diff --git a/counts.json b/counts.json
index 728c5fb..4ff8dcb 100644
--- a/counts.json
+++ b/counts.json
@@ -2326,10 +2326,10 @@
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@@ -20983,7 +20988,7 @@
     "pytest": 151,
     "pytest-benchmark": 1,
     "pythia8-config": 1,
-    "python": 3773,
+    "python": 3776,
     "python-argcomplete-check-easy-install-script": 346,
     "python-argcomplete-tcsh": 191,
     "python-build": 2,
@@ -20994,15 +20999,15 @@
     "python2.5-config": 1,
     "python2.7": 331,
     "python2.7-config": 314,
-    "python3": 3442,
-    "python3-config": 3441,
-    "python3.1": 1371,
+    "python3": 3445,
+    "python3-config": 3444,
+    "python3.1": 1374,
     "python3.10": 826,
     "python3.10-config": 826,
     "python3.11": 278,
     "python3.11-config": 278,
-    "python3.12": 267,
-    "python3.12-config": 267,
+    "python3.12": 270,
+    "python3.12-config": 270,
     "python3.4": 6,
     "python3.4-config": 6,
     "python3.4m": 6,
@@ -21875,7 +21880,7 @@
     "rescue_fusion.py": 1,
     "reseq": 1,
     "reseq-prepare-names.py": 1,
-    "reset": 7828,
+    "reset": 7831,
     "resetFragLibrary": 2,
     "reset_array.pl": 1,
     "reset_experiment.pl": 1,
@@ -21983,7 +21988,7 @@
     "ribotin-ref": 1,
     "ribotin-verkko": 1,
     "ribotish": 1,
-    "rich-click": 19,
+    "rich-click": 20,
     "rigid_body": 1,
     "riostream": 24,
     "ripcal": 1,
@@ -22367,6 +22372,7 @@
     "run_commands.py": 1,
     "run_dbcan": 2,
     "run_dbcan.py": 1,
+    "run_dbghaplo_pipeline": 1,
     "run_difcover.sh": 1,
     "run_discoSnp++.sh": 1,
     "run_discoSnp++_ML.sh": 1,
@@ -22599,7 +22605,7 @@
     "sam2starch-float128": 15,
     "sam2starch-megarow": 15,
     "sam2starch-typical": 15,
-    "sam2vcf.pl": 528,
+    "sam2vcf.pl": 529,
     "samFLAGinfo.pl": 1,
     "samFilter": 1,
     "samMap.pl": 15,
@@ -22659,8 +22665,8 @@
     "samtoh5": 1,
     "samtom4": 1,
     "samtom5_dir": 1,
-    "samtools": 553,
-    "samtools.pl": 528,
+    "samtools": 554,
+    "samtools.pl": 529,
     "samtools_0.1.18": 3,
     "samtools_mpileup_to_var": 1,
     "samtoroc.sh": 31,
@@ -22855,7 +22861,7 @@
     "scitokens-test": 1,
     "scitokens-test-access": 1,
     "scitokens-verify": 1,
-    "sclient": 5878,
+    "sclient": 5879,
     "sclust_summary.sh": 1,
     "scluster": 3,
     "scmap-cli-post-install-tests.bats": 1,
@@ -23083,7 +23089,7 @@
     "seq2onehot": 1,
     "seq2profile.pl": 5,
     "seq2science": 2,
-    "seq_cache_populate.pl": 528,
+    "seq_cache_populate.pl": 529,
     "seq_count": 2,
     "seq_diff": 1,
     "seq_download.py": 2,
@@ -23380,7 +23386,7 @@
     "sim-cover2": 2,
     "sim-shotgun": 2,
     "sim4db": 3,
-    "sim_client": 5878,
+    "sim_client": 5879,
     "sim_reads": 10,
     "sim_reads.o": 10,
     "sim_reads_tran": 10,
@@ -23480,6 +23486,9 @@
     "sixgill_merge": 1,
     "sixpack": 26,
     "size": 8,
+    "sizemeup": 1,
+    "sizemeup-build": 1,
+    "sizemeup-main": 1,
     "sizesToScaff.pl": 1,
     "sizeseq": 26,
