diff --git a/counts.json b/counts.json
index 8dc1c88..82abdb1 100644
--- a/counts.json
+++ b/counts.json
@@ -2326,15 +2326,15 @@
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@@ -9775,7 +9792,7 @@
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+    "x86_64-conda_cos6-linux-gnu-gcc-nm": 4168,
+    "x86_64-conda_cos6-linux-gnu-gcc-ranlib": 4168,
+    "x86_64-conda_cos6-linux-gnu-gcov": 4167,
+    "x86_64-conda_cos6-linux-gnu-gcov-dump": 4167,
+    "x86_64-conda_cos6-linux-gnu-gcov-tool": 4167,
+    "x86_64-conda_cos6-linux-gnu-gfortran": 4135,
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-    "x86_64-conda_cos6-linux-gnu-nm": 4170,
-    "x86_64-conda_cos6-linux-gnu-objcopy": 4170,
-    "x86_64-conda_cos6-linux-gnu-objdump": 4170,
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+    "x86_64-conda_cos6-linux-gnu-ld": 6526,
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+    "x86_64-conda_cos6-linux-gnu-ld.gold": 4171,
+    "x86_64-conda_cos6-linux-gnu-nm": 4171,
+    "x86_64-conda_cos6-linux-gnu-objcopy": 4171,
+    "x86_64-conda_cos6-linux-gnu-objdump": 4171,
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-    "x86_64-conda_cos6-linux-gnu-ranlib": 4170,
-    "x86_64-conda_cos6-linux-gnu-readelf": 4170,
-    "x86_64-conda_cos6-linux-gnu-size": 4170,
-    "x86_64-conda_cos6-linux-gnu-strings": 4170,
-    "x86_64-conda_cos6-linux-gnu-strip": 4170,
+    "x86_64-conda_cos6-linux-gnu-ranlib": 4171,
+    "x86_64-conda_cos6-linux-gnu-readelf": 4171,
+    "x86_64-conda_cos6-linux-gnu-size": 4171,
+    "x86_64-conda_cos6-linux-gnu-strings": 4171,
+    "x86_64-conda_cos6-linux-gnu-strip": 4171,
     "x86_64-conda_cos7-linux-gnu-ld": 24,
     "x86_64-unknown-linux-gnu-pkg-config": 1,
-    "xa2multi.pl": 162,
+    "xa2multi.pl": 163,
     "xaLeap": 7,
     "xam_coverage_bins.pl": 2,
     "xander_customized_hmmer_version_for_prepare_gene.sh": 1,
@@ -26958,7 +26999,7 @@
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     "xgboost.dll": 1,
     "xgboost.lib": 1,
-    "xgettext": 5324,
+    "xgettext": 5325,
     "xgui": 2,
     "xhmm": 1,
     "xinteract": 2,
@@ -26972,30 +27013,30 @@
     "xmfa2maf": 4,
     "xmfa2maf.pl": 1,
     "xml": 1,
-    "xml2-config": 5460,
+    "xml2-config": 5463,
     "xml2-config.bak": 34,
     "xml2dcm": 1,
     "xml2dsr": 1,
-    "xml2fsa": 229,
-    "xml2json": 229,
-    "xml2tbl": 302,
+    "xml2fsa": 230,
+    "xml2json": 230,
+    "xml2tbl": 303,
     "xml_grep": 64,
     "xml_merge": 64,
     "xml_pp": 64,
     "xml_spellcheck": 64,
     "xml_split": 64,
     "xml_to_bas.pl": 3,
-    "xmlcatalog": 5460,
+    "xmlcatalog": 5463,
     "xmlget": 23,
     "xmlindent": 1,
-    "xmllint": 5460,
+    "xmllint": 5463,
     "xmlpatterns": 256,
     "xmlpatterns-qt4": 3,
     "xmlpatternsvalidator": 256,
     "xmlpatternsvalidator-qt4": 3,
     "xmltext": 23,
     "xmlvalid": 1,
-    "xmlwf": 2413,
+    "xmlwf": 2414,
     "xparmed": 7,
     "xpath": 61,
     "xpclr": 1,
@@ -27007,7 +27048,7 @@
     "xpore": 1,
     "xpore-dataprep": 1,
     "xpore-diffmod": 1,
-    "xq": 299,
+    "xq": 300,
     "xrdacctest": 1,
     "xrdadler32": 1,
     "xrdcopy": 1,
@@ -27030,7 +27071,7 @@
     "xsltproc_lite": 7,
     "xstreme": 2,
     "xstreme_html_to_tsv": 2,
-    "xsubpp": 1747,
+    "xsubpp": 1750,
     "xsv": 1,
     "xtandem": 3,
     "xtb": 1,
@@ -27038,31 +27079,31 @@
     "xtea_hg19": 1,
     "xtea_long": 1,
     "xtermcolor": 2,
-    "xtract": 317,
-    "xtract.Linux": 229,
+    "xtract": 318,
+    "xtract.Linux": 230,
     "xtract.go": 15,
     "xtract.pl": 1,
     "xtractcol": 1,
     "xtractcolv": 1,
     "xtractore": 1,
     "xtractprotos": 4,
-    "xxh128sum": 37,
-    "xxh32sum": 37,
-    "xxh64sum": 37,
-    "xxhsum": 38,
+    "xxh128sum": 38,
+    "xxh32sum": 38,
+    "xxh64sum": 38,
+    "xxhsum": 39,
     "xy-plot": 88,
     "xyalign": 1,
     "xyz_sfetch": 1,
-    "xz": 7959,
-    "xzcat": 7734,
-    "xzcmp": 7734,
-    "xzdec": 7734,
-    "xzdiff": 7734,
-    "xzegrep": 7734,
-    "xzfgrep": 7734,
-    "xzgrep": 7734,
-    "xzless": 7734,
-    "xzmore": 7734,
+    "xz": 7966,
+    "xzcat": 7741,
+    "xzcmp": 7741,
+    "xzdec": 7741,
+    "xzdiff": 7741,
+    "xzegrep": 7741,
+    "xzfgrep": 7741,
+    "xzgrep": 7741,
+    "xzless": 7741,
+    "xzmore": 7741,
     "y2racc": 7,
     "yacc": 4,
     "yacht": 1,
@@ -27073,7 +27114,7 @@
     "yak": 2,
     "yaml2gff.1.4.pl": 15,
     "yaml2obj": 4,
-    "yaml2xml": 40,
+    "yaml2xml": 41,
     "yamllint": 1,
     "yamlpp5-events": 4,
     "yamlpp5-highlight": 4,
@@ -27097,35 +27138,35 @@
     "yoyo": 3,
     "yoyo-migrate": 3,
     "yplan": 1,
-    "yq": 299,
+    "yq": 300,
     "ytasm": 1,
     "yte": 68,
     "zagros": 1,
     "zamp": 1,
     "zarp": 1,
-    "zcat": 22,
-    "zcmp": 22,
+    "zcat": 23,
+    "zcmp": 23,
     "zdb": 1,
-    "zdiff": 22,
+    "zdiff": 23,
     "zdump": 45,
-    "zegrep": 22,
+    "zegrep": 23,
     "zenodo_get": 1,
     "zerone": 1,
     "zeta.r": 1,
     "zeta.r.bak": 1,
     "zff2genbank.pl": 1,
     "zff2gff3.pl": 2,
-    "zfgrep": 22,
-    "zforce": 22,
+    "zfgrep": 23,
+    "zforce": 23,
     "zfp": 29,
     "zga": 1,
-    "zgrep": 22,
+    "zgrep": 23,
     "zic": 45,
     "zip": 17,
     "zipHomerResults.pl": 5,
     "zipcloak": 3,
     "zipcmp": 97,
-    "zipdetails": 1747,
+    "zipdetails": 1750,
     "zipgrep": 25,
     "zipinfo": 25,
     "zipmerge": 97,
@@ -27135,12 +27176,12 @@
     "zless": 5,
     "zlib.net.dll": 4,
     "zlib_decompress": 5,
-    "zmore": 22,
+    "zmore": 23,
     "zmwfilter": 3,
-    "znew": 22,
+    "znew": 23,
     "zol": 2,
     "zoom": 1,
-    "zoom2sam.pl": 535,
+    "zoom2sam.pl": 536,
     "zopfli": 29,
     "zopflipng": 29,
     "zorro": 1,
@@ -27150,10 +27191,10 @@
     "zrun": 3,
     "zsh": 3,
     "zsh-5.8": 3,
-    "zstd": 5359,
-    "zstdcat": 5359,
-    "zstdgrep": 5157,
-    "zstdless": 5157,
-    "zstdmt": 5359,
+    "zstd": 5364,
+    "zstdcat": 5364,
+    "zstdgrep": 5162,
+    "zstdless": 5162,
+    "zstdmt": 5364,
     "ztr_dump": 2
 }
\ No newline at end of file
diff --git a/quay.io/biocontainers/a/absense:1.0.1--pyhdfd78af_0.json b/quay.io/biocontainers/a/absense:1.0.1--pyhdfd78af_0.json
new file mode 100644
index 0000000..a4a1a48
--- /dev/null
+++ b/quay.io/biocontainers/a/absense:1.0.1--pyhdfd78af_0.json
@@ -0,0 +1,130 @@
+{
+    "2to3": "/usr/local/bin/2to3",
+    "2to3-3.8": "/usr/local/bin/2to3-3.8",
+    "Plot_abSENSE.py": "/usr/local/bin/Plot_abSENSE.py",
+    "Run_abSENSE.py": "/usr/local/bin/Run_abSENSE.py",
+    "brotli": "/usr/local/bin/brotli",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "cjpeg": "/usr/local/bin/cjpeg",
+    "clear": "/usr/local/bin/clear",
+    "djpeg": "/usr/local/bin/djpeg",
+    "f2py": "/usr/local/bin/f2py",
+    "f2py3": "/usr/local/bin/f2py3",
+    "f2py3.8": "/usr/local/bin/f2py3.8",
+    "fax2ps": "/usr/local/bin/fax2ps",
+    "fax2tiff": "/usr/local/bin/fax2tiff",
+    "fonttools": "/usr/local/bin/fonttools",
+    "freetype-config": "/usr/local/bin/freetype-config",
+    "get_gprof": "/usr/local/bin/get_gprof",
+    "get_objgraph": "/usr/local/bin/get_objgraph",
+    "idle3": "/usr/local/bin/idle3",
