From 507e8481d96302706fabfb03bc5875ab818248aa Mon Sep 17 00:00:00 2001
From: github-actions <github-actions@users.noreply.github.com>
Date: Mon, 11 Nov 2024 00:54:05 +0000
Subject: [PATCH] Automated deployment with updated cache 2024-11-11

---
 counts.json                                   | 1023 +++++++++--------
 .../b/bam2plot:0.3.6--pyhdfd78af_0.json       |  195 ++++
 .../h/halfdeep:0.1.0--hdfd78af_0.json         |  395 +++++++
 .../m/minimac4:4.1.6--hd175d40_0.json         |  165 +++
 .../o/orthodb:0.9.0--pyhdfd78af_0.json        |   77 ++
 5 files changed, 1348 insertions(+), 507 deletions(-)
 create mode 100644 quay.io/biocontainers/b/bam2plot:0.3.6--pyhdfd78af_0.json
 create mode 100644 quay.io/biocontainers/h/halfdeep:0.1.0--hdfd78af_0.json
 create mode 100644 quay.io/biocontainers/m/minimac4:4.1.6--hd175d40_0.json
 create mode 100644 quay.io/biocontainers/o/orthodb:0.9.0--pyhdfd78af_0.json

diff --git a/counts.json b/counts.json
index c4b9264..75eb71a 100644
--- a/counts.json
+++ b/counts.json
@@ -2326,10 +2326,10 @@
     "2csfastq_1csfastq": 1,
     "2ft": 2,
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     "2to3-3.11": 283,
-    "2to3-3.12": 291,
+    "2to3-3.12": 292,
     "2to3-3.4": 6,
     "2to3-3.5": 103,
     "2to3-3.6": 344,
@@ -3957,7 +3957,7 @@
     "QueueingSystem.dll": 1,
     "QuickDeconvolution": 1,
     "QuickSNP.py": 1,
-    "R": 4683,
+    "R": 4684,
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     "R-scape-sim-nobps": 2,
@@ -4294,7 +4294,7 @@
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     "Rsample-smp": 5,
-    "Rscript": 4684,
+    "Rscript": 4685,
     "RunTHetA.py": 1,
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     "SAMMPileUpReader.py": 1,
@@ -5116,7 +5116,7 @@
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     "ace.pl": 56,
     "ace2contig": 2,
-    "ace2sam": 534,
+    "ace2sam": 535,
     "aci": 1,
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     "acmbuild": 1,
@@ -5215,7 +5215,7 @@
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     "adf_checker.pl": 1,
     "adhocfilelist": 1,
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+    "adig": 4625,
     "adjustPeakFile.pl": 5,
     "adjustRedunGroupFile.pl": 5,
     "adjustScanRankerScoreByGroup": 2,
@@ -5332,7 +5332,7 @@
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     "akita_data.py": 1,
     "akita_data_read.py": 1,
@@ -5611,7 +5611,7 @@
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     "annotate-partitions.py": 7,
@@ -6159,7 +6159,7 @@
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-    "awk": 112,
+    "awk": 113,
     "aws": 6,
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     "aws-delete-elastic-blast-janitor-role.sh": 1,
@@ -6196,7 +6196,7 @@
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     "b2": 2,
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     "b2w": 1,
     "bFst": 32,
     "bPTR": 1,
@@ -6306,6 +6306,7 @@
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     "bam2occupancy": 1,
     "bam2pairs": 22,
+    "bam2plot": 1,
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     "bam2starch-float128": 15,
@@ -6344,6 +6345,7 @@
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     "bam_count_reads.py": 1,
     "bam_cov.py": 2,
+    "bam_depth.sh": 1,
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     "bam_frag_coverage.py": 1,
     "bam_gc_vs_qual.py": 1,
@@ -6490,10 +6492,10 @@
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     "baseCalling_Matrix_calculator": 1,
@@ -6502,8 +6504,8 @@
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     "basemlg": 73,
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+    "basename": 86,
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@@ -6565,9 +6567,9 @@
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@@ -6628,7 +6630,7 @@
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@@ -6763,7 +6765,7 @@
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@@ -6956,7 +6958,7 @@
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     "blastMining": 1,
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@@ -7080,7 +7082,7 @@
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     "bowtie2-inspect-s": 116,
     "bowtie2_stuff.py": 2,
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     "bowtie_PE_separate_then_join.pl": 1,
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@@ -7247,7 +7249,7 @@
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@@ -7352,7 +7354,7 @@
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@@ -7406,16 +7408,16 @@
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-    "bzfgrep": 6813,
-    "bzgrep": 6813,
-    "bzip2": 6814,
-    "bzip2recover": 6813,
-    "bzless": 6813,
-    "bzmore": 6813,
+    "bzcat": 6817,
+    "bzcmp": 6817,
+    "bzdiff": 6817,
+    "bzegrep": 6817,
+    "bzfgrep": 6817,
+    "bzgrep": 6817,
+    "bzip2": 6818,
+    "bzip2recover": 6817,
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@@ -7432,7 +7434,7 @@
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@@ -7509,7 +7511,7 @@
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@@ -7613,7 +7615,7 @@
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@@ -7662,7 +7664,7 @@
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@@ -7717,7 +7719,7 @@
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@@ -7835,6 +7837,7 @@
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+    "cget": 1,
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     "cgpVCFSplit.pl": 6,
@@ -7873,7 +7876,7 @@
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     "check": 2,
