io/biocontainers/bx-python",
     "quay.io/biocontainers/byobu",