+    "idle3.8": "/usr/local/bin/idle3.8",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "jpegtran": "/usr/local/bin/jpegtran",
+    "jpgicc": "/usr/local/bin/jpgicc",
+    "libdeflate-gunzip": "/usr/local/bin/libdeflate-gunzip",
+    "libdeflate-gzip": "/usr/local/bin/libdeflate-gzip",
+    "libpng-config": "/usr/local/bin/libpng-config",
+    "libpng16-config": "/usr/local/bin/libpng16-config",
+    "linkicc": "/usr/local/bin/linkicc",
+    "lzcat": "/usr/local/bin/lzcat",
+    "lzcmp": "/usr/local/bin/lzcmp",
+    "lzdiff": "/usr/local/bin/lzdiff",
+    "lzegrep": "/usr/local/bin/lzegrep",
+    "lzfgrep": "/usr/local/bin/lzfgrep",
+    "lzgrep": "/usr/local/bin/lzgrep",
+    "lzless": "/usr/local/bin/lzless",
+    "lzma": "/usr/local/bin/lzma",
+    "lzmadec": "/usr/local/bin/lzmadec",
+    "lzmainfo": "/usr/local/bin/lzmainfo",
+    "lzmore": "/usr/local/bin/lzmore",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "openssl": "/usr/local/bin/openssl",
+    "opj_compress": "/usr/local/bin/opj_compress",
+    "opj_decompress": "/usr/local/bin/opj_decompress",
+    "opj_dump": "/usr/local/bin/opj_dump",
+    "pal2rgb": "/usr/local/bin/pal2rgb",
+    "pip": "/usr/local/bin/pip",
+    "pip3": "/usr/local/bin/pip3",
+    "png-fix-itxt": "/usr/local/bin/png-fix-itxt",
+    "pngfix": "/usr/local/bin/pngfix",
+    "ppm2tiff": "/usr/local/bin/ppm2tiff",
+    "psicc": "/usr/local/bin/psicc",
+    "pydoc": "/usr/local/bin/pydoc",
+    "pydoc3": "/usr/local/bin/pydoc3",
+    "pydoc3.8": "/usr/local/bin/pydoc3.8",
+    "pyftmerge": "/usr/local/bin/pyftmerge",
+    "pyftsubset": "/usr/local/bin/pyftsubset",
+    "python": "/usr/local/bin/python",
+    "python3": "/usr/local/bin/python3",
+    "python3-config": "/usr/local/bin/python3-config",
+    "python3.8": "/usr/local/bin/python3.8",
+    "python3.8-config": "/usr/local/bin/python3.8-config",
+    "raw2tiff": "/usr/local/bin/raw2tiff",
+    "rdjpgcom": "/usr/local/bin/rdjpgcom",
+    "reset": "/usr/local/bin/reset",
+    "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
+    "tabs": "/usr/local/bin/tabs",
+    "tclsh": "/usr/local/bin/tclsh",
+    "tclsh8.6": "/usr/local/bin/tclsh8.6",
+    "tic": "/usr/local/bin/tic",
+    "tiff2bw": "/usr/local/bin/tiff2bw",
+    "tiff2pdf": "/usr/local/bin/tiff2pdf",
+    "tiff2ps": "/usr/local/bin/tiff2ps",
+    "tiff2rgba": "/usr/local/bin/tiff2rgba",
+    "tiffcmp": "/usr/local/bin/tiffcmp",
+    "tiffcp": "/usr/local/bin/tiffcp",
+    "tiffcrop": "/usr/local/bin/tiffcrop",
+    "tiffdither": "/usr/local/bin/tiffdither",
+    "tiffdump": "/usr/local/bin/tiffdump",
+    "tiffinfo": "/usr/local/bin/tiffinfo",
+    "tiffmedian": "/usr/local/bin/tiffmedian",
+    "tiffset": "/usr/local/bin/tiffset",
+    "tiffsplit": "/usr/local/bin/tiffsplit",
+    "tificc": "/usr/local/bin/tificc",
+    "tjbench": "/usr/local/bin/tjbench",
+    "toe": "/usr/local/bin/toe",
+    "tput": "/usr/local/bin/tput",
+    "transicc": "/usr/local/bin/transicc",
+    "tset": "/usr/local/bin/tset",
+    "ttx": "/usr/local/bin/ttx",
+    "undill": "/usr/local/bin/undill",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unxz": "/usr/local/bin/unxz",
+    "unzstd": "/usr/local/bin/unzstd",
+    "wheel": "/usr/local/bin/wheel",
+    "wish": "/usr/local/bin/wish",
+    "wish8.6": "/usr/local/bin/wish8.6",
+    "wrjpgcom": "/usr/local/bin/wrjpgcom",
+    "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
+    "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore",
+    "zstd": "/usr/local/bin/zstd",
+    "zstdcat": "/usr/local/bin/zstdcat",
+    "zstdgrep": "/usr/local/bin/zstdgrep",
+    "zstdless": "/usr/local/bin/zstdless",
+    "zstdmt": "/usr/local/bin/zstdmt"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/h/hifiadapterfilt:3.0.0--hdfd78af_0.json b/quay.io/biocontainers/h/hifiadapterfilt:3.0.0--hdfd78af_0.json
new file mode 100644
index 0000000..b95af47
--- /dev/null
+++ b/quay.io/biocontainers/h/hifiadapterfilt:3.0.0--hdfd78af_0.json
@@ -0,0 +1,336 @@
+{
+    "accn-at-a-time": "/usr/local/bin/accn-at-a-time",
+    "action_report.py": "/usr/local/bin/action_report.py",
+    "adig": "/usr/local/bin/adig",
+    "ahost": "/usr/local/bin/ahost",
+    "align-columns": "/usr/local/bin/align-columns",
+    "amino-acid-composition": "/usr/local/bin/amino-acid-composition",
+    "archive-ncbinlp": "/usr/local/bin/archive-ncbinlp",
+    "archive-nihocc": "/usr/local/bin/archive-nihocc",
+    "archive-nmcds": "/usr/local/bin/archive-nmcds",
+    "archive-pmc": "/usr/local/bin/archive-pmc",
+    "archive-pubmed": "/usr/local/bin/archive-pubmed",
+    "archive-taxonomy": "/usr/local/bin/archive-taxonomy",
+    "args2slice": "/usr/local/bin/args2slice",
+    "aria2c": "/usr/local/bin/aria2c",
+    "asn2ref": "/usr/local/bin/asn2ref",
+    "asn2xml": "/usr/local/bin/asn2xml",
+    "autopoint": "/usr/local/bin/autopoint",
+    "bamtools": "/usr/local/bin/bamtools",
+    "between-two-genes": "/usr/local/bin/between-two-genes",
+    "blast_formatter": "/usr/local/bin/blast_formatter",
+    "blast_names_mapping.tsv": "/usr/local/bin/blast_names_mapping.tsv",
+    "blastdb_aliastool": "/usr/local/bin/blastdb_aliastool",
+    "blastdbcheck": "/usr/local/bin/blastdbcheck",
+    "blastdbcmd": "/usr/local/bin/blastdbcmd",
+    "blastn": "/usr/local/bin/blastn",
+    "blastn_vdb": "/usr/local/bin/blastn_vdb",
+    "blastp": "/usr/local/bin/blastp",
+    "blastx": "/usr/local/bin/blastx",
+    "blst2gm": "/usr/local/bin/blst2gm",
+    "blst2tkns": "/usr/local/bin/blst2tkns",
+    "bsmp2info": "/usr/local/bin/bsmp2info",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "cit2pmid": "/usr/local/bin/cit2pmid",
+    "classify_taxonomy.py": "/usr/local/bin/classify_taxonomy.py",
+    "cleanup-blastdb-volumes.py": "/usr/local/bin/cleanup-blastdb-volumes.py",
+    "clear": "/usr/local/bin/clear",
+    "combine-uid-lists": "/usr/local/bin/combine-uid-lists",
+    "compile_et": "/usr/local/bin/compile_et",
+    "convert2blastmask": "/usr/local/bin/convert2blastmask",
+    "corelist": "/usr/local/bin/corelist",
+    "cpan": "/usr/local/bin/cpan",
+    "csv2xml": "/usr/local/bin/csv2xml",
+    "curl": "/usr/local/bin/curl",
+    "curl-config": "/usr/local/bin/curl-config",
+    "datatool": "/usr/local/bin/datatool",
+    "deltablast": "/usr/local/bin/deltablast",
+    "difference-uid-lists": "/usr/local/bin/difference-uid-lists",
+    "disambiguate-nucleotides": "/usr/local/bin/disambiguate-nucleotides",
+    "download-ncbi-data": "/usr/local/bin/download-ncbi-data",
+    "download-ncbi-software": "/usr/local/bin/download-ncbi-software",
+    "download-pmc": "/usr/local/bin/download-pmc",
+    "download-pubmed": "/usr/local/bin/download-pubmed",
+    "download-sequence": "/usr/local/bin/download-sequence",
+    "ds2pme": "/usr/local/bin/ds2pme",
+    "dustmasker": "/usr/local/bin/dustmasker",
+    "ecommon.sh": "/usr/local/bin/ecommon.sh",
+    "efetch": "/usr/local/bin/efetch",
+    "efilter": "/usr/local/bin/efilter",
+    "egrep": "/usr/local/bin/egrep",
+    "einfo": "/usr/local/bin/einfo",
+    "elink": "/usr/local/bin/elink",
+    "enc2xs": "/usr/local/bin/enc2xs",
+    "encguess": "/usr/local/bin/encguess",
+    "envsubst": "/usr/local/bin/envsubst",