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@@ -7950,7 +7953,7 @@
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@@ -7971,7 +7974,7 @@
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@@ -7998,7 +8001,7 @@
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@@ -8008,7 +8011,7 @@
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+    "chown": 86,
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     "chrom_sizes.pl": 92,
@@ -8023,7 +8026,7 @@
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@@ -8061,9 +8064,9 @@
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@@ -8172,7 +8175,7 @@
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@@ -8294,7 +8297,7 @@
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@@ -8420,7 +8423,7 @@
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@@ -8481,7 +8484,7 @@
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@@ -8550,7 +8553,7 @@
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@@ -8863,7 +8866,7 @@
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@@ -9160,12 +9163,12 @@
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@@ -9188,7 +9191,7 @@
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@@ -9219,14 +9222,14 @@
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@@ -9378,7 +9381,7 @@
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@@ -9514,7 +9517,7 @@
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@@ -9676,7 +9679,7 @@
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@@ -9726,7 +9729,7 @@
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@@ -9834,14 +9837,14 @@
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@@ -9884,7 +9887,7 @@
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@@ -10323,7 +10326,7 @@
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@@ -10367,8 +10370,8 @@
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@@ -10405,11 +10408,11 @@
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-    "elastishadow": 5,
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@@ -10455,8 +10458,8 @@
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@@ -10745,11 +10748,11 @@
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@@ -10953,7 +10956,7 @@
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@@ -10984,7 +10987,7 @@
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@@ -11040,7 +11043,7 @@
     "fasta-most": 13,
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     "fasta-re-match": 8,
-    "fasta-sanitize.pl": 332,
+    "fasta-sanitize.pl": 333,
     "fasta-shuffle-letters": 13,
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@@ -11377,19 +11380,19 @@
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     "favites_lite.py": 1,
-    "fax2ps": 5325,
-    "fax2tiff": 5325,
+    "fax2ps": 5327,
+    "fax2tiff": 5327,
     "fba": 1,
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@@ -26895,10 +26904,10 @@
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     "xml_split": 64,
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@@ -26940,7 +26949,7 @@
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-    "xzgrep": 7715,
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+    "xzegrep": 7719,
+    "xzfgrep": 7719,
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@@ -27002,7 +27011,7 @@
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@@ -27013,29 +27022,29 @@
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     "zff2gff3.pl": 2,
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     "zip": 17,
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     "zipcloak": 3,
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@@ -27045,12 +27054,12 @@
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     "zlib.net.dll": 4,
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@@ -27060,10 +27069,10 @@
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 }
\ No newline at end of file
diff --git a/quay.io/biocontainers/b/bam2plot:0.3.6--pyhdfd78af_0.json b/quay.io/biocontainers/b/bam2plot:0.3.6--pyhdfd78af_0.json
new file mode 100644
index 0000000..2e3646f
--- /dev/null
+++ b/quay.io/biocontainers/b/bam2plot:0.3.6--pyhdfd78af_0.json
@@ -0,0 +1,195 @@
+{
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+    "2to3-3.12": "/usr/local/bin/2to3-3.12",
+    "adig": "/usr/local/bin/adig",
+    "ahost": "/usr/local/bin/ahost",
+    "annot-tsv": "/usr/local/bin/annot-tsv",
+    "bam2plot": "/usr/local/bin/bam2plot",
+    "bgzip": "/usr/local/bin/bgzip",
+    "brotli": "/usr/local/bin/brotli",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "checksum-profile": "/usr/local/bin/checksum-profile",
+    "cjpeg": "/usr/local/bin/cjpeg",
+    "clear": "/usr/local/bin/clear",
+    "compile_et": "/usr/local/bin/compile_et",
+    "csv-import": "/usr/local/bin/csv-import",
+    "curl-config": "/usr/local/bin/curl-config",
+    "djpeg": "/usr/local/bin/djpeg",
+    "elasticurl": "/usr/local/bin/elasticurl",
+    "elasticurl_cpp": "/usr/local/bin/elasticurl_cpp",
+    "elastipubsub": "/usr/local/bin/elastipubsub",
+    "elastipubsub5": "/usr/local/bin/elastipubsub5",
+    "elastishadow": "/usr/local/bin/elastishadow",
+    "f2py": "/usr/local/bin/f2py",
+    "fax2ps": "/usr/local/bin/fax2ps",
+    "fax2tiff": "/usr/local/bin/fax2tiff",
+    "fonttools": "/usr/local/bin/fonttools",
+    "freetype-config": "/usr/local/bin/freetype-config",
+    "gflags_completions.sh": "/usr/local/bin/gflags_completions.sh",
+    "grpc_cpp_plugin": "/usr/local/bin/grpc_cpp_plugin",
+    "grpc_csharp_plugin": "/usr/local/bin/grpc_csharp_plugin",
+    "grpc_node_plugin": "/usr/local/bin/grpc_node_plugin",