     "sj_visualizer.pl": 1,
@@ -23674,7 +23683,7 @@
     "snver-pool": 1,
     "soap": 2,
     "soap.coverage": 2,
-    "soap2sam.pl": 528,
+    "soap2sam.pl": 529,
     "soapcpp2": 1,
     "soapsplice": 1,
     "soapsuds": 15,
@@ -23964,7 +23973,7 @@
     "sqlformat": 9,
     "sqlite.pl": 1,
     "sqlite3": 2720,
-    "sqlite3_analyzer": 7222,
+    "sqlite3_analyzer": 7225,
     "sqlitebrowser": 1,
     "sqlmetal": 15,
     "sqlsharp": 15,
@@ -24585,7 +24594,7 @@
     "tab2krona.py": 1,
     "tab2mapper.pl": 1,
     "tab2ovls": 2,
-    "tabix": 725,
+    "tabix": 726,
     "tabix++": 23,
     "table2asn": 3,
     "table_add_column.py": 60,
@@ -24594,7 +24603,7 @@
     "tableproxy64": 1,
     "tableschema": 1,
     "tablet": 1,
-    "tabs": 7828,
+    "tabs": 7831,
     "tabulate": 139,
     "tabulate.py": 1,
     "tabulator": 1,
@@ -24768,9 +24777,9 @@
     "tbvcfreport": 1,
     "tcdemux": 1,
     "tcfinder": 1,
-    "tclsh": 7459,
+    "tclsh": 7462,
     "tclsh8.5": 473,
-    "tclsh8.6": 7222,
+    "tclsh8.6": 7225,
     "tcode": 26,
     "tcsh": 3,
     "td_bignet": 2,
@@ -24973,7 +24982,7 @@
     "tiara-test": 2,
     "tiberius": 1,
     "tiberius.py": 1,
-    "tic": 7828,
+    "tic": 7831,
     "tiddit": 1,
     "tides": 1,
     "tidk": 1,
@@ -25082,7 +25091,7 @@
     "to_upper_case.pl.bak": 1,
     "toco": 80,
     "toco_from_protos": 80,
-    "toe": 7828,
+    "toe": 7831,
     "tohnsw": 1,
     "toil": 3,
     "toil-cwl-runner": 3,
@@ -25134,8 +25143,8 @@
     "tpp_hostname": 2,
     "tpp_models.pl": 2,
     "tpptray.bat": 2,
-    "tput": 7828,
-    "tqdm": 380,
+    "tput": 7831,
+    "tqdm": 381,
     "tr": 85,
     "tr-trimmer": 1,
     "trace_comment": 2,
@@ -25365,7 +25374,7 @@
     "tryptic.py": 1,
     "ts": 3,
     "tsebra.py": 3,
-    "tset": 7828,
+    "tset": 7831,
     "tskit": 7,
     "tsort": 85,
     "tsp": 2,
@@ -25545,7 +25554,7 @@
     "unix2mac": 2,
     "unlink": 85,
     "unlz4": 3535,
-    "unlzma": 7655,
+    "unlzma": 7658,
     "unmapped2anchors.py": 1,
     "unmerge": 1,
     "unmerge-paired-reads.sh": 2,
@@ -25563,7 +25572,7 @@
     "unstarch-typical": 15,
     "untangle": 2,
     "unweight_fasta.py": 1,
-    "unxz": 7880,
+    "unxz": 7883,
     "unzip": 32,
     "unzip.sh": 30,
     "unziphdf5": 1,
@@ -25571,7 +25580,7 @@
     "unzipont": 1,
     "unzipont_dir": 1,
     "unzipsfx": 25,
-    "unzstd": 5295,
+    "unzstd": 5298,
     "update-blastdb.py": 2,
     "update-serotypefinder-db": 1,
     "update-sort-bed-migrate-candidates": 15,
@@ -25645,7 +25654,7 @@
     "utmpdump": 13,
     "utrgff2gbrowse.pl": 15,
     "utrrnaseq": 13,
-    "uuclient": 5878,
+    "uuclient": 5879,
     "uuid": 38,
     "uuid-config": 38,
     "uuidgen": 13,
@@ -26346,12 +26355,12 @@
     "wgetdir": 1,
     "wgmlst": 1,
     "wgs2ncbi": 1,
-    "wgsim": 529,
-    "wgsim_eval.pl": 529,
+    "wgsim": 530,
+    "wgsim_eval.pl": 530,
     "wham": 1,
     "whamg": 1,
     "whatshap": 14,
-    "wheel": 3770,
+    "wheel": 3773,
     "wheezy.template": 2,
     "whereis": 13,