+    "epost": "/usr/local/bin/epost",
+    "esample": "/usr/local/bin/esample",
+    "esearch": "/usr/local/bin/esearch",
+    "esummary": "/usr/local/bin/esummary",
+    "exclude-uid-lists": "/usr/local/bin/exclude-uid-lists",
+    "expand-current": "/usr/local/bin/expand-current",
+    "fetch-local": "/usr/local/bin/fetch-local",
+    "fetch-nmcds": "/usr/local/bin/fetch-nmcds",
+    "fetch-pmc": "/usr/local/bin/fetch-pmc",
+    "fetch-pubmed": "/usr/local/bin/fetch-pubmed",
+    "fetch-taxonomy": "/usr/local/bin/fetch-taxonomy",
+    "fgrep": "/usr/local/bin/fgrep",
+    "filter-columns": "/usr/local/bin/filter-columns",
+    "filter-genbank": "/usr/local/bin/filter-genbank",
+    "filter-record": "/usr/local/bin/filter-record",
+    "filter-stop-words": "/usr/local/bin/filter-stop-words",
+    "find-in-gene": "/usr/local/bin/find-in-gene",
+    "fsa2xml": "/usr/local/bin/fsa2xml",
+    "fuse-ranges": "/usr/local/bin/fuse-ranges",
+    "fuse-segments": "/usr/local/bin/fuse-segments",
+    "gbf2fsa": "/usr/local/bin/gbf2fsa",
+    "gbf2info": "/usr/local/bin/gbf2info",
+    "gbf2ref": "/usr/local/bin/gbf2ref",
+    "gbf2xml": "/usr/local/bin/gbf2xml",
+    "gene2range": "/usr/local/bin/gene2range",
+    "get_species_taxids.sh": "/usr/local/bin/get_species_taxids.sh",
+    "gettext": "/usr/local/bin/gettext",
+    "gettext.sh": "/usr/local/bin/gettext.sh",
+    "gettextize": "/usr/local/bin/gettextize",
+    "gm2ranges": "/usr/local/bin/gm2ranges",
+    "gm2segs": "/usr/local/bin/gm2segs",
+    "grep": "/usr/local/bin/grep",
+    "gss-client": "/usr/local/bin/gss-client",
+    "gunzip": "/usr/local/bin/gunzip",
+    "gx": "/usr/local/bin/gx",
+    "gzexe": "/usr/local/bin/gzexe",
+    "gzip": "/usr/local/bin/gzip",
+    "h2ph": "/usr/local/bin/h2ph",
+    "h2xs": "/usr/local/bin/h2xs",
+    "hgvs2spdi": "/usr/local/bin/hgvs2spdi",
+    "hifiadapterfilt.bib": "/usr/local/bin/hifiadapterfilt.bib",
+    "hifiadapterfilt.ris": "/usr/local/bin/hifiadapterfilt.ris",
+    "hifiadapterfilt.sh": "/usr/local/bin/hifiadapterfilt.sh",
+    "hifiadapterfiltFCS.sh": "/usr/local/bin/hifiadapterfiltFCS.sh",
+    "idle3": "/usr/local/bin/idle3",
+    "idle3.13": "/usr/local/bin/idle3.13",
+    "idn2": "/usr/local/bin/idn2",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "ini2xml": "/usr/local/bin/ini2xml",
+    "instmodsh": "/usr/local/bin/instmodsh",
+    "intersect-uid-lists": "/usr/local/bin/intersect-uid-lists",
+    "join-into-groups-of": "/usr/local/bin/join-into-groups-of",
+    "json2xml": "/usr/local/bin/json2xml",
+    "json_pp": "/usr/local/bin/json_pp",
+    "json_xs": "/usr/local/bin/json_xs",
+    "jsonl2xml": "/usr/local/bin/jsonl2xml",
+    "just-top-hits": "/usr/local/bin/just-top-hits",
+    "k5srvutil": "/usr/local/bin/k5srvutil",
+    "kadmin": "/usr/local/bin/kadmin",
+    "kdestroy": "/usr/local/bin/kdestroy",
+    "keyctl": "/usr/local/bin/keyctl",
+    "kinit": "/usr/local/bin/kinit",
+    "klist": "/usr/local/bin/klist",
+    "kpasswd": "/usr/local/bin/kpasswd",
+    "krb5-config": "/usr/local/bin/krb5-config",
+    "ksu": "/usr/local/bin/ksu",
+    "kswitch": "/usr/local/bin/kswitch",
+    "ktutil": "/usr/local/bin/ktutil",
+    "kvno": "/usr/local/bin/kvno",
+    "legacy_blast.pl": "/usr/local/bin/legacy_blast.pl",
+    "libnetcfg": "/usr/local/bin/libnetcfg",
+    "lzcat": "/usr/local/bin/lzcat",
+    "lzcmp": "/usr/local/bin/lzcmp",
+    "lzdiff": "/usr/local/bin/lzdiff",
+    "lzegrep": "/usr/local/bin/lzegrep",
+    "lzfgrep": "/usr/local/bin/lzfgrep",
+    "lzgrep": "/usr/local/bin/lzgrep",
+    "lzless": "/usr/local/bin/lzless",
+    "lzma": "/usr/local/bin/lzma",
+    "lzmadec": "/usr/local/bin/lzmadec",
+    "lzmainfo": "/usr/local/bin/lzmainfo",
+    "lzmore": "/usr/local/bin/lzmore",
+    "makeblastdb": "/usr/local/bin/makeblastdb",
+    "makembindex": "/usr/local/bin/makembindex",
+    "makeprofiledb": "/usr/local/bin/makeprofiledb",
+    "msgattrib": "/usr/local/bin/msgattrib",
+    "msgcat": "/usr/local/bin/msgcat",
+    "msgcmp": "/usr/local/bin/msgcmp",
+    "msgcomm": "/usr/local/bin/msgcomm",
+    "msgconv": "/usr/local/bin/msgconv",
+    "msgen": "/usr/local/bin/msgen",
+    "msgexec": "/usr/local/bin/msgexec",
+    "msgfilter": "/usr/local/bin/msgfilter",
+    "msgfmt": "/usr/local/bin/msgfmt",
+    "msggrep": "/usr/local/bin/msggrep",
+    "msginit": "/usr/local/bin/msginit",
+    "msgmerge": "/usr/local/bin/msgmerge",
+    "msgunfmt": "/usr/local/bin/msgunfmt",
+    "msguniq": "/usr/local/bin/msguniq",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "ngettext": "/usr/local/bin/ngettext",
+    "nghttp": "/usr/local/bin/nghttp",
+    "nghttpd": "/usr/local/bin/nghttpd",
+    "nghttpx": "/usr/local/bin/nghttpx",
+    "nhance.sh": "/usr/local/bin/nhance.sh",
+    "nquire": "/usr/local/bin/nquire",
+    "openssl": "/usr/local/bin/openssl",
+    "pbadapterfilt.sh": "/usr/local/bin/pbadapterfilt.sh",
+    "pcre2-config": "/usr/local/bin/pcre2-config",
+    "pcre2grep": "/usr/local/bin/pcre2grep",
+    "pcre2test": "/usr/local/bin/pcre2test",
+    "perl": "/usr/local/bin/perl",
+    "perl5.32.1": "/usr/local/bin/perl5.32.1",
+    "perlbug": "/usr/local/bin/perlbug",
+    "perldoc": "/usr/local/bin/perldoc",
+    "perlivp": "/usr/local/bin/perlivp",
+    "perlthanks": "/usr/local/bin/perlthanks",
+    "phrase-search": "/usr/local/bin/phrase-search",
+    "piconv": "/usr/local/bin/piconv",
+    "pigz": "/usr/local/bin/pigz",
+    "pip": "/usr/local/bin/pip",
+    "pip3": "/usr/local/bin/pip3",
+    "pl2pm": "/usr/local/bin/pl2pm",
+    "pma2apa": "/usr/local/bin/pma2apa",
+    "pma2pme": "/usr/local/bin/pma2pme",
+    "pmc2bioc": "/usr/local/bin/pmc2bioc",
+    "pmc2info": "/usr/local/bin/pmc2info",
+    "pod2html": "/usr/local/bin/pod2html",
+    "pod2man": "/usr/local/bin/pod2man",
+    "pod2text": "/usr/local/bin/pod2text",
+    "pod2usage": "/usr/local/bin/pod2usage",
+    "podchecker": "/usr/local/bin/podchecker",
+    "print-columns": "/usr/local/bin/print-columns",
+    "project_tree_builder": "/usr/local/bin/project_tree_builder",
+    "prove": "/usr/local/bin/prove",
+    "psiblast": "/usr/local/bin/psiblast",
+    "ptar": "/usr/local/bin/ptar",
+    "ptardiff": "/usr/local/bin/ptardiff",
+    "ptargrep": "/usr/local/bin/ptargrep",
+    "pv": "/usr/local/bin/pv",
+    "pydoc": "/usr/local/bin/pydoc",
+    "pydoc3": "/usr/local/bin/pydoc3",
+    "pydoc3.13": "/usr/local/bin/pydoc3.13",
+    "python": "/usr/local/bin/python",
+    "python3": "/usr/local/bin/python3",
+    "python3-config": "/usr/local/bin/python3-config",
+    "python3.1": "/usr/local/bin/python3.1",
+    "python3.13": "/usr/local/bin/python3.13",
+    "python3.13-config": "/usr/local/bin/python3.13-config",
+    "quote-grouped-elements": "/usr/local/bin/quote-grouped-elements",
+    "rchive": "/usr/local/bin/rchive",
+    "rchive.Linux": "/usr/local/bin/rchive.Linux",
+    "rclone": "/usr/local/bin/rclone",
+    "recode-sr-latin": "/usr/local/bin/recode-sr-latin",
+    "ref2pmid": "/usr/local/bin/ref2pmid",
+    "refseq-nm-cds": "/usr/local/bin/refseq-nm-cds",
+    "reorder-columns": "/usr/local/bin/reorder-columns",
+    "reset": "/usr/local/bin/reset",