+    "grpc_objective_c_plugin": "/usr/local/bin/grpc_objective_c_plugin",
+    "grpc_php_plugin": "/usr/local/bin/grpc_php_plugin",
+    "grpc_python_plugin": "/usr/local/bin/grpc_python_plugin",
+    "grpc_ruby_plugin": "/usr/local/bin/grpc_ruby_plugin",
+    "gss-client": "/usr/local/bin/gss-client",
+    "htsfile": "/usr/local/bin/htsfile",
+    "idle3": "/usr/local/bin/idle3",
+    "idle3.12": "/usr/local/bin/idle3.12",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "jpegtran": "/usr/local/bin/jpegtran",
+    "jpgicc": "/usr/local/bin/jpgicc",
+    "k5srvutil": "/usr/local/bin/k5srvutil",
+    "kadmin": "/usr/local/bin/kadmin",
+    "kdestroy": "/usr/local/bin/kdestroy",
+    "keyctl": "/usr/local/bin/keyctl",
+    "kinit": "/usr/local/bin/kinit",
+    "klist": "/usr/local/bin/klist",
+    "kpasswd": "/usr/local/bin/kpasswd",
+    "krb5-config": "/usr/local/bin/krb5-config",
+    "ksu": "/usr/local/bin/ksu",
+    "kswitch": "/usr/local/bin/kswitch",
+    "ktutil": "/usr/local/bin/ktutil",
+    "kvno": "/usr/local/bin/kvno",
+    "libdeflate-gunzip": "/usr/local/bin/libdeflate-gunzip",
+    "libdeflate-gzip": "/usr/local/bin/libdeflate-gzip",
+    "libpng-config": "/usr/local/bin/libpng-config",
+    "libpng16-config": "/usr/local/bin/libpng16-config",
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+    "lz4": "/usr/local/bin/lz4",
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+    "mosdepth": "/usr/local/bin/mosdepth",
+    "mqtt5_app": "/usr/local/bin/mqtt5_app",
+    "mqtt5_canary": "/usr/local/bin/mqtt5_canary",
+    "mqtt5canary": "/usr/local/bin/mqtt5canary",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "nghttp": "/usr/local/bin/nghttp",
+    "nghttpd": "/usr/local/bin/nghttpd",
+    "nghttpx": "/usr/local/bin/nghttpx",
+    "numpy-config": "/usr/local/bin/numpy-config",
+    "openssl": "/usr/local/bin/openssl",
+    "opj_compress": "/usr/local/bin/opj_compress",
+    "opj_decompress": "/usr/local/bin/opj_decompress",
+    "opj_dump": "/usr/local/bin/opj_dump",
+    "orc-contents": "/usr/local/bin/orc-contents",
+    "orc-memory": "/usr/local/bin/orc-memory",
+    "orc-metadata": "/usr/local/bin/orc-metadata",
+    "orc-scan": "/usr/local/bin/orc-scan",
+    "orc-statistics": "/usr/local/bin/orc-statistics",
+    "pal2rgb": "/usr/local/bin/pal2rgb",
+    "pip": "/usr/local/bin/pip",
+    "pip3": "/usr/local/bin/pip3",
+    "png-fix-itxt": "/usr/local/bin/png-fix-itxt",
+    "pngfix": "/usr/local/bin/pngfix",
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+    "protoc": "/usr/local/bin/protoc",
+    "protoc-28.2.0": "/usr/local/bin/protoc-28.2.0",
+    "psicc": "/usr/local/bin/psicc",
+    "pydoc": "/usr/local/bin/pydoc",
+    "pydoc3": "/usr/local/bin/pydoc3",
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+    "pyfastx": "/usr/local/bin/pyfastx",
+    "pyftmerge": "/usr/local/bin/pyftmerge",
+    "pyftsubset": "/usr/local/bin/pyftsubset",
+    "python": "/usr/local/bin/python",
+    "python3": "/usr/local/bin/python3",
+    "python3-config": "/usr/local/bin/python3-config",
+    "python3.1": "/usr/local/bin/python3.1",
+    "python3.12": "/usr/local/bin/python3.12",
+    "python3.12-config": "/usr/local/bin/python3.12-config",
+    "qconvex": "/usr/local/bin/qconvex",
+    "qdelaunay": "/usr/local/bin/qdelaunay",
+    "qhalf": "/usr/local/bin/qhalf",
+    "qhull": "/usr/local/bin/qhull",
+    "qvoronoi": "/usr/local/bin/qvoronoi",
+    "raw2tiff": "/usr/local/bin/raw2tiff",
+    "rbox": "/usr/local/bin/rbox",
+    "rdjpgcom": "/usr/local/bin/rdjpgcom",
+    "reset": "/usr/local/bin/reset",
+    "sclient": "/usr/local/bin/sclient",
+    "sim_client": "/usr/local/bin/sim_client",
+    "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
+    "tabix": "/usr/local/bin/tabix",
+    "tabs": "/usr/local/bin/tabs",
+    "tclsh": "/usr/local/bin/tclsh",
+    "tclsh8.6": "/usr/local/bin/tclsh8.6",
+    "tic": "/usr/local/bin/tic",
+    "tiff2bw": "/usr/local/bin/tiff2bw",
+    "tiff2pdf": "/usr/local/bin/tiff2pdf",
+    "tiff2ps": "/usr/local/bin/tiff2ps",
+    "tiff2rgba": "/usr/local/bin/tiff2rgba",
+    "tiffcmp": "/usr/local/bin/tiffcmp",
+    "tiffcp": "/usr/local/bin/tiffcp",
+    "tiffcrop": "/usr/local/bin/tiffcrop",
+    "tiffdither": "/usr/local/bin/tiffdither",
+    "tiffdump": "/usr/local/bin/tiffdump",
+    "tiffinfo": "/usr/local/bin/tiffinfo",
+    "tiffmedian": "/usr/local/bin/tiffmedian",
+    "tiffset": "/usr/local/bin/tiffset",
+    "tiffsplit": "/usr/local/bin/tiffsplit",
+    "tificc": "/usr/local/bin/tificc",
+    "timezone-dump": "/usr/local/bin/timezone-dump",
+    "tjbench": "/usr/local/bin/tjbench",
+    "toe": "/usr/local/bin/toe",
+    "tput": "/usr/local/bin/tput",
+    "transicc": "/usr/local/bin/transicc",
+    "tset": "/usr/local/bin/tset",
+    "ttx": "/usr/local/bin/ttx",
+    "unlz4": "/usr/local/bin/unlz4",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unxz": "/usr/local/bin/unxz",
+    "unzstd": "/usr/local/bin/unzstd",
+    "uuclient": "/usr/local/bin/uuclient",
+    "wheel": "/usr/local/bin/wheel",
+    "wish": "/usr/local/bin/wish",
+    "wish8.6": "/usr/local/bin/wish8.6",
+    "wrjpgcom": "/usr/local/bin/wrjpgcom",
+    "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
+    "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
+    "xml2-config": "/usr/local/bin/xml2-config",
+    "xmlcatalog": "/usr/local/bin/xmlcatalog",
+    "xmllint": "/usr/local/bin/xmllint",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore",
+    "zstd": "/usr/local/bin/zstd",
+    "zstdcat": "/usr/local/bin/zstdcat",