     "which": 1,
@@ -26396,9 +26405,9 @@
     "winnowmap": 3,
     "wiq.py": 1,
     "wisestork": 1,
-    "wish": 7459,
+    "wish": 7462,
     "wish8.5": 473,
-    "wish8.6": 7222,
+    "wish8.6": 7225,
     "wkhtmltoimage": 2,
     "wkhtmltopdf": 2,
     "wlmscpfs": 1,
@@ -26441,6 +26450,7 @@
     "writeResultsPage.pl": 15,
     "write_QC_report.Rmd": 1,
     "write_barcode_file.py": 1,
+    "write_contig_headers_vcf.py": 1,
     "write_fasta_from_gff.py": 2,
     "write_hierarchy.py": 1,
     "write_report.Rmd": 1,
@@ -26514,7 +26524,7 @@
     "x86_64-conda-linux-gnu-gfortran": 3356,
     "x86_64-conda-linux-gnu-gfortran.bin": 575,
     "x86_64-conda-linux-gnu-gprof": 3394,
-    "x86_64-conda-linux-gnu-ld": 5611,
+    "x86_64-conda-linux-gnu-ld": 5614,
     "x86_64-conda-linux-gnu-ld.bfd": 3394,
     "x86_64-conda-linux-gnu-ld.gold": 3394,
     "x86_64-conda-linux-gnu-nm": 3394,
@@ -26550,7 +26560,7 @@
     "x86_64-conda_cos6-linux-gnu-gfortran": 4125,
     "x86_64-conda_cos6-linux-gnu-gfortran.bin": 1344,
     "x86_64-conda_cos6-linux-gnu-gprof": 4161,
-    "x86_64-conda_cos6-linux-gnu-ld": 6445,
+    "x86_64-conda_cos6-linux-gnu-ld": 6448,
     "x86_64-conda_cos6-linux-gnu-ld.bfd": 4161,
     "x86_64-conda_cos6-linux-gnu-ld.gold": 4161,
     "x86_64-conda_cos6-linux-gnu-nm": 4161,
@@ -26603,7 +26613,7 @@
     "xmfa2maf": 4,
     "xmfa2maf.pl": 1,
     "xml": 1,
-    "xml2-config": 5431,
+    "xml2-config": 5432,
     "xml2-config.bak": 34,
     "xml2dcm": 1,
     "xml2dsr": 1,
@@ -26616,10 +26626,10 @@
     "xml_spellcheck": 64,
     "xml_split": 64,
     "xml_to_bas.pl": 3,
-    "xmlcatalog": 5431,
+    "xmlcatalog": 5432,
     "xmlget": 22,
     "xmlindent": 1,
-    "xmllint": 5431,
+    "xmllint": 5432,
     "xmlpatterns": 254,
     "xmlpatterns-qt4": 3,
     "xmlpatternsvalidator": 254,
@@ -26656,8 +26666,8 @@
     "xrootd-config": 1,
     "xrspatial": 2,
     "xsd": 17,
-    "xslt-config": 265,
-    "xsltproc": 265,
+    "xslt-config": 266,
+    "xsltproc": 266,
     "xsltproc_lite": 7,
     "xstreme": 2,
     "xstreme_html_to_tsv": 2,
@@ -26684,16 +26694,16 @@
     "xy-plot": 88,
     "xyalign": 1,
     "xyz_sfetch": 1,
-    "xz": 7880,
-    "xzcat": 7655,
-    "xzcmp": 7655,
-    "xzdec": 7655,
-    "xzdiff": 7655,
-    "xzegrep": 7655,
-    "xzfgrep": 7655,
-    "xzgrep": 7655,
-    "xzless": 7655,
-    "xzmore": 7655,
+    "xz": 7883,
+    "xzcat": 7658,
+    "xzcmp": 7658,
+    "xzdec": 7658,
+    "xzdiff": 7658,
+    "xzegrep": 7658,
+    "xzfgrep": 7658,
+    "xzgrep": 7658,
+    "xzless": 7658,
+    "xzmore": 7658,
     "y2racc": 7,
     "yacc": 4,
     "yacht": 1,
@@ -26770,7 +26780,7 @@
     "znew": 20,
     "zol": 2,
     "zoom": 1,
-    "zoom2sam.pl": 528,
+    "zoom2sam.pl": 529,
     "zopfli": 26,
     "zopflipng": 26,
     "zorro": 1,
@@ -26780,10 +26790,10 @@
     "zrun": 3,
     "zsh": 3,
     "zsh-5.8": 3,
-    "zstd": 5295,
-    "zstdcat": 5295,
-    "zstdgrep": 5093,
-    "zstdless": 5093,
-    "zstdmt": 5295,
+    "zstd": 5298,
+    "zstdcat": 5298,