+    "rpsblast": "/usr/local/bin/rpsblast",
+    "rpsbproc": "/usr/local/bin/rpsbproc",
+    "rpstblastn": "/usr/local/bin/rpstblastn",
+    "run-ncbi-converter": "/usr/local/bin/run-ncbi-converter",
+    "run_gx.py": "/usr/local/bin/run_gx.py",
+    "run_with_lock": "/usr/local/bin/run_with_lock",
+    "sclient": "/usr/local/bin/sclient",
+    "scn2xml": "/usr/local/bin/scn2xml",
+    "segmasker": "/usr/local/bin/segmasker",
+    "shasum": "/usr/local/bin/shasum",
+    "sim_client": "/usr/local/bin/sim_client",
+    "skip-if-file-exists": "/usr/local/bin/skip-if-file-exists",
+    "snp2hgvs": "/usr/local/bin/snp2hgvs",
+    "snp2tbl": "/usr/local/bin/snp2tbl",
+    "sort-table": "/usr/local/bin/sort-table",
+    "sort-uniq-count": "/usr/local/bin/sort-uniq-count",
+    "sort-uniq-count-rank": "/usr/local/bin/sort-uniq-count-rank",
+    "spdi2tbl": "/usr/local/bin/spdi2tbl",
+    "splain": "/usr/local/bin/splain",
+    "split-at-intron": "/usr/local/bin/split-at-intron",
+    "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
+    "stream-local": "/usr/local/bin/stream-local",
+    "stream-pubmed": "/usr/local/bin/stream-pubmed",
+    "streamzip": "/usr/local/bin/streamzip",
+    "sync_files.py": "/usr/local/bin/sync_files.py",
+    "systematic-mutations": "/usr/local/bin/systematic-mutations",
+    "tabs": "/usr/local/bin/tabs",
+    "tbl2prod": "/usr/local/bin/tbl2prod",
+    "tbl2xml": "/usr/local/bin/tbl2xml",
+    "tblastn": "/usr/local/bin/tblastn",
+    "tblastn_vdb": "/usr/local/bin/tblastn_vdb",
+    "tblastx": "/usr/local/bin/tblastx",
+    "tclsh": "/usr/local/bin/tclsh",
+    "tclsh8.6": "/usr/local/bin/tclsh8.6",
+    "test-edirect": "/usr/local/bin/test-edirect",
+    "test-eutils": "/usr/local/bin/test-eutils",
+    "test-pmc-index": "/usr/local/bin/test-pmc-index",
+    "test-pubmed-index": "/usr/local/bin/test-pubmed-index",
+    "test_pcre": "/usr/local/bin/test_pcre",
+    "tic": "/usr/local/bin/tic",
+    "toe": "/usr/local/bin/toe",
+    "toml2xml": "/usr/local/bin/toml2xml",
+    "tput": "/usr/local/bin/tput",
+    "transmute": "/usr/local/bin/transmute",
+    "transmute.Linux": "/usr/local/bin/transmute.Linux",
+    "tset": "/usr/local/bin/tset",
+    "uncompress": "/usr/local/bin/uncompress",
+    "uniq-table": "/usr/local/bin/uniq-table",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unpigz": "/usr/local/bin/unpigz",
+    "unxz": "/usr/local/bin/unxz",
+    "unzstd": "/usr/local/bin/unzstd",
+    "update_blastdb.pl": "/usr/local/bin/update_blastdb.pl",
+    "uuclient": "/usr/local/bin/uuclient",
+    "wget": "/usr/local/bin/wget",
+    "windowmasker": "/usr/local/bin/windowmasker",
+    "windowmasker_2.2.22_adapter.py": "/usr/local/bin/windowmasker_2.2.22_adapter.py",
+    "wish": "/usr/local/bin/wish",
+    "wish8.6": "/usr/local/bin/wish8.6",
+    "word-at-a-time": "/usr/local/bin/word-at-a-time",
+    "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
+    "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
+    "xgettext": "/usr/local/bin/xgettext",
+    "xml2-config": "/usr/local/bin/xml2-config",
+    "xml2fsa": "/usr/local/bin/xml2fsa",
+    "xml2json": "/usr/local/bin/xml2json",
+    "xml2tbl": "/usr/local/bin/xml2tbl",
+    "xmlcatalog": "/usr/local/bin/xmlcatalog",
+    "xmllint": "/usr/local/bin/xmllint",
+    "xsubpp": "/usr/local/bin/xsubpp",
+    "xtract": "/usr/local/bin/xtract",
+    "xtract.Linux": "/usr/local/bin/xtract.Linux",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore",
+    "yaml2xml": "/usr/local/bin/yaml2xml",
+    "zcat": "/usr/local/bin/zcat",
+    "zcmp": "/usr/local/bin/zcmp",
+    "zdiff": "/usr/local/bin/zdiff",
+    "zegrep": "/usr/local/bin/zegrep",
+    "zfgrep": "/usr/local/bin/zfgrep",
+    "zforce": "/usr/local/bin/zforce",
+    "zgrep": "/usr/local/bin/zgrep",
+    "zipdetails": "/usr/local/bin/zipdetails",
+    "zmore": "/usr/local/bin/zmore",
+    "znew": "/usr/local/bin/znew",
+    "zstd": "/usr/local/bin/zstd",
+    "zstdcat": "/usr/local/bin/zstdcat",
+    "zstdgrep": "/usr/local/bin/zstdgrep",
+    "zstdless": "/usr/local/bin/zstdless",
+    "zstdmt": "/usr/local/bin/zstdmt"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/l/lrge:0.1.1--h53be72d_0.json b/quay.io/biocontainers/l/lrge:0.1.1--h53be72d_0.json
new file mode 100644
index 0000000..7066c83
--- /dev/null
+++ b/quay.io/biocontainers/l/lrge:0.1.1--h53be72d_0.json
@@ -0,0 +1,3 @@
+{
+    "lrge": "/usr/local/bin/lrge"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/n/ntsm:1.2.1--hdcf5f25_0.json b/quay.io/biocontainers/n/ntsm:1.2.1--hdcf5f25_0.json
new file mode 100644
index 0000000..f422acc
--- /dev/null
+++ b/quay.io/biocontainers/n/ntsm:1.2.1--hdcf5f25_0.json
@@ -0,0 +1,169 @@
+{
+    "ace2sam": "/usr/local/bin/ace2sam",
+    "adig": "/usr/local/bin/adig",
+    "ahost": "/usr/local/bin/ahost",
+    "annot-tsv": "/usr/local/bin/annot-tsv",
+    "bgzip": "/usr/local/bin/bgzip",
+    "blast2sam.pl": "/usr/local/bin/blast2sam.pl",
+    "bowtie2sam.pl": "/usr/local/bin/bowtie2sam.pl",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bwa": "/usr/local/bin/bwa",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "clear": "/usr/local/bin/clear",
+    "compile_et": "/usr/local/bin/compile_et",
+    "corelist": "/usr/local/bin/corelist",
+    "cpan": "/usr/local/bin/cpan",
+    "curl-config": "/usr/local/bin/curl-config",
+    "enc2xs": "/usr/local/bin/enc2xs",
+    "encguess": "/usr/local/bin/encguess",
+    "export2sam.pl": "/usr/local/bin/export2sam.pl",
+    "f2py": "/usr/local/bin/f2py",
+    "faidx": "/usr/local/bin/faidx",
+    "fasta-sanitize.pl": "/usr/local/bin/fasta-sanitize.pl",
+    "gss-client": "/usr/local/bin/gss-client",
+    "h2ph": "/usr/local/bin/h2ph",
+    "h2xs": "/usr/local/bin/h2xs",
+    "htsfile": "/usr/local/bin/htsfile",
+    "idle3": "/usr/local/bin/idle3",
+    "idle3.13": "/usr/local/bin/idle3.13",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "instmodsh": "/usr/local/bin/instmodsh",
+    "interpolate_sam.pl": "/usr/local/bin/interpolate_sam.pl",
+    "json_pp": "/usr/local/bin/json_pp",
+    "k5srvutil": "/usr/local/bin/k5srvutil",
+    "kadmin": "/usr/local/bin/kadmin",
+    "kdestroy": "/usr/local/bin/kdestroy",
+    "keyctl": "/usr/local/bin/keyctl",
+    "kinit": "/usr/local/bin/kinit",
+    "klist": "/usr/local/bin/klist",
+    "kpasswd": "/usr/local/bin/kpasswd",
+    "krb5-config": "/usr/local/bin/krb5-config",
+    "ksu": "/usr/local/bin/ksu",
+    "kswitch": "/usr/local/bin/kswitch",
+    "ktutil": "/usr/local/bin/ktutil",
+    "kvno": "/usr/local/bin/kvno",
+    "libdeflate-gunzip": "/usr/local/bin/libdeflate-gunzip",
+    "libdeflate-gzip": "/usr/local/bin/libdeflate-gzip",
+    "libnetcfg": "/usr/local/bin/libnetcfg",
+    "lzcat": "/usr/local/bin/lzcat",
+    "lzcmp": "/usr/local/bin/lzcmp",
+    "lzdiff": "/usr/local/bin/lzdiff",
+    "lzegrep": "/usr/local/bin/lzegrep",
+    "lzfgrep": "/usr/local/bin/lzfgrep",
+    "lzgrep": "/usr/local/bin/lzgrep",
+    "lzless": "/usr/local/bin/lzless",
+    "lzma": "/usr/local/bin/lzma",
+    "lzmadec": "/usr/local/bin/lzmadec",
+    "lzmainfo": "/usr/local/bin/lzmainfo",
+    "lzmore": "/usr/local/bin/lzmore",
+    "make": "/usr/local/bin/make",