+    "zstdgrep": "/usr/local/bin/zstdgrep",
+    "zstdless": "/usr/local/bin/zstdless",
+    "zstdmt": "/usr/local/bin/zstdmt"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/h/halfdeep:0.1.0--hdfd78af_0.json b/quay.io/biocontainers/h/halfdeep:0.1.0--hdfd78af_0.json
new file mode 100644
index 0000000..cc405ef
--- /dev/null
+++ b/quay.io/biocontainers/h/halfdeep:0.1.0--hdfd78af_0.json
@@ -0,0 +1,395 @@
+{
+    "R": "/usr/local/bin/R",
+    "Rscript": "/usr/local/bin/Rscript",
+    "ace2sam": "/usr/local/bin/ace2sam",
+    "adig": "/usr/local/bin/adig",
+    "ahost": "/usr/local/bin/ahost",
+    "annot-tsv": "/usr/local/bin/annot-tsv",
+    "awk": "/usr/local/bin/awk",
+    "b2sum": "/usr/local/bin/b2sum",
+    "bam_depth.sh": "/usr/local/bin/bam_depth.sh",
+    "base32": "/usr/local/bin/base32",
+    "base64": "/usr/local/bin/base64",
+    "basename": "/usr/local/bin/basename",
+    "basenc": "/usr/local/bin/basenc",
+    "bash": "/usr/local/bin/bash",
+    "bashbug": "/usr/local/bin/bashbug",
+    "bgzip": "/usr/local/bin/bgzip",
+    "blast2sam.pl": "/usr/local/bin/blast2sam.pl",
+    "bowtie2sam.pl": "/usr/local/bin/bowtie2sam.pl",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "cairo-trace": "/usr/local/bin/cairo-trace",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "cat": "/usr/local/bin/cat",
+    "chcon": "/usr/local/bin/chcon",
+    "chgrp": "/usr/local/bin/chgrp",
+    "chmod": "/usr/local/bin/chmod",
+    "chown": "/usr/local/bin/chown",
+    "chroot": "/usr/local/bin/chroot",
+    "cjpeg": "/usr/local/bin/cjpeg",
+    "cksum": "/usr/local/bin/cksum",
+    "clear": "/usr/local/bin/clear",
+    "comm": "/usr/local/bin/comm",
+    "compile_et": "/usr/local/bin/compile_et",
+    "cp": "/usr/local/bin/cp",
+    "csplit": "/usr/local/bin/csplit",
+    "curl": "/usr/local/bin/curl",
+    "curl-config": "/usr/local/bin/curl-config",
+    "cut": "/usr/local/bin/cut",
+    "date": "/usr/local/bin/date",
+    "dd": "/usr/local/bin/dd",
+    "derb": "/usr/local/bin/derb",
+    "df": "/usr/local/bin/df",
+    "dir": "/usr/local/bin/dir",
+    "dircolors": "/usr/local/bin/dircolors",
+    "dirname": "/usr/local/bin/dirname",
+    "djpeg": "/usr/local/bin/djpeg",
+    "du": "/usr/local/bin/du",
+    "echo": "/usr/local/bin/echo",
+    "egrep": "/usr/local/bin/egrep",
+    "env": "/usr/local/bin/env",
+    "expand": "/usr/local/bin/expand",
+    "export2sam.pl": "/usr/local/bin/export2sam.pl",
+    "expr": "/usr/local/bin/expr",
+    "factor": "/usr/local/bin/factor",
+    "false": "/usr/local/bin/false",
+    "fasta-sanitize.pl": "/usr/local/bin/fasta-sanitize.pl",
+    "fax2ps": "/usr/local/bin/fax2ps",
+    "fax2tiff": "/usr/local/bin/fax2tiff",
+    "fc-cache": "/usr/local/bin/fc-cache",
+    "fc-cat": "/usr/local/bin/fc-cat",
+    "fc-conflist": "/usr/local/bin/fc-conflist",
+    "fc-list": "/usr/local/bin/fc-list",
+    "fc-match": "/usr/local/bin/fc-match",
+    "fc-pattern": "/usr/local/bin/fc-pattern",
+    "fc-query": "/usr/local/bin/fc-query",
+    "fc-scan": "/usr/local/bin/fc-scan",
+    "fc-validate": "/usr/local/bin/fc-validate",
+    "fgrep": "/usr/local/bin/fgrep",
+    "fmt": "/usr/local/bin/fmt",
+    "fold": "/usr/local/bin/fold",
+    "freetype-config": "/usr/local/bin/freetype-config",
+    "fribidi": "/usr/local/bin/fribidi",
+    "gawk": "/usr/local/bin/gawk",
+    "gawk-5.3.1": "/usr/local/bin/gawk-5.3.1",
+    "gawkbug": "/usr/local/bin/gawkbug",
+    "genbrk": "/usr/local/bin/genbrk",
+    "gencfu": "/usr/local/bin/gencfu",
+    "gencnval": "/usr/local/bin/gencnval",
+    "gendict": "/usr/local/bin/gendict",
+    "genodsp": "/usr/local/bin/genodsp",
+    "genrb": "/usr/local/bin/genrb",
+    "grep": "/usr/local/bin/grep",
+    "groups": "/usr/local/bin/groups",
+    "gsl-config": "/usr/local/bin/gsl-config",
+    "gsl-histogram": "/usr/local/bin/gsl-histogram",
+    "gsl-randist": "/usr/local/bin/gsl-randist",
+    "gss-client": "/usr/local/bin/gss-client",
+    "gunzip": "/usr/local/bin/gunzip",
+    "gzexe": "/usr/local/bin/gzexe",
+    "gzip": "/usr/local/bin/gzip",
+    "halfdeep.r": "/usr/local/bin/halfdeep.r",
+    "halfdeep.sh": "/usr/local/bin/halfdeep.sh",
+    "hb-info": "/usr/local/bin/hb-info",
+    "hb-ot-shape-closure": "/usr/local/bin/hb-ot-shape-closure",
+    "hb-shape": "/usr/local/bin/hb-shape",
+    "hb-subset": "/usr/local/bin/hb-subset",
+    "hb-view": "/usr/local/bin/hb-view",
+    "head": "/usr/local/bin/head",
+    "hostid": "/usr/local/bin/hostid",
+    "htsfile": "/usr/local/bin/htsfile",
+    "icu-config": "/usr/local/bin/icu-config",
+    "icuexportdata": "/usr/local/bin/icuexportdata",
+    "icuinfo": "/usr/local/bin/icuinfo",
+    "id": "/usr/local/bin/id",
+    "idle3": "/usr/local/bin/idle3",
+    "idle3.13": "/usr/local/bin/idle3.13",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "install": "/usr/local/bin/install",
+    "interpolate_sam.pl": "/usr/local/bin/interpolate_sam.pl",
+    "join": "/usr/local/bin/join",
+    "jpegtran": "/usr/local/bin/jpegtran",
+    "k5srvutil": "/usr/local/bin/k5srvutil",
+    "kadmin": "/usr/local/bin/kadmin",
+    "kdestroy": "/usr/local/bin/kdestroy",
+    "keyctl": "/usr/local/bin/keyctl",
+    "kill": "/usr/local/bin/kill",
+    "kinit": "/usr/local/bin/kinit",
+    "klist": "/usr/local/bin/klist",
+    "kpasswd": "/usr/local/bin/kpasswd",
+    "krb5-config": "/usr/local/bin/krb5-config",
+    "ksu": "/usr/local/bin/ksu",
+    "kswitch": "/usr/local/bin/kswitch",
+    "ktutil": "/usr/local/bin/ktutil",
+    "kvno": "/usr/local/bin/kvno",
+    "libdeflate-gunzip": "/usr/local/bin/libdeflate-gunzip",
+    "libdeflate-gzip": "/usr/local/bin/libdeflate-gzip",