+    "zstdgrep": 5096,
+    "zstdless": 5096,
+    "zstdmt": 5298,
     "ztr_dump": 2
 }
\ No newline at end of file
diff --git a/quay.io/biocontainers/d/dbghaplo:0.0.2--h919a2d8_0.json b/quay.io/biocontainers/d/dbghaplo:0.0.2--h919a2d8_0.json
new file mode 100644
index 0000000..6a59265
--- /dev/null
+++ b/quay.io/biocontainers/d/dbghaplo:0.0.2--h919a2d8_0.json
@@ -0,0 +1,140 @@
+{
+    "2to3": "/usr/local/bin/2to3",
+    "2to3-3.12": "/usr/local/bin/2to3-3.12",
+    "ace2sam": "/usr/local/bin/ace2sam",
+    "adig": "/usr/local/bin/adig",
+    "ahost": "/usr/local/bin/ahost",
+    "annot-tsv": "/usr/local/bin/annot-tsv",
+    "bgzip": "/usr/local/bin/bgzip",
+    "blast2sam.pl": "/usr/local/bin/blast2sam.pl",
+    "bowtie2sam.pl": "/usr/local/bin/bowtie2sam.pl",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "clear": "/usr/local/bin/clear",
+    "compile_et": "/usr/local/bin/compile_et",
+    "curl-config": "/usr/local/bin/curl-config",
+    "dbghaplo": "/usr/local/bin/dbghaplo",
+    "export2sam.pl": "/usr/local/bin/export2sam.pl",
+    "fasta-sanitize.pl": "/usr/local/bin/fasta-sanitize.pl",
+    "gss-client": "/usr/local/bin/gss-client",
+    "haplotag_bam": "/usr/local/bin/haplotag_bam",
+    "htsfile": "/usr/local/bin/htsfile",
+    "idle3": "/usr/local/bin/idle3",
+    "idle3.12": "/usr/local/bin/idle3.12",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "interpolate_sam.pl": "/usr/local/bin/interpolate_sam.pl",
+    "k5srvutil": "/usr/local/bin/k5srvutil",
+    "kadmin": "/usr/local/bin/kadmin",
+    "kdestroy": "/usr/local/bin/kdestroy",
+    "keyctl": "/usr/local/bin/keyctl",
+    "kinit": "/usr/local/bin/kinit",
+    "klist": "/usr/local/bin/klist",
+    "kpasswd": "/usr/local/bin/kpasswd",
+    "krb5-config": "/usr/local/bin/krb5-config",
+    "ksu": "/usr/local/bin/ksu",
+    "kswitch": "/usr/local/bin/kswitch",
+    "ktutil": "/usr/local/bin/ktutil",
+    "kvno": "/usr/local/bin/kvno",
+    "libdeflate-gunzip": "/usr/local/bin/libdeflate-gunzip",
+    "libdeflate-gzip": "/usr/local/bin/libdeflate-gzip",
+    "lofreq": "/usr/local/bin/lofreq",
+    "lofreq2_call_pparallel.py": "/usr/local/bin/lofreq2_call_pparallel.py",
+    "lofreq2_indel_ovlp.py": "/usr/local/bin/lofreq2_indel_ovlp.py",
+    "lofreq2_somatic.py": "/usr/local/bin/lofreq2_somatic.py",
+    "lofreq2_vcfplot.py": "/usr/local/bin/lofreq2_vcfplot.py",
+    "lzcat": "/usr/local/bin/lzcat",
+    "lzcmp": "/usr/local/bin/lzcmp",
+    "lzdiff": "/usr/local/bin/lzdiff",
+    "lzegrep": "/usr/local/bin/lzegrep",
+    "lzfgrep": "/usr/local/bin/lzfgrep",
+    "lzgrep": "/usr/local/bin/lzgrep",
+    "lzless": "/usr/local/bin/lzless",
+    "lzma": "/usr/local/bin/lzma",
+    "lzmadec": "/usr/local/bin/lzmadec",
+    "lzmainfo": "/usr/local/bin/lzmainfo",
+    "lzmore": "/usr/local/bin/lzmore",
+    "maq2sam-long": "/usr/local/bin/maq2sam-long",
+    "maq2sam-short": "/usr/local/bin/maq2sam-short",
+    "md5fa": "/usr/local/bin/md5fa",
+    "md5sum-lite": "/usr/local/bin/md5sum-lite",