+    "maq2sam-long": "/usr/local/bin/maq2sam-long",
+    "maq2sam-short": "/usr/local/bin/maq2sam-short",
+    "md5fa": "/usr/local/bin/md5fa",
+    "md5sum-lite": "/usr/local/bin/md5sum-lite",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "nghttp": "/usr/local/bin/nghttp",
+    "nghttpd": "/usr/local/bin/nghttpd",
+    "nghttpx": "/usr/local/bin/nghttpx",
+    "novo2sam.pl": "/usr/local/bin/novo2sam.pl",
+    "ntsmCount": "/usr/local/bin/ntsmCount",
+    "ntsmEval": "/usr/local/bin/ntsmEval",
+    "ntsmSiteGen": "/usr/local/bin/ntsmSiteGen",
+    "ntsmVCF": "/usr/local/bin/ntsmVCF",
+    "numpy-config": "/usr/local/bin/numpy-config",
+    "openssl": "/usr/local/bin/openssl",
+    "perl": "/usr/local/bin/perl",
+    "perl5.32.1": "/usr/local/bin/perl5.32.1",
+    "perlbug": "/usr/local/bin/perlbug",
+    "perldoc": "/usr/local/bin/perldoc",
+    "perlivp": "/usr/local/bin/perlivp",
+    "perlthanks": "/usr/local/bin/perlthanks",
+    "piconv": "/usr/local/bin/piconv",
+    "pip": "/usr/local/bin/pip",
+    "pip3": "/usr/local/bin/pip3",
+    "pl2pm": "/usr/local/bin/pl2pm",
+    "plot-ampliconstats": "/usr/local/bin/plot-ampliconstats",
+    "plot-bamstats": "/usr/local/bin/plot-bamstats",
+    "pod2html": "/usr/local/bin/pod2html",
+    "pod2man": "/usr/local/bin/pod2man",
+    "pod2text": "/usr/local/bin/pod2text",
+    "pod2usage": "/usr/local/bin/pod2usage",
+    "podchecker": "/usr/local/bin/podchecker",
+    "prove": "/usr/local/bin/prove",
+    "psl2sam.pl": "/usr/local/bin/psl2sam.pl",
+    "ptar": "/usr/local/bin/ptar",
+    "ptardiff": "/usr/local/bin/ptardiff",
+    "ptargrep": "/usr/local/bin/ptargrep",
+    "pydoc": "/usr/local/bin/pydoc",
+    "pydoc3": "/usr/local/bin/pydoc3",
+    "pydoc3.13": "/usr/local/bin/pydoc3.13",
+    "python": "/usr/local/bin/python",
+    "python3": "/usr/local/bin/python3",
+    "python3-config": "/usr/local/bin/python3-config",
+    "python3.1": "/usr/local/bin/python3.1",
+    "python3.13": "/usr/local/bin/python3.13",
+    "python3.13-config": "/usr/local/bin/python3.13-config",
+    "qualfa2fq.pl": "/usr/local/bin/qualfa2fq.pl",
+    "reset": "/usr/local/bin/reset",
+    "sam2vcf.pl": "/usr/local/bin/sam2vcf.pl",
+    "samtools": "/usr/local/bin/samtools",
+    "samtools.pl": "/usr/local/bin/samtools.pl",
+    "sclient": "/usr/local/bin/sclient",
+    "seq_cache_populate.pl": "/usr/local/bin/seq_cache_populate.pl",
+    "shasum": "/usr/local/bin/shasum",
+    "sim_client": "/usr/local/bin/sim_client",
+    "soap2sam.pl": "/usr/local/bin/soap2sam.pl",
+    "splain": "/usr/local/bin/splain",
+    "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
+    "streamzip": "/usr/local/bin/streamzip",
+    "tabix": "/usr/local/bin/tabix",
+    "tabs": "/usr/local/bin/tabs",
+    "tclsh": "/usr/local/bin/tclsh",
+    "tclsh8.6": "/usr/local/bin/tclsh8.6",
+    "tic": "/usr/local/bin/tic",
+    "toe": "/usr/local/bin/toe",
+    "tput": "/usr/local/bin/tput",
+    "tset": "/usr/local/bin/tset",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unxz": "/usr/local/bin/unxz",
+    "unzstd": "/usr/local/bin/unzstd",
+    "uuclient": "/usr/local/bin/uuclient",
+    "wgsim": "/usr/local/bin/wgsim",
+    "wgsim_eval.pl": "/usr/local/bin/wgsim_eval.pl",
+    "wish": "/usr/local/bin/wish",
+    "wish8.6": "/usr/local/bin/wish8.6",
+    "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
+    "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
+    "xa2multi.pl": "/usr/local/bin/xa2multi.pl",
+    "xsubpp": "/usr/local/bin/xsubpp",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore",
+    "zipdetails": "/usr/local/bin/zipdetails",
+    "zoom2sam.pl": "/usr/local/bin/zoom2sam.pl",
+    "zstd": "/usr/local/bin/zstd",
+    "zstdcat": "/usr/local/bin/zstdcat",
+    "zstdgrep": "/usr/local/bin/zstdgrep",
+    "zstdless": "/usr/local/bin/zstdless",
+    "zstdmt": "/usr/local/bin/zstdmt"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/p/phyclone:0.5.1--pyhdfd78af_0.json b/quay.io/biocontainers/p/phyclone:0.5.1--pyhdfd78af_0.json
new file mode 100644
index 0000000..6600a66
--- /dev/null
+++ b/quay.io/biocontainers/p/phyclone:0.5.1--pyhdfd78af_0.json
@@ -0,0 +1,81 @@
+{
+    "2to3": "/usr/local/bin/2to3",
+    "2to3-3.12": "/usr/local/bin/2to3-3.12",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "clear": "/usr/local/bin/clear",
+    "f2py": "/usr/local/bin/f2py",
+    "idle3": "/usr/local/bin/idle3",
+    "idle3.12": "/usr/local/bin/idle3.12",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "lzcat": "/usr/local/bin/lzcat",
+    "lzcmp": "/usr/local/bin/lzcmp",
+    "lzdiff": "/usr/local/bin/lzdiff",
+    "lzegrep": "/usr/local/bin/lzegrep",
+    "lzfgrep": "/usr/local/bin/lzfgrep",
+    "lzgrep": "/usr/local/bin/lzgrep",
+    "lzless": "/usr/local/bin/lzless",
+    "lzma": "/usr/local/bin/lzma",
+    "lzmadec": "/usr/local/bin/lzmadec",
+    "lzmainfo": "/usr/local/bin/lzmainfo",
+    "lzmore": "/usr/local/bin/lzmore",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "numba": "/usr/local/bin/numba",
+    "numpy-config": "/usr/local/bin/numpy-config",
+    "openssl": "/usr/local/bin/openssl",
+    "phyclone": "/usr/local/bin/phyclone",
+    "pip": "/usr/local/bin/pip",
+    "pip3": "/usr/local/bin/pip3",
+    "pydoc": "/usr/local/bin/pydoc",
+    "pydoc3": "/usr/local/bin/pydoc3",
+    "pydoc3.12": "/usr/local/bin/pydoc3.12",
+    "python": "/usr/local/bin/python",
+    "python3": "/usr/local/bin/python3",
+    "python3-config": "/usr/local/bin/python3-config",
+    "python3.1": "/usr/local/bin/python3.1",
+    "python3.12": "/usr/local/bin/python3.12",
+    "python3.12-config": "/usr/local/bin/python3.12-config",
+    "reset": "/usr/local/bin/reset",
+    "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
+    "tabs": "/usr/local/bin/tabs",
+    "tclsh": "/usr/local/bin/tclsh",
+    "tclsh8.6": "/usr/local/bin/tclsh8.6",
+    "tic": "/usr/local/bin/tic",
+    "toe": "/usr/local/bin/toe",
+    "tput": "/usr/local/bin/tput",
+    "tset": "/usr/local/bin/tset",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unxz": "/usr/local/bin/unxz",
+    "wheel": "/usr/local/bin/wheel",
+    "wish": "/usr/local/bin/wish",
+    "wish8.6": "/usr/local/bin/wish8.6",
+    "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
+    "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
+    "xxh128sum": "/usr/local/bin/xxh128sum",
+    "xxh32sum": "/usr/local/bin/xxh32sum",
+    "xxh64sum": "/usr/local/bin/xxh64sum",
+    "xxhsum": "/usr/local/bin/xxhsum",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/s/snp2cell:0.2.0--pyhdfd78af_0.json b/quay.io/biocontainers/s/snp2cell:0.2.0--pyhdfd78af_0.json
new file mode 100644
index 0000000..ffd1660
--- /dev/null
+++ b/quay.io/biocontainers/s/snp2cell:0.2.0--pyhdfd78af_0.json
@@ -0,0 +1,211 @@
+{
+    "2to3": "/usr/local/bin/2to3",
+    "2to3-3.11": "/usr/local/bin/2to3-3.11",
+    "adig": "/usr/local/bin/adig",
+    "ahost": "/usr/local/bin/ahost",
+    "brotli": "/usr/local/bin/brotli",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "cjpeg": "/usr/local/bin/cjpeg",
+    "clear": "/usr/local/bin/clear",
+    "compile_et": "/usr/local/bin/compile_et",
+    "curl-config": "/usr/local/bin/curl-config",