+    "libpng-config": "/usr/local/bin/libpng-config",
+    "libpng16-config": "/usr/local/bin/libpng16-config",
+    "link": "/usr/local/bin/link",
+    "ln": "/usr/local/bin/ln",
+    "logname": "/usr/local/bin/logname",
+    "ls": "/usr/local/bin/ls",
+    "lzcat": "/usr/local/bin/lzcat",
+    "lzcmp": "/usr/local/bin/lzcmp",
+    "lzdiff": "/usr/local/bin/lzdiff",
+    "lzegrep": "/usr/local/bin/lzegrep",
+    "lzfgrep": "/usr/local/bin/lzfgrep",
+    "lzgrep": "/usr/local/bin/lzgrep",
+    "lzless": "/usr/local/bin/lzless",
+    "lzma": "/usr/local/bin/lzma",
+    "lzmadec": "/usr/local/bin/lzmadec",
+    "lzmainfo": "/usr/local/bin/lzmainfo",
+    "lzmore": "/usr/local/bin/lzmore",
+    "make": "/usr/local/bin/make",
+    "makeconv": "/usr/local/bin/makeconv",
+    "maq2sam-long": "/usr/local/bin/maq2sam-long",
+    "maq2sam-short": "/usr/local/bin/maq2sam-short",
+    "md5fa": "/usr/local/bin/md5fa",
+    "md5sum": "/usr/local/bin/md5sum",
+    "md5sum-lite": "/usr/local/bin/md5sum-lite",
+    "minimap2": "/usr/local/bin/minimap2",
+    "mkdir": "/usr/local/bin/mkdir",
+    "mkfifo": "/usr/local/bin/mkfifo",
+    "mknod": "/usr/local/bin/mknod",
+    "mktemp": "/usr/local/bin/mktemp",
+    "mv": "/usr/local/bin/mv",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "nghttp": "/usr/local/bin/nghttp",
+    "nghttpd": "/usr/local/bin/nghttpd",
+    "nghttpx": "/usr/local/bin/nghttpx",
+    "nice": "/usr/local/bin/nice",
+    "nl": "/usr/local/bin/nl",
+    "nohup": "/usr/local/bin/nohup",
+    "novo2sam.pl": "/usr/local/bin/novo2sam.pl",
+    "nproc": "/usr/local/bin/nproc",
+    "numfmt": "/usr/local/bin/numfmt",
+    "od": "/usr/local/bin/od",
+    "openssl": "/usr/local/bin/openssl",
+    "pal2rgb": "/usr/local/bin/pal2rgb",
+    "pango-list": "/usr/local/bin/pango-list",
+    "pango-segmentation": "/usr/local/bin/pango-segmentation",
+    "pango-view": "/usr/local/bin/pango-view",
+    "paste": "/usr/local/bin/paste",
+    "pathchk": "/usr/local/bin/pathchk",
+    "pcre2-config": "/usr/local/bin/pcre2-config",
+    "pcre2grep": "/usr/local/bin/pcre2grep",
+    "pcre2test": "/usr/local/bin/pcre2test",
+    "pinky": "/usr/local/bin/pinky",
+    "pip": "/usr/local/bin/pip",
+    "pip3": "/usr/local/bin/pip3",
+    "pkgdata": "/usr/local/bin/pkgdata",
+    "plot-ampliconstats": "/usr/local/bin/plot-ampliconstats",
+    "plot-bamstats": "/usr/local/bin/plot-bamstats",
+    "png-fix-itxt": "/usr/local/bin/png-fix-itxt",
+    "pngfix": "/usr/local/bin/pngfix",
+    "ppm2tiff": "/usr/local/bin/ppm2tiff",
+    "pr": "/usr/local/bin/pr",
+    "printenv": "/usr/local/bin/printenv",
+    "printf": "/usr/local/bin/printf",
+    "psl2sam.pl": "/usr/local/bin/psl2sam.pl",
+    "ptx": "/usr/local/bin/ptx",
+    "pwd": "/usr/local/bin/pwd",
+    "pydoc": "/usr/local/bin/pydoc",
+    "pydoc3": "/usr/local/bin/pydoc3",
+    "pydoc3.13": "/usr/local/bin/pydoc3.13",
+    "python": "/usr/local/bin/python",
+    "python3": "/usr/local/bin/python3",
+    "python3-config": "/usr/local/bin/python3-config",
+    "python3.1": "/usr/local/bin/python3.1",
+    "python3.13": "/usr/local/bin/python3.13",
+    "python3.13-config": "/usr/local/bin/python3.13-config",
+    "raw2tiff": "/usr/local/bin/raw2tiff",
+    "rdjpgcom": "/usr/local/bin/rdjpgcom",
+    "readlink": "/usr/local/bin/readlink",
+    "realpath": "/usr/local/bin/realpath",
+    "reset": "/usr/local/bin/reset",
+    "rm": "/usr/local/bin/rm",
+    "rmdir": "/usr/local/bin/rmdir",
+    "runcon": "/usr/local/bin/runcon",
+    "sam2vcf.pl": "/usr/local/bin/sam2vcf.pl",
+    "samtools": "/usr/local/bin/samtools",
+    "samtools.pl": "/usr/local/bin/samtools.pl",
+    "scaffold_lengths.py": "/usr/local/bin/scaffold_lengths.py",
+    "sclient": "/usr/local/bin/sclient",
+    "sed": "/usr/local/bin/sed",
+    "seq": "/usr/local/bin/seq",
+    "seq_cache_populate.pl": "/usr/local/bin/seq_cache_populate.pl",
+    "sha1sum": "/usr/local/bin/sha1sum",
+    "sha224sum": "/usr/local/bin/sha224sum",
+    "sha256sum": "/usr/local/bin/sha256sum",
+    "sha384sum": "/usr/local/bin/sha384sum",
+    "sha512sum": "/usr/local/bin/sha512sum",
+    "shred": "/usr/local/bin/shred",
+    "shuf": "/usr/local/bin/shuf",
+    "sim_client": "/usr/local/bin/sim_client",
+    "sleep": "/usr/local/bin/sleep",
+    "soap2sam.pl": "/usr/local/bin/soap2sam.pl",
+    "sort": "/usr/local/bin/sort",
+    "split": "/usr/local/bin/split",
+    "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
+    "stat": "/usr/local/bin/stat",
+    "stdbuf": "/usr/local/bin/stdbuf",
+    "stty": "/usr/local/bin/stty",
+    "sum": "/usr/local/bin/sum",
+    "sync": "/usr/local/bin/sync",
+    "tabix": "/usr/local/bin/tabix",
+    "tabs": "/usr/local/bin/tabs",
+    "tac": "/usr/local/bin/tac",
+    "tail": "/usr/local/bin/tail",
+    "tclsh": "/usr/local/bin/tclsh",
+    "tclsh8.6": "/usr/local/bin/tclsh8.6",
+    "tee": "/usr/local/bin/tee",
+    "test": "/usr/local/bin/test",
+    "tic": "/usr/local/bin/tic",
+    "tiff2bw": "/usr/local/bin/tiff2bw",
+    "tiff2pdf": "/usr/local/bin/tiff2pdf",
+    "tiff2ps": "/usr/local/bin/tiff2ps",
+    "tiff2rgba": "/usr/local/bin/tiff2rgba",
+    "tiffcmp": "/usr/local/bin/tiffcmp",
+    "tiffcp": "/usr/local/bin/tiffcp",
+    "tiffcrop": "/usr/local/bin/tiffcrop",
+    "tiffdither": "/usr/local/bin/tiffdither",
+    "tiffdump": "/usr/local/bin/tiffdump",
+    "tiffinfo": "/usr/local/bin/tiffinfo",
+    "tiffmedian": "/usr/local/bin/tiffmedian",
+    "tiffset": "/usr/local/bin/tiffset",
+    "tiffsplit": "/usr/local/bin/tiffsplit",
+    "timeout": "/usr/local/bin/timeout",