+    "minimap2": "/usr/local/bin/minimap2",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "nghttp": "/usr/local/bin/nghttp",
+    "nghttpd": "/usr/local/bin/nghttpd",
+    "nghttpx": "/usr/local/bin/nghttpx",
+    "novo2sam.pl": "/usr/local/bin/novo2sam.pl",
+    "openssl": "/usr/local/bin/openssl",
+    "pip": "/usr/local/bin/pip",
+    "pip3": "/usr/local/bin/pip3",
+    "plot-ampliconstats": "/usr/local/bin/plot-ampliconstats",
+    "plot-bamstats": "/usr/local/bin/plot-bamstats",
+    "psl2sam.pl": "/usr/local/bin/psl2sam.pl",
+    "pydoc": "/usr/local/bin/pydoc",
+    "pydoc3": "/usr/local/bin/pydoc3",
+    "pydoc3.12": "/usr/local/bin/pydoc3.12",
+    "python": "/usr/local/bin/python",
+    "python3": "/usr/local/bin/python3",
+    "python3-config": "/usr/local/bin/python3-config",
+    "python3.1": "/usr/local/bin/python3.1",
+    "python3.12": "/usr/local/bin/python3.12",
+    "python3.12-config": "/usr/local/bin/python3.12-config",
+    "reset": "/usr/local/bin/reset",
+    "run_dbghaplo_pipeline": "/usr/local/bin/run_dbghaplo_pipeline",
+    "sam2vcf.pl": "/usr/local/bin/sam2vcf.pl",
+    "samtools": "/usr/local/bin/samtools",
+    "samtools.pl": "/usr/local/bin/samtools.pl",
+    "sclient": "/usr/local/bin/sclient",
+    "seq_cache_populate.pl": "/usr/local/bin/seq_cache_populate.pl",
+    "sim_client": "/usr/local/bin/sim_client",
+    "soap2sam.pl": "/usr/local/bin/soap2sam.pl",
+    "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
+    "tabix": "/usr/local/bin/tabix",
+    "tabs": "/usr/local/bin/tabs",
+    "tclsh": "/usr/local/bin/tclsh",
+    "tclsh8.6": "/usr/local/bin/tclsh8.6",
+    "tic": "/usr/local/bin/tic",
+    "toe": "/usr/local/bin/toe",
+    "tput": "/usr/local/bin/tput",
+    "tset": "/usr/local/bin/tset",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unxz": "/usr/local/bin/unxz",
+    "unzstd": "/usr/local/bin/unzstd",
+    "uuclient": "/usr/local/bin/uuclient",
+    "wgsim": "/usr/local/bin/wgsim",
+    "wgsim_eval.pl": "/usr/local/bin/wgsim_eval.pl",
+    "wheel": "/usr/local/bin/wheel",
+    "wish": "/usr/local/bin/wish",
+    "wish8.6": "/usr/local/bin/wish8.6",
+    "write_contig_headers_vcf.py": "/usr/local/bin/write_contig_headers_vcf.py",
+    "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
+    "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore",
+    "zoom2sam.pl": "/usr/local/bin/zoom2sam.pl",
+    "zstd": "/usr/local/bin/zstd",
+    "zstdcat": "/usr/local/bin/zstdcat",
+    "zstdgrep": "/usr/local/bin/zstdgrep",
+    "zstdless": "/usr/local/bin/zstdless",
+    "zstdmt": "/usr/local/bin/zstdmt"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/m/minimizers:0.1.2--pyhdfd78af_0.json b/quay.io/biocontainers/m/minimizers:0.1.2--pyhdfd78af_0.json
new file mode 100644
index 0000000..3f23435
--- /dev/null
+++ b/quay.io/biocontainers/m/minimizers:0.1.2--pyhdfd78af_0.json
@@ -0,0 +1,102 @@
+{
+    "2to3": "/usr/local/bin/2to3",
+    "2to3-3.12": "/usr/local/bin/2to3-3.12",
+    "bio": "/usr/local/bin/bio",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "clear": "/usr/local/bin/clear",