+    "djpeg": "/usr/local/bin/djpeg",
+    "f2py": "/usr/local/bin/f2py",
+    "fax2ps": "/usr/local/bin/fax2ps",
+    "fax2tiff": "/usr/local/bin/fax2tiff",
+    "fonttools": "/usr/local/bin/fonttools",
+    "freetype-config": "/usr/local/bin/freetype-config",
+    "futurize": "/usr/local/bin/futurize",
+    "get_gprof": "/usr/local/bin/get_gprof",
+    "get_objgraph": "/usr/local/bin/get_objgraph",
+    "gif2h5": "/usr/local/bin/gif2h5",
+    "gss-client": "/usr/local/bin/gss-client",
+    "h52gif": "/usr/local/bin/h52gif",
+    "h5c++": "/usr/local/bin/h5c++",
+    "h5cc": "/usr/local/bin/h5cc",
+    "h5clear": "/usr/local/bin/h5clear",
+    "h5copy": "/usr/local/bin/h5copy",
+    "h5debug": "/usr/local/bin/h5debug",
+    "h5delete": "/usr/local/bin/h5delete",
+    "h5diff": "/usr/local/bin/h5diff",
+    "h5dump": "/usr/local/bin/h5dump",
+    "h5fc": "/usr/local/bin/h5fc",
+    "h5format_convert": "/usr/local/bin/h5format_convert",
+    "h5fuse.sh": "/usr/local/bin/h5fuse.sh",
+    "h5import": "/usr/local/bin/h5import",
+    "h5jam": "/usr/local/bin/h5jam",
+    "h5ls": "/usr/local/bin/h5ls",
+    "h5mkgrp": "/usr/local/bin/h5mkgrp",
+    "h5perf_serial": "/usr/local/bin/h5perf_serial",
+    "h5redeploy": "/usr/local/bin/h5redeploy",
+    "h5repack": "/usr/local/bin/h5repack",
+    "h5repart": "/usr/local/bin/h5repart",
+    "h5stat": "/usr/local/bin/h5stat",
+    "h5tools_test_utils": "/usr/local/bin/h5tools_test_utils",
+    "h5unjam": "/usr/local/bin/h5unjam",
+    "h5watch": "/usr/local/bin/h5watch",
+    "hwloc-annotate": "/usr/local/bin/hwloc-annotate",
+    "hwloc-bind": "/usr/local/bin/hwloc-bind",
+    "hwloc-calc": "/usr/local/bin/hwloc-calc",
+    "hwloc-compress-dir": "/usr/local/bin/hwloc-compress-dir",
+    "hwloc-diff": "/usr/local/bin/hwloc-diff",
+    "hwloc-distrib": "/usr/local/bin/hwloc-distrib",
+    "hwloc-gather-cpuid": "/usr/local/bin/hwloc-gather-cpuid",
+    "hwloc-gather-topology": "/usr/local/bin/hwloc-gather-topology",
+    "hwloc-info": "/usr/local/bin/hwloc-info",
+    "hwloc-ls": "/usr/local/bin/hwloc-ls",
+    "hwloc-patch": "/usr/local/bin/hwloc-patch",
+    "hwloc-ps": "/usr/local/bin/hwloc-ps",
+    "idle3": "/usr/local/bin/idle3",
+    "idle3.11": "/usr/local/bin/idle3.11",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "jpegtran": "/usr/local/bin/jpegtran",
+    "jpgicc": "/usr/local/bin/jpgicc",
+    "k5srvutil": "/usr/local/bin/k5srvutil",
+    "kadmin": "/usr/local/bin/kadmin",
+    "kdestroy": "/usr/local/bin/kdestroy",
+    "keyctl": "/usr/local/bin/keyctl",
+    "kinit": "/usr/local/bin/kinit",
+    "klist": "/usr/local/bin/klist",
+    "kpasswd": "/usr/local/bin/kpasswd",
+    "krb5-config": "/usr/local/bin/krb5-config",
+    "ksu": "/usr/local/bin/ksu",
+    "kswitch": "/usr/local/bin/kswitch",
+    "ktutil": "/usr/local/bin/ktutil",
+    "kvno": "/usr/local/bin/kvno",
+    "libdeflate-gunzip": "/usr/local/bin/libdeflate-gunzip",
+    "libdeflate-gzip": "/usr/local/bin/libdeflate-gzip",
+    "libpng-config": "/usr/local/bin/libpng-config",
+    "libpng16-config": "/usr/local/bin/libpng16-config",
+    "linkicc": "/usr/local/bin/linkicc",
+    "lstopo": "/usr/local/bin/lstopo",
+    "lstopo-no-graphics": "/usr/local/bin/lstopo-no-graphics",
+    "lzcat": "/usr/local/bin/lzcat",
+    "lzcmp": "/usr/local/bin/lzcmp",
+    "lzdiff": "/usr/local/bin/lzdiff",
+    "lzegrep": "/usr/local/bin/lzegrep",
+    "lzfgrep": "/usr/local/bin/lzfgrep",
+    "lzgrep": "/usr/local/bin/lzgrep",
+    "lzless": "/usr/local/bin/lzless",
+    "lzma": "/usr/local/bin/lzma",
+    "lzmadec": "/usr/local/bin/lzmadec",
+    "lzmainfo": "/usr/local/bin/lzmainfo",
+    "lzmore": "/usr/local/bin/lzmore",
+    "markdown-it": "/usr/local/bin/markdown-it",
+    "natsort": "/usr/local/bin/natsort",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "nghttp": "/usr/local/bin/nghttp",
+    "nghttpd": "/usr/local/bin/nghttpd",
+    "nghttpx": "/usr/local/bin/nghttpx",
+    "normalizer": "/usr/local/bin/normalizer",
+    "numba": "/usr/local/bin/numba",
+    "numpy-config": "/usr/local/bin/numpy-config",
+    "openssl": "/usr/local/bin/openssl",
+    "opj_compress": "/usr/local/bin/opj_compress",
+    "opj_decompress": "/usr/local/bin/opj_decompress",
+    "opj_dump": "/usr/local/bin/opj_dump",
+    "pal2rgb": "/usr/local/bin/pal2rgb",
+    "pasteurize": "/usr/local/bin/pasteurize",
+    "pip": "/usr/local/bin/pip",
+    "pip3": "/usr/local/bin/pip3",
+    "png-fix-itxt": "/usr/local/bin/png-fix-itxt",
+    "pngfix": "/usr/local/bin/pngfix",
+    "ppm2tiff": "/usr/local/bin/ppm2tiff",
+    "psicc": "/usr/local/bin/psicc",
+    "pydoc": "/usr/local/bin/pydoc",
+    "pydoc3": "/usr/local/bin/pydoc3",
+    "pydoc3.11": "/usr/local/bin/pydoc3.11",
+    "pyftmerge": "/usr/local/bin/pyftmerge",
+    "pyftsubset": "/usr/local/bin/pyftsubset",
+    "pygmentize": "/usr/local/bin/pygmentize",
+    "python": "/usr/local/bin/python",
+    "python3": "/usr/local/bin/python3",
+    "python3-config": "/usr/local/bin/python3-config",
+    "python3.1": "/usr/local/bin/python3.1",
+    "python3.11": "/usr/local/bin/python3.11",
+    "python3.11-config": "/usr/local/bin/python3.11-config",
+    "qconvex": "/usr/local/bin/qconvex",
+    "qdelaunay": "/usr/local/bin/qdelaunay",
+    "qhalf": "/usr/local/bin/qhalf",
+    "qhull": "/usr/local/bin/qhull",
+    "qvoronoi": "/usr/local/bin/qvoronoi",
+    "raw2tiff": "/usr/local/bin/raw2tiff",
+    "rbox": "/usr/local/bin/rbox",
+    "rdjpgcom": "/usr/local/bin/rdjpgcom",
+    "reset": "/usr/local/bin/reset",
+    "scanpy": "/usr/local/bin/scanpy",
+    "sclient": "/usr/local/bin/sclient",
+    "sim_client": "/usr/local/bin/sim_client",
+    "snp2cell": "/usr/local/bin/snp2cell",
+    "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
+    "tabs": "/usr/local/bin/tabs",
+    "tabulate": "/usr/local/bin/tabulate",
+    "tclsh": "/usr/local/bin/tclsh",
+    "tclsh8.6": "/usr/local/bin/tclsh8.6",
+    "tic": "/usr/local/bin/tic",
+    "tiff2bw": "/usr/local/bin/tiff2bw",
+    "tiff2pdf": "/usr/local/bin/tiff2pdf",
+    "tiff2ps": "/usr/local/bin/tiff2ps",
+    "tiff2rgba": "/usr/local/bin/tiff2rgba",
+    "tiffcmp": "/usr/local/bin/tiffcmp",
+    "tiffcp": "/usr/local/bin/tiffcp",
+    "tiffcrop": "/usr/local/bin/tiffcrop",
+    "tiffdither": "/usr/local/bin/tiffdither",
+    "tiffdump": "/usr/local/bin/tiffdump",
+    "tiffinfo": "/usr/local/bin/tiffinfo",
+    "tiffmedian": "/usr/local/bin/tiffmedian",
+    "tiffset": "/usr/local/bin/tiffset",
+    "tiffsplit": "/usr/local/bin/tiffsplit",
+    "tificc": "/usr/local/bin/tificc",
+    "tjbench": "/usr/local/bin/tjbench",
+    "toe": "/usr/local/bin/toe",
+    "tput": "/usr/local/bin/tput",
+    "tqdm": "/usr/local/bin/tqdm",
+    "transicc": "/usr/local/bin/transicc",
+    "tset": "/usr/local/bin/tset",
+    "ttx": "/usr/local/bin/ttx",
+    "typer": "/usr/local/bin/typer",
+    "undill": "/usr/local/bin/undill",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unxz": "/usr/local/bin/unxz",
+    "unzstd": "/usr/local/bin/unzstd",
+    "uuclient": "/usr/local/bin/uuclient",
+    "wheel": "/usr/local/bin/wheel",
+    "wish": "/usr/local/bin/wish",
+    "wish8.6": "/usr/local/bin/wish8.6",