+    "tjbench": "/usr/local/bin/tjbench",
+    "toe": "/usr/local/bin/toe",
+    "touch": "/usr/local/bin/touch",
+    "tput": "/usr/local/bin/tput",
+    "tr": "/usr/local/bin/tr",
+    "true": "/usr/local/bin/true",
+    "truncate": "/usr/local/bin/truncate",
+    "tset": "/usr/local/bin/tset",
+    "tsort": "/usr/local/bin/tsort",
+    "tty": "/usr/local/bin/tty",
+    "uname": "/usr/local/bin/uname",
+    "uncompress": "/usr/local/bin/uncompress",
+    "unexpand": "/usr/local/bin/unexpand",
+    "uniq": "/usr/local/bin/uniq",
+    "unlink": "/usr/local/bin/unlink",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unxz": "/usr/local/bin/unxz",
+    "unzstd": "/usr/local/bin/unzstd",
+    "uptime": "/usr/local/bin/uptime",
+    "users": "/usr/local/bin/users",
+    "uuclient": "/usr/local/bin/uuclient",
+    "vdir": "/usr/local/bin/vdir",
+    "wc": "/usr/local/bin/wc",
+    "wgsim": "/usr/local/bin/wgsim",
+    "wgsim_eval.pl": "/usr/local/bin/wgsim_eval.pl",
+    "who": "/usr/local/bin/who",
+    "whoami": "/usr/local/bin/whoami",
+    "wish": "/usr/local/bin/wish",
+    "wish8.6": "/usr/local/bin/wish8.6",
+    "wrjpgcom": "/usr/local/bin/wrjpgcom",
+    "x86_64-conda-linux-gnu-addr2line": "/usr/local/bin/x86_64-conda-linux-gnu-addr2line",
+    "x86_64-conda-linux-gnu-ar": "/usr/local/bin/x86_64-conda-linux-gnu-ar",
+    "x86_64-conda-linux-gnu-as": "/usr/local/bin/x86_64-conda-linux-gnu-as",
+    "x86_64-conda-linux-gnu-c++": "/usr/local/bin/x86_64-conda-linux-gnu-c++",
+    "x86_64-conda-linux-gnu-c++filt": "/usr/local/bin/x86_64-conda-linux-gnu-c++filt",
+    "x86_64-conda-linux-gnu-c89": "/usr/local/bin/x86_64-conda-linux-gnu-c89",
+    "x86_64-conda-linux-gnu-c99": "/usr/local/bin/x86_64-conda-linux-gnu-c99",
+    "x86_64-conda-linux-gnu-cc": "/usr/local/bin/x86_64-conda-linux-gnu-cc",
+    "x86_64-conda-linux-gnu-cpp": "/usr/local/bin/x86_64-conda-linux-gnu-cpp",
+    "x86_64-conda-linux-gnu-dwp": "/usr/local/bin/x86_64-conda-linux-gnu-dwp",
+    "x86_64-conda-linux-gnu-elfedit": "/usr/local/bin/x86_64-conda-linux-gnu-elfedit",
+    "x86_64-conda-linux-gnu-f95": "/usr/local/bin/x86_64-conda-linux-gnu-f95",
+    "x86_64-conda-linux-gnu-g++": "/usr/local/bin/x86_64-conda-linux-gnu-g++",
+    "x86_64-conda-linux-gnu-gcc": "/usr/local/bin/x86_64-conda-linux-gnu-gcc",
+    "x86_64-conda-linux-gnu-gcc-ar": "/usr/local/bin/x86_64-conda-linux-gnu-gcc-ar",
+    "x86_64-conda-linux-gnu-gcc-nm": "/usr/local/bin/x86_64-conda-linux-gnu-gcc-nm",
+    "x86_64-conda-linux-gnu-gcc-ranlib": "/usr/local/bin/x86_64-conda-linux-gnu-gcc-ranlib",
+    "x86_64-conda-linux-gnu-gcov": "/usr/local/bin/x86_64-conda-linux-gnu-gcov",
+    "x86_64-conda-linux-gnu-gcov-dump": "/usr/local/bin/x86_64-conda-linux-gnu-gcov-dump",
+    "x86_64-conda-linux-gnu-gcov-tool": "/usr/local/bin/x86_64-conda-linux-gnu-gcov-tool",
+    "x86_64-conda-linux-gnu-gfortran": "/usr/local/bin/x86_64-conda-linux-gnu-gfortran",
+    "x86_64-conda-linux-gnu-gprof": "/usr/local/bin/x86_64-conda-linux-gnu-gprof",
+    "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
+    "x86_64-conda-linux-gnu-ld.bfd": "/usr/local/bin/x86_64-conda-linux-gnu-ld.bfd",
+    "x86_64-conda-linux-gnu-ld.gold": "/usr/local/bin/x86_64-conda-linux-gnu-ld.gold",
+    "x86_64-conda-linux-gnu-nm": "/usr/local/bin/x86_64-conda-linux-gnu-nm",
+    "x86_64-conda-linux-gnu-objcopy": "/usr/local/bin/x86_64-conda-linux-gnu-objcopy",
+    "x86_64-conda-linux-gnu-objdump": "/usr/local/bin/x86_64-conda-linux-gnu-objdump",
+    "x86_64-conda-linux-gnu-ranlib": "/usr/local/bin/x86_64-conda-linux-gnu-ranlib",
+    "x86_64-conda-linux-gnu-readelf": "/usr/local/bin/x86_64-conda-linux-gnu-readelf",
+    "x86_64-conda-linux-gnu-size": "/usr/local/bin/x86_64-conda-linux-gnu-size",
+    "x86_64-conda-linux-gnu-strings": "/usr/local/bin/x86_64-conda-linux-gnu-strings",
+    "x86_64-conda-linux-gnu-strip": "/usr/local/bin/x86_64-conda-linux-gnu-strip",
+    "x86_64-conda-linux-gnu.cfg": "/usr/local/bin/x86_64-conda-linux-gnu.cfg",
+    "x86_64-conda_cos6-linux-gnu-addr2line": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-addr2line",
+    "x86_64-conda_cos6-linux-gnu-ar": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ar",
+    "x86_64-conda_cos6-linux-gnu-as": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-as",
+    "x86_64-conda_cos6-linux-gnu-c++": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c++",
+    "x86_64-conda_cos6-linux-gnu-c++filt": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c++filt",
+    "x86_64-conda_cos6-linux-gnu-c89": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c89",
+    "x86_64-conda_cos6-linux-gnu-c99": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c99",
+    "x86_64-conda_cos6-linux-gnu-cc": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-cc",
+    "x86_64-conda_cos6-linux-gnu-cpp": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-cpp",
+    "x86_64-conda_cos6-linux-gnu-dwp": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-dwp",
+    "x86_64-conda_cos6-linux-gnu-elfedit": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-elfedit",
+    "x86_64-conda_cos6-linux-gnu-f95": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-f95",
+    "x86_64-conda_cos6-linux-gnu-g++": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-g++",
+    "x86_64-conda_cos6-linux-gnu-gcc": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc",
+    "x86_64-conda_cos6-linux-gnu-gcc-ar": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc-ar",
+    "x86_64-conda_cos6-linux-gnu-gcc-nm": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc-nm",