+    "derb": "/usr/local/bin/derb",
+    "f2py": "/usr/local/bin/f2py",
+    "fasta_filter.py": "/usr/local/bin/fasta_filter.py",
+    "genbrk": "/usr/local/bin/genbrk",
+    "gencfu": "/usr/local/bin/gencfu",
+    "gencnval": "/usr/local/bin/gencnval",
+    "gendict": "/usr/local/bin/gendict",
+    "genrb": "/usr/local/bin/genrb",
+    "icu-config": "/usr/local/bin/icu-config",
+    "icuexportdata": "/usr/local/bin/icuexportdata",
+    "icuinfo": "/usr/local/bin/icuinfo",
+    "idle3": "/usr/local/bin/idle3",
+    "idle3.12": "/usr/local/bin/idle3.12",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "lzcat": "/usr/local/bin/lzcat",
+    "lzcmp": "/usr/local/bin/lzcmp",
+    "lzdiff": "/usr/local/bin/lzdiff",
+    "lzegrep": "/usr/local/bin/lzegrep",
+    "lzfgrep": "/usr/local/bin/lzfgrep",
+    "lzgrep": "/usr/local/bin/lzgrep",
+    "lzless": "/usr/local/bin/lzless",
+    "lzma": "/usr/local/bin/lzma",
+    "lzmadec": "/usr/local/bin/lzmadec",
+    "lzmainfo": "/usr/local/bin/lzmainfo",
+    "lzmore": "/usr/local/bin/lzmore",
+    "makeconv": "/usr/local/bin/makeconv",
+    "minimizers": "/usr/local/bin/minimizers",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "normalizer": "/usr/local/bin/normalizer",
+    "numpy-config": "/usr/local/bin/numpy-config",
+    "openssl": "/usr/local/bin/openssl",
+    "pip": "/usr/local/bin/pip",
+    "pip3": "/usr/local/bin/pip3",
+    "pkgdata": "/usr/local/bin/pkgdata",
+    "pydoc": "/usr/local/bin/pydoc",
+    "pydoc3": "/usr/local/bin/pydoc3",
+    "pydoc3.12": "/usr/local/bin/pydoc3.12",
+    "python": "/usr/local/bin/python",
+    "python3": "/usr/local/bin/python3",
+    "python3-config": "/usr/local/bin/python3-config",
+    "python3.1": "/usr/local/bin/python3.1",
+    "python3.12": "/usr/local/bin/python3.12",
+    "python3.12-config": "/usr/local/bin/python3.12-config",
+    "reset": "/usr/local/bin/reset",
+    "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
+    "tabs": "/usr/local/bin/tabs",
+    "tclsh": "/usr/local/bin/tclsh",
+    "tclsh8.6": "/usr/local/bin/tclsh8.6",
+    "tic": "/usr/local/bin/tic",
+    "toe": "/usr/local/bin/toe",
+    "tput": "/usr/local/bin/tput",
+    "tqdm": "/usr/local/bin/tqdm",
+    "tset": "/usr/local/bin/tset",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unxz": "/usr/local/bin/unxz",
+    "unzstd": "/usr/local/bin/unzstd",
+    "wheel": "/usr/local/bin/wheel",
+    "wish": "/usr/local/bin/wish",
+    "wish8.6": "/usr/local/bin/wish8.6",
+    "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
+    "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
+    "xml2-config": "/usr/local/bin/xml2-config",
+    "xmlcatalog": "/usr/local/bin/xmlcatalog",
+    "xmllint": "/usr/local/bin/xmllint",
+    "xslt-config": "/usr/local/bin/xslt-config",
+    "xsltproc": "/usr/local/bin/xsltproc",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore",
+    "zstd": "/usr/local/bin/zstd",
+    "zstdcat": "/usr/local/bin/zstdcat",