+    "wrjpgcom": "/usr/local/bin/wrjpgcom",
+    "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
+    "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
+    "xml2-config": "/usr/local/bin/xml2-config",
+    "xmlcatalog": "/usr/local/bin/xmlcatalog",
+    "xmllint": "/usr/local/bin/xmllint",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore",
+    "zstd": "/usr/local/bin/zstd",
+    "zstdcat": "/usr/local/bin/zstdcat",
+    "zstdgrep": "/usr/local/bin/zstdgrep",
+    "zstdless": "/usr/local/bin/zstdless",
+    "zstdmt": "/usr/local/bin/zstdmt"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/t/tipp:1.1.0--py38pl5321hdcf5f25_0.json b/quay.io/biocontainers/t/tipp:1.1.0--py38pl5321hdcf5f25_0.json
new file mode 100644
index 0000000..c5c8229
--- /dev/null
+++ b/quay.io/biocontainers/t/tipp:1.1.0--py38pl5321hdcf5f25_0.json
@@ -0,0 +1,324 @@
+{
+    "2to3": "/usr/local/bin/2to3",
+    "2to3-3.8": "/usr/local/bin/2to3-3.8",
+    "GraphAligner": "/usr/local/bin/GraphAligner",
+    "MSA.plot.r": "/usr/local/bin/MSA.plot.r",
+    "R": "/usr/local/bin/R",
+    "Rscript": "/usr/local/bin/Rscript",
+    "TIPP.pl": "/usr/local/bin/TIPP.pl",
+    "TIPP_plastid.pl": "/usr/local/bin/TIPP_plastid.pl",
+    "TIPP_plastid.v2.1.pl": "/usr/local/bin/TIPP_plastid.v2.1.pl",
+    "TIPP_polish.pl": "/usr/local/bin/TIPP_polish.pl",
+    "TIPP_telomere.pl": "/usr/local/bin/TIPP_telomere.pl",
+    "TIPP_telomere_backup.pl": "/usr/local/bin/TIPP_telomere_backup.pl",
+    "activate-global-python-argcomplete": "/usr/local/bin/activate-global-python-argcomplete",
+    "adig": "/usr/local/bin/adig",
+    "ahost": "/usr/local/bin/ahost",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "cairo-trace": "/usr/local/bin/cairo-trace",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "cjpeg": "/usr/local/bin/cjpeg",
+    "clear": "/usr/local/bin/clear",
+    "clm": "/usr/local/bin/clm",
+    "clxdo": "/usr/local/bin/clxdo",
+    "compile_et": "/usr/local/bin/compile_et",
+    "convert-caffe2-to-onnx": "/usr/local/bin/convert-caffe2-to-onnx",
+    "convert-onnx-to-caffe2": "/usr/local/bin/convert-onnx-to-caffe2",
+    "corelist": "/usr/local/bin/corelist",
+    "cpan": "/usr/local/bin/cpan",
+    "curl": "/usr/local/bin/curl",
+    "curl-config": "/usr/local/bin/curl-config",
+    "derb": "/usr/local/bin/derb",
+    "djpeg": "/usr/local/bin/djpeg",
+    "enc2xs": "/usr/local/bin/enc2xs",
+    "encguess": "/usr/local/bin/encguess",
+    "f2py": "/usr/local/bin/f2py",
+    "f2py3": "/usr/local/bin/f2py3",
+    "f2py3.8": "/usr/local/bin/f2py3.8",
+    "fc-cache": "/usr/local/bin/fc-cache",
+    "fc-cat": "/usr/local/bin/fc-cat",
+    "fc-conflist": "/usr/local/bin/fc-conflist",
+    "fc-list": "/usr/local/bin/fc-list",
+    "fc-match": "/usr/local/bin/fc-match",
+    "fc-pattern": "/usr/local/bin/fc-pattern",
+    "fc-query": "/usr/local/bin/fc-query",
+    "fc-scan": "/usr/local/bin/fc-scan",
+    "fc-validate": "/usr/local/bin/fc-validate",
+    "flye": "/usr/local/bin/flye",
+    "flye-minimap2": "/usr/local/bin/flye-minimap2",
+    "flye-modules": "/usr/local/bin/flye-modules",
+    "flye-samtools": "/usr/local/bin/flye-samtools",
+    "freetype-config": "/usr/local/bin/freetype-config",
+    "fribidi": "/usr/local/bin/fribidi",
+    "futurize": "/usr/local/bin/futurize",
+    "genbrk": "/usr/local/bin/genbrk",
+    "gencfu": "/usr/local/bin/gencfu",
+    "gencnval": "/usr/local/bin/gencnval",
+    "gendict": "/usr/local/bin/gendict",
+    "genrb": "/usr/local/bin/genrb",
+    "glpsol": "/usr/local/bin/glpsol",
+    "graph.plot.r": "/usr/local/bin/graph.plot.r",
+    "gss-client": "/usr/local/bin/gss-client",
+    "h2ph": "/usr/local/bin/h2ph",
+    "h2xs": "/usr/local/bin/h2xs",
+    "hb-info": "/usr/local/bin/hb-info",
+    "hb-ot-shape-closure": "/usr/local/bin/hb-ot-shape-closure",
+    "hb-shape": "/usr/local/bin/hb-shape",
+    "hb-subset": "/usr/local/bin/hb-subset",
+    "hb-view": "/usr/local/bin/hb-view",
+    "html2repeatbed.pl": "/usr/local/bin/html2repeatbed.pl",
+    "icu-config": "/usr/local/bin/icu-config",
+    "icuexportdata": "/usr/local/bin/icuexportdata",
+    "icuinfo": "/usr/local/bin/icuinfo",
+    "idle3": "/usr/local/bin/idle3",
+    "idle3.8": "/usr/local/bin/idle3.8",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "installBiocDataPackage.sh": "/usr/local/bin/installBiocDataPackage.sh",
+    "instmodsh": "/usr/local/bin/instmodsh",
+    "jpegtran": "/usr/local/bin/jpegtran",
+    "jq": "/usr/local/bin/jq",
+    "json_pp": "/usr/local/bin/json_pp",
+    "k5srvutil": "/usr/local/bin/k5srvutil",
+    "k8": "/usr/local/bin/k8",
+    "kadmin": "/usr/local/bin/kadmin",
+    "kdestroy": "/usr/local/bin/kdestroy",
+    "keyctl": "/usr/local/bin/keyctl",
+    "kinit": "/usr/local/bin/kinit",
+    "klist": "/usr/local/bin/klist",
+    "kpasswd": "/usr/local/bin/kpasswd",
+    "krb5-config": "/usr/local/bin/krb5-config",
+    "ksu": "/usr/local/bin/ksu",
+    "kswitch": "/usr/local/bin/kswitch",
+    "ktutil": "/usr/local/bin/ktutil",
+    "kvno": "/usr/local/bin/kvno",
+    "libdeflate-gunzip": "/usr/local/bin/libdeflate-gunzip",
+    "libdeflate-gzip": "/usr/local/bin/libdeflate-gzip",
+    "libnetcfg": "/usr/local/bin/libnetcfg",
+    "libpng-config": "/usr/local/bin/libpng-config",
+    "libpng16-config": "/usr/local/bin/libpng16-config",
+    "lzcat": "/usr/local/bin/lzcat",
+    "lzcmp": "/usr/local/bin/lzcmp",
+    "lzdiff": "/usr/local/bin/lzdiff",
+    "lzegrep": "/usr/local/bin/lzegrep",
+    "lzfgrep": "/usr/local/bin/lzfgrep",
+    "lzgrep": "/usr/local/bin/lzgrep",
+    "lzless": "/usr/local/bin/lzless",
+    "lzma": "/usr/local/bin/lzma",
+    "lzmadec": "/usr/local/bin/lzmadec",
+    "lzmainfo": "/usr/local/bin/lzmainfo",
+    "lzmore": "/usr/local/bin/lzmore",
+    "make": "/usr/local/bin/make",
+    "makeconv": "/usr/local/bin/makeconv",
+    "mcl": "/usr/local/bin/mcl",
+    "mclblastline": "/usr/local/bin/mclblastline",
+    "mcx": "/usr/local/bin/mcx",
+    "mcxarray": "/usr/local/bin/mcxarray",
+    "mcxdeblast": "/usr/local/bin/mcxdeblast",
+    "mcxdump": "/usr/local/bin/mcxdump",
+    "mcxi": "/usr/local/bin/mcxi",
+    "mcxload": "/usr/local/bin/mcxload",
+    "mcxmap": "/usr/local/bin/mcxmap",
+    "mcxsubs": "/usr/local/bin/mcxsubs",
+    "minimap2": "/usr/local/bin/minimap2",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "nghttp": "/usr/local/bin/nghttp",
+    "nghttpd": "/usr/local/bin/nghttpd",
+    "nghttpx": "/usr/local/bin/nghttpx",
+    "ninja": "/usr/local/bin/ninja",
+    "numba": "/usr/local/bin/numba",
+    "onig-config": "/usr/local/bin/onig-config",
+    "openssl": "/usr/local/bin/openssl",
+    "paftools.js": "/usr/local/bin/paftools.js",
+    "pango-list": "/usr/local/bin/pango-list",
+    "pango-segmentation": "/usr/local/bin/pango-segmentation",
+    "pango-view": "/usr/local/bin/pango-view",
+    "pasteurize": "/usr/local/bin/pasteurize",
+    "pcre2-config": "/usr/local/bin/pcre2-config",
+    "pcre2grep": "/usr/local/bin/pcre2grep",
+    "pcre2test": "/usr/local/bin/pcre2test",
+    "perl": "/usr/local/bin/perl",
+    "perl5.32.1": "/usr/local/bin/perl5.32.1",
+    "perlbug": "/usr/local/bin/perlbug",