+    "x86_64-conda_cos6-linux-gnu-gcc-ranlib": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc-ranlib",
+    "x86_64-conda_cos6-linux-gnu-gcov": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcov",
+    "x86_64-conda_cos6-linux-gnu-gcov-dump": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcov-dump",
+    "x86_64-conda_cos6-linux-gnu-gcov-tool": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcov-tool",
+    "x86_64-conda_cos6-linux-gnu-gfortran": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gfortran",
+    "x86_64-conda_cos6-linux-gnu-gprof": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gprof",
+    "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
+    "x86_64-conda_cos6-linux-gnu-ld.bfd": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld.bfd",
+    "x86_64-conda_cos6-linux-gnu-ld.gold": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld.gold",
+    "x86_64-conda_cos6-linux-gnu-nm": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-nm",
+    "x86_64-conda_cos6-linux-gnu-objcopy": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-objcopy",
+    "x86_64-conda_cos6-linux-gnu-objdump": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-objdump",
+    "x86_64-conda_cos6-linux-gnu-ranlib": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ranlib",
+    "x86_64-conda_cos6-linux-gnu-readelf": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-readelf",
+    "x86_64-conda_cos6-linux-gnu-size": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-size",
+    "x86_64-conda_cos6-linux-gnu-strings": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-strings",
+    "x86_64-conda_cos6-linux-gnu-strip": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-strip",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore",
+    "yes": "/usr/local/bin/yes",
+    "zcat": "/usr/local/bin/zcat",
+    "zcmp": "/usr/local/bin/zcmp",
+    "zdiff": "/usr/local/bin/zdiff",
+    "zegrep": "/usr/local/bin/zegrep",
+    "zfgrep": "/usr/local/bin/zfgrep",
+    "zforce": "/usr/local/bin/zforce",
+    "zgrep": "/usr/local/bin/zgrep",
+    "zmore": "/usr/local/bin/zmore",
+    "znew": "/usr/local/bin/znew",
+    "zoom2sam.pl": "/usr/local/bin/zoom2sam.pl",
+    "zstd": "/usr/local/bin/zstd",
+    "zstdcat": "/usr/local/bin/zstdcat",
+    "zstdgrep": "/usr/local/bin/zstdgrep",
+    "zstdless": "/usr/local/bin/zstdless",
+    "zstdmt": "/usr/local/bin/zstdmt"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/m/minimac4:4.1.6--hd175d40_0.json b/quay.io/biocontainers/m/minimac4:4.1.6--hd175d40_0.json
new file mode 100644
index 0000000..23690d5
--- /dev/null
+++ b/quay.io/biocontainers/m/minimac4:4.1.6--hd175d40_0.json
@@ -0,0 +1,165 @@
+{
+    "adig": "/usr/local/bin/adig",
+    "ahost": "/usr/local/bin/ahost",
+    "annot-tsv": "/usr/local/bin/annot-tsv",
+    "bcftools": "/usr/local/bin/bcftools",
+    "bgzip": "/usr/local/bin/bgzip",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "ccmake": "/usr/local/bin/ccmake",
+    "cget": "/usr/local/bin/cget",
+    "clear": "/usr/local/bin/clear",
+    "cmake": "/usr/local/bin/cmake",
+    "color-chrs.pl": "/usr/local/bin/color-chrs.pl",
+    "compile_et": "/usr/local/bin/compile_et",
+    "corelist": "/usr/local/bin/corelist",
+    "cpack": "/usr/local/bin/cpack",
+    "cpan": "/usr/local/bin/cpan",
+    "ctest": "/usr/local/bin/ctest",
+    "curl-config": "/usr/local/bin/curl-config",
+    "ed2k-link": "/usr/local/bin/ed2k-link",
+    "edonr256-hash": "/usr/local/bin/edonr256-hash",
+    "edonr512-hash": "/usr/local/bin/edonr512-hash",
+    "enc2xs": "/usr/local/bin/enc2xs",
+    "encguess": "/usr/local/bin/encguess",
+    "gff2gff.py": "/usr/local/bin/gff2gff.py",
+    "gost12-256-hash": "/usr/local/bin/gost12-256-hash",
+    "gost12-512-hash": "/usr/local/bin/gost12-512-hash",
+    "gsl-config": "/usr/local/bin/gsl-config",
+    "gsl-histogram": "/usr/local/bin/gsl-histogram",
+    "gsl-randist": "/usr/local/bin/gsl-randist",
+    "gss-client": "/usr/local/bin/gss-client",
+    "guess-ploidy.py": "/usr/local/bin/guess-ploidy.py",
+    "h2ph": "/usr/local/bin/h2ph",
+    "h2xs": "/usr/local/bin/h2xs",
+    "has160-hash": "/usr/local/bin/has160-hash",
+    "htsfile": "/usr/local/bin/htsfile",
+    "idle3": "/usr/local/bin/idle3",
+    "idle3.13": "/usr/local/bin/idle3.13",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "instmodsh": "/usr/local/bin/instmodsh",
+    "json_pp": "/usr/local/bin/json_pp",
+    "k5srvutil": "/usr/local/bin/k5srvutil",
+    "kadmin": "/usr/local/bin/kadmin",
+    "kdestroy": "/usr/local/bin/kdestroy",
+    "keyctl": "/usr/local/bin/keyctl",
+    "kinit": "/usr/local/bin/kinit",
+    "klist": "/usr/local/bin/klist",
+    "kpasswd": "/usr/local/bin/kpasswd",
+    "krb5-config": "/usr/local/bin/krb5-config",
+    "ksu": "/usr/local/bin/ksu",
+    "kswitch": "/usr/local/bin/kswitch",
+    "ktutil": "/usr/local/bin/ktutil",
+    "kvno": "/usr/local/bin/kvno",
+    "libdeflate-gunzip": "/usr/local/bin/libdeflate-gunzip",
+    "libdeflate-gzip": "/usr/local/bin/libdeflate-gzip",
+    "libnetcfg": "/usr/local/bin/libnetcfg",
+    "lzcat": "/usr/local/bin/lzcat",
+    "lzcmp": "/usr/local/bin/lzcmp",
+    "lzdiff": "/usr/local/bin/lzdiff",
+    "lzegrep": "/usr/local/bin/lzegrep",
+    "lzfgrep": "/usr/local/bin/lzfgrep",
+    "lzgrep": "/usr/local/bin/lzgrep",
+    "lzless": "/usr/local/bin/lzless",
+    "lzma": "/usr/local/bin/lzma",
+    "lzmadec": "/usr/local/bin/lzmadec",
+    "lzmainfo": "/usr/local/bin/lzmainfo",
+    "lzmore": "/usr/local/bin/lzmore",
+    "magnet-link": "/usr/local/bin/magnet-link",
+    "minimac4": "/usr/local/bin/minimac4",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "nghttp": "/usr/local/bin/nghttp",