+    "zstdgrep": "/usr/local/bin/zstdgrep",
+    "zstdless": "/usr/local/bin/zstdless",
+    "zstdmt": "/usr/local/bin/zstdmt"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/s/sizemeup:1.2.3--pyhdfd78af_0.json b/quay.io/biocontainers/s/sizemeup:1.2.3--pyhdfd78af_0.json
new file mode 100644
index 0000000..e3fec69
--- /dev/null
+++ b/quay.io/biocontainers/s/sizemeup:1.2.3--pyhdfd78af_0.json
@@ -0,0 +1,86 @@
+{
+    "2to3": "/usr/local/bin/2to3",
+    "2to3-3.12": "/usr/local/bin/2to3-3.12",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "clear": "/usr/local/bin/clear",
+    "idle3": "/usr/local/bin/idle3",
+    "idle3.12": "/usr/local/bin/idle3.12",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "lzcat": "/usr/local/bin/lzcat",
+    "lzcmp": "/usr/local/bin/lzcmp",
+    "lzdiff": "/usr/local/bin/lzdiff",
+    "lzegrep": "/usr/local/bin/lzegrep",
+    "lzfgrep": "/usr/local/bin/lzfgrep",
+    "lzgrep": "/usr/local/bin/lzgrep",
+    "lzless": "/usr/local/bin/lzless",
+    "lzma": "/usr/local/bin/lzma",
+    "lzmadec": "/usr/local/bin/lzmadec",
+    "lzmainfo": "/usr/local/bin/lzmainfo",
+    "lzmore": "/usr/local/bin/lzmore",
+    "markdown-it": "/usr/local/bin/markdown-it",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "normalizer": "/usr/local/bin/normalizer",
+    "openssl": "/usr/local/bin/openssl",
+    "pip": "/usr/local/bin/pip",
+    "pip3": "/usr/local/bin/pip3",
+    "pydoc": "/usr/local/bin/pydoc",
+    "pydoc3": "/usr/local/bin/pydoc3",
+    "pydoc3.12": "/usr/local/bin/pydoc3.12",
+    "pygmentize": "/usr/local/bin/pygmentize",
+    "python": "/usr/local/bin/python",
+    "python3": "/usr/local/bin/python3",
+    "python3-config": "/usr/local/bin/python3-config",
+    "python3.1": "/usr/local/bin/python3.1",
+    "python3.12": "/usr/local/bin/python3.12",
+    "python3.12-config": "/usr/local/bin/python3.12-config",
+    "reset": "/usr/local/bin/reset",
+    "rich-click": "/usr/local/bin/rich-click",
+    "sizemeup": "/usr/local/bin/sizemeup",
+    "sizemeup-build": "/usr/local/bin/sizemeup-build",
+    "sizemeup-main": "/usr/local/bin/sizemeup-main",
+    "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
+    "tabs": "/usr/local/bin/tabs",
+    "tclsh": "/usr/local/bin/tclsh",
+    "tclsh8.6": "/usr/local/bin/tclsh8.6",
+    "tic": "/usr/local/bin/tic",
+    "toe": "/usr/local/bin/toe",
+    "tput": "/usr/local/bin/tput",
+    "tset": "/usr/local/bin/tset",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unxz": "/usr/local/bin/unxz",
+    "unzstd": "/usr/local/bin/unzstd",
+    "wheel": "/usr/local/bin/wheel",
+    "wish": "/usr/local/bin/wish",
+    "wish8.6": "/usr/local/bin/wish8.6",
+    "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
+    "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore",
+    "zstd": "/usr/local/bin/zstd",
+    "zstdcat": "/usr/local/bin/zstdcat",
+    "zstdgrep": "/usr/local/bin/zstdgrep",
+    "zstdless": "/usr/local/bin/zstdless",
+    "zstdmt": "/usr/local/bin/zstdmt"
+}
\ No newline at end of file