+    "nghttpd": "/usr/local/bin/nghttpd",
+    "nghttpx": "/usr/local/bin/nghttpx",
+    "openssl": "/usr/local/bin/openssl",
+    "perl": "/usr/local/bin/perl",
+    "perl5.32.1": "/usr/local/bin/perl5.32.1",
+    "perlbug": "/usr/local/bin/perlbug",
+    "perldoc": "/usr/local/bin/perldoc",
+    "perlivp": "/usr/local/bin/perlivp",
+    "perlthanks": "/usr/local/bin/perlthanks",
+    "piconv": "/usr/local/bin/piconv",
+    "pip": "/usr/local/bin/pip",
+    "pip3": "/usr/local/bin/pip3",
+    "pl2pm": "/usr/local/bin/pl2pm",
+    "plot-roh.py": "/usr/local/bin/plot-roh.py",
+    "plot-vcfstats": "/usr/local/bin/plot-vcfstats",
+    "pod2html": "/usr/local/bin/pod2html",
+    "pod2man": "/usr/local/bin/pod2man",
+    "pod2text": "/usr/local/bin/pod2text",
+    "pod2usage": "/usr/local/bin/pod2usage",
+    "podchecker": "/usr/local/bin/podchecker",
+    "prove": "/usr/local/bin/prove",
+    "ptar": "/usr/local/bin/ptar",
+    "ptardiff": "/usr/local/bin/ptardiff",
+    "ptargrep": "/usr/local/bin/ptargrep",
+    "pydoc": "/usr/local/bin/pydoc",
+    "pydoc3": "/usr/local/bin/pydoc3",
+    "pydoc3.13": "/usr/local/bin/pydoc3.13",
+    "python": "/usr/local/bin/python",
+    "python3": "/usr/local/bin/python3",
+    "python3-config": "/usr/local/bin/python3-config",
+    "python3.1": "/usr/local/bin/python3.1",
+    "python3.13": "/usr/local/bin/python3.13",
+    "python3.13-config": "/usr/local/bin/python3.13-config",
+    "reset": "/usr/local/bin/reset",
+    "rhash": "/usr/local/bin/rhash",
+    "run-roh.pl": "/usr/local/bin/run-roh.pl",
+    "sclient": "/usr/local/bin/sclient",
+    "sfv-hash": "/usr/local/bin/sfv-hash",
+    "shasum": "/usr/local/bin/shasum",
+    "sim_client": "/usr/local/bin/sim_client",
+    "splain": "/usr/local/bin/splain",
+    "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
+    "streamzip": "/usr/local/bin/streamzip",
+    "tabix": "/usr/local/bin/tabix",
+    "tabs": "/usr/local/bin/tabs",
+    "tclsh": "/usr/local/bin/tclsh",
+    "tclsh8.6": "/usr/local/bin/tclsh8.6",
+    "tic": "/usr/local/bin/tic",
+    "tiger-hash": "/usr/local/bin/tiger-hash",
+    "toe": "/usr/local/bin/toe",
+    "tput": "/usr/local/bin/tput",
+    "tset": "/usr/local/bin/tset",
+    "tth-hash": "/usr/local/bin/tth-hash",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unxz": "/usr/local/bin/unxz",
+    "unzstd": "/usr/local/bin/unzstd",
+    "uuclient": "/usr/local/bin/uuclient",
+    "vcfutils.pl": "/usr/local/bin/vcfutils.pl",
+    "whirlpool-hash": "/usr/local/bin/whirlpool-hash",
+    "wish": "/usr/local/bin/wish",
+    "wish8.6": "/usr/local/bin/wish8.6",
+    "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
+    "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
+    "xsubpp": "/usr/local/bin/xsubpp",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore",
+    "zipdetails": "/usr/local/bin/zipdetails",
+    "zstd": "/usr/local/bin/zstd",
+    "zstdcat": "/usr/local/bin/zstdcat",
+    "zstdgrep": "/usr/local/bin/zstdgrep",
+    "zstdless": "/usr/local/bin/zstdless",
+    "zstdmt": "/usr/local/bin/zstdmt"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/o/orthodb:0.9.0--pyhdfd78af_0.json b/quay.io/biocontainers/o/orthodb:0.9.0--pyhdfd78af_0.json
new file mode 100644
index 0000000..eb3e814
--- /dev/null
+++ b/quay.io/biocontainers/o/orthodb:0.9.0--pyhdfd78af_0.json
@@ -0,0 +1,77 @@
+{
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "clear": "/usr/local/bin/clear",
+    "idle3": "/usr/local/bin/idle3",
+    "idle3.13": "/usr/local/bin/idle3.13",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "lzcat": "/usr/local/bin/lzcat",
+    "lzcmp": "/usr/local/bin/lzcmp",
+    "lzdiff": "/usr/local/bin/lzdiff",
+    "lzegrep": "/usr/local/bin/lzegrep",
+    "lzfgrep": "/usr/local/bin/lzfgrep",
+    "lzgrep": "/usr/local/bin/lzgrep",
+    "lzless": "/usr/local/bin/lzless",
+    "lzma": "/usr/local/bin/lzma",
+    "lzmadec": "/usr/local/bin/lzmadec",
+    "lzmainfo": "/usr/local/bin/lzmainfo",
+    "lzmore": "/usr/local/bin/lzmore",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "normalizer": "/usr/local/bin/normalizer",
+    "openssl": "/usr/local/bin/openssl",
+    "pip": "/usr/local/bin/pip",
+    "pip3": "/usr/local/bin/pip3",
+    "pydoc": "/usr/local/bin/pydoc",
+    "pydoc3": "/usr/local/bin/pydoc3",
+    "pydoc3.13": "/usr/local/bin/pydoc3.13",
+    "python": "/usr/local/bin/python",
+    "python3": "/usr/local/bin/python3",
+    "python3-config": "/usr/local/bin/python3-config",
+    "python3.1": "/usr/local/bin/python3.1",
+    "python3.13": "/usr/local/bin/python3.13",
+    "python3.13-config": "/usr/local/bin/python3.13-config",
+    "reset": "/usr/local/bin/reset",
+    "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
+    "tabs": "/usr/local/bin/tabs",
+    "tclsh": "/usr/local/bin/tclsh",
+    "tclsh8.6": "/usr/local/bin/tclsh8.6",
+    "tic": "/usr/local/bin/tic",
+    "toe": "/usr/local/bin/toe",
+    "tput": "/usr/local/bin/tput",
+    "tset": "/usr/local/bin/tset",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unxz": "/usr/local/bin/unxz",
+    "unzstd": "/usr/local/bin/unzstd",
+    "wish": "/usr/local/bin/wish",
+    "wish8.6": "/usr/local/bin/wish8.6",
+    "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
+    "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore",
+    "zstd": "/usr/local/bin/zstd",
+    "zstdcat": "/usr/local/bin/zstdcat",
+    "zstdgrep": "/usr/local/bin/zstdgrep",
+    "zstdless": "/usr/local/bin/zstdless",
+    "zstdmt": "/usr/local/bin/zstdmt"
+}
\ No newline at end of file