+    "perldoc": "/usr/local/bin/perldoc",
+    "perlivp": "/usr/local/bin/perlivp",
+    "perlthanks": "/usr/local/bin/perlthanks",
+    "piconv": "/usr/local/bin/piconv",
+    "pip": "/usr/local/bin/pip",
+    "pip3": "/usr/local/bin/pip3",
+    "pkgdata": "/usr/local/bin/pkgdata",
+    "pl2pm": "/usr/local/bin/pl2pm",
+    "png-fix-itxt": "/usr/local/bin/png-fix-itxt",
+    "pngfix": "/usr/local/bin/pngfix",
+    "pod2html": "/usr/local/bin/pod2html",
+    "pod2man": "/usr/local/bin/pod2man",
+    "pod2text": "/usr/local/bin/pod2text",
+    "pod2usage": "/usr/local/bin/pod2usage",
+    "podchecker": "/usr/local/bin/podchecker",
+    "prove": "/usr/local/bin/prove",
+    "ptar": "/usr/local/bin/ptar",
+    "ptardiff": "/usr/local/bin/ptardiff",
+    "ptargrep": "/usr/local/bin/ptargrep",
+    "pycc": "/usr/local/bin/pycc",
+    "pydoc": "/usr/local/bin/pydoc",
+    "pydoc3": "/usr/local/bin/pydoc3",
+    "pydoc3.8": "/usr/local/bin/pydoc3.8",
+    "python": "/usr/local/bin/python",
+    "python-argcomplete-check-easy-install-script": "/usr/local/bin/python-argcomplete-check-easy-install-script",
+    "python3": "/usr/local/bin/python3",
+    "python3-config": "/usr/local/bin/python3-config",
+    "python3.8": "/usr/local/bin/python3.8",
+    "python3.8-config": "/usr/local/bin/python3.8-config",
+    "rcl": "/usr/local/bin/rcl",
+    "rcl-dot-resmap.pl": "/usr/local/bin/rcl-dot-resmap.pl",
+    "rcl-qc": "/usr/local/bin/rcl-qc",
+    "rcl-qm.R": "/usr/local/bin/rcl-qm.R",
+    "rcl-relevel.pl": "/usr/local/bin/rcl-relevel.pl",
+    "rcl-select.pl": "/usr/local/bin/rcl-select.pl",
+    "rcldo.pl": "/usr/local/bin/rcldo.pl",
+    "rdjpgcom": "/usr/local/bin/rdjpgcom",
+    "readskmercount": "/usr/local/bin/readskmercount",
+    "readskmercount.cpp": "/usr/local/bin/readskmercount.cpp",
+    "register-python-argcomplete": "/usr/local/bin/register-python-argcomplete",
+    "reset": "/usr/local/bin/reset",
+    "sclient": "/usr/local/bin/sclient",
+    "sdust": "/usr/local/bin/sdust",
+    "sed": "/usr/local/bin/sed",
+    "shasum": "/usr/local/bin/shasum",
+    "sim_client": "/usr/local/bin/sim_client",
+    "splain": "/usr/local/bin/splain",
+    "spoa": "/usr/local/bin/spoa",
+    "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
+    "streamzip": "/usr/local/bin/streamzip",
+    "tabs": "/usr/local/bin/tabs",
+    "tabulate": "/usr/local/bin/tabulate",
+    "tclsh": "/usr/local/bin/tclsh",
+    "tclsh8.6": "/usr/local/bin/tclsh8.6",
+    "telomeres.visulization.r": "/usr/local/bin/telomeres.visulization.r",
+    "tiara": "/usr/local/bin/tiara",
+    "tiara-test": "/usr/local/bin/tiara-test",
+    "tic": "/usr/local/bin/tic",
+    "tiffcp": "/usr/local/bin/tiffcp",
+    "tiffdump": "/usr/local/bin/tiffdump",
+    "tiffinfo": "/usr/local/bin/tiffinfo",
+    "tiffset": "/usr/local/bin/tiffset",
+    "tiffsplit": "/usr/local/bin/tiffsplit",
+    "tjbench": "/usr/local/bin/tjbench",
+    "toe": "/usr/local/bin/toe",
+    "tomlq": "/usr/local/bin/tomlq",
+    "tput": "/usr/local/bin/tput",
+    "tqdm": "/usr/local/bin/tqdm",
+    "trf": "/usr/local/bin/trf",
+    "trf4.10.0-rc.2.linux64.exe": "/usr/local/bin/trf4.10.0-rc.2.linux64.exe",
+    "tset": "/usr/local/bin/tset",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unxz": "/usr/local/bin/unxz",
+    "unzstd": "/usr/local/bin/unzstd",
+    "uuclient": "/usr/local/bin/uuclient",
+    "wheel": "/usr/local/bin/wheel",
+    "wish": "/usr/local/bin/wish",
+    "wish8.6": "/usr/local/bin/wish8.6",
+    "wrjpgcom": "/usr/local/bin/wrjpgcom",
+    "x86_64-conda-linux-gnu-addr2line": "/usr/local/bin/x86_64-conda-linux-gnu-addr2line",
+    "x86_64-conda-linux-gnu-ar": "/usr/local/bin/x86_64-conda-linux-gnu-ar",
+    "x86_64-conda-linux-gnu-as": "/usr/local/bin/x86_64-conda-linux-gnu-as",
+    "x86_64-conda-linux-gnu-c++": "/usr/local/bin/x86_64-conda-linux-gnu-c++",
+    "x86_64-conda-linux-gnu-c++filt": "/usr/local/bin/x86_64-conda-linux-gnu-c++filt",
+    "x86_64-conda-linux-gnu-c89": "/usr/local/bin/x86_64-conda-linux-gnu-c89",
+    "x86_64-conda-linux-gnu-c99": "/usr/local/bin/x86_64-conda-linux-gnu-c99",
+    "x86_64-conda-linux-gnu-cc": "/usr/local/bin/x86_64-conda-linux-gnu-cc",
+    "x86_64-conda-linux-gnu-cpp": "/usr/local/bin/x86_64-conda-linux-gnu-cpp",
+    "x86_64-conda-linux-gnu-dwp": "/usr/local/bin/x86_64-conda-linux-gnu-dwp",
+    "x86_64-conda-linux-gnu-elfedit": "/usr/local/bin/x86_64-conda-linux-gnu-elfedit",
+    "x86_64-conda-linux-gnu-f95": "/usr/local/bin/x86_64-conda-linux-gnu-f95",
+    "x86_64-conda-linux-gnu-g++": "/usr/local/bin/x86_64-conda-linux-gnu-g++",
+    "x86_64-conda-linux-gnu-gcc": "/usr/local/bin/x86_64-conda-linux-gnu-gcc",
+    "x86_64-conda-linux-gnu-gcc-ar": "/usr/local/bin/x86_64-conda-linux-gnu-gcc-ar",
+    "x86_64-conda-linux-gnu-gcc-nm": "/usr/local/bin/x86_64-conda-linux-gnu-gcc-nm",
+    "x86_64-conda-linux-gnu-gcc-ranlib": "/usr/local/bin/x86_64-conda-linux-gnu-gcc-ranlib",
+    "x86_64-conda-linux-gnu-gcov": "/usr/local/bin/x86_64-conda-linux-gnu-gcov",
+    "x86_64-conda-linux-gnu-gcov-dump": "/usr/local/bin/x86_64-conda-linux-gnu-gcov-dump",
+    "x86_64-conda-linux-gnu-gcov-tool": "/usr/local/bin/x86_64-conda-linux-gnu-gcov-tool",
+    "x86_64-conda-linux-gnu-gfortran": "/usr/local/bin/x86_64-conda-linux-gnu-gfortran",
+    "x86_64-conda-linux-gnu-gprof": "/usr/local/bin/x86_64-conda-linux-gnu-gprof",
+    "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
+    "x86_64-conda-linux-gnu-ld.bfd": "/usr/local/bin/x86_64-conda-linux-gnu-ld.bfd",
+    "x86_64-conda-linux-gnu-ld.gold": "/usr/local/bin/x86_64-conda-linux-gnu-ld.gold",
+    "x86_64-conda-linux-gnu-nm": "/usr/local/bin/x86_64-conda-linux-gnu-nm",
+    "x86_64-conda-linux-gnu-objcopy": "/usr/local/bin/x86_64-conda-linux-gnu-objcopy",
+    "x86_64-conda-linux-gnu-objdump": "/usr/local/bin/x86_64-conda-linux-gnu-objdump",
+    "x86_64-conda-linux-gnu-ranlib": "/usr/local/bin/x86_64-conda-linux-gnu-ranlib",
+    "x86_64-conda-linux-gnu-readelf": "/usr/local/bin/x86_64-conda-linux-gnu-readelf",
+    "x86_64-conda-linux-gnu-size": "/usr/local/bin/x86_64-conda-linux-gnu-size",
+    "x86_64-conda-linux-gnu-strings": "/usr/local/bin/x86_64-conda-linux-gnu-strings",
+    "x86_64-conda-linux-gnu-strip": "/usr/local/bin/x86_64-conda-linux-gnu-strip",
+    "x86_64-conda-linux-gnu.cfg": "/usr/local/bin/x86_64-conda-linux-gnu.cfg",
+    "x86_64-conda_cos6-linux-gnu-addr2line": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-addr2line",
+    "x86_64-conda_cos6-linux-gnu-ar": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ar",
+    "x86_64-conda_cos6-linux-gnu-as": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-as",
+    "x86_64-conda_cos6-linux-gnu-c++": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c++",
+    "x86_64-conda_cos6-linux-gnu-c++filt": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c++filt",
+    "x86_64-conda_cos6-linux-gnu-c89": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c89",
+    "x86_64-conda_cos6-linux-gnu-c99": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-c99",
+    "x86_64-conda_cos6-linux-gnu-cc": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-cc",
+    "x86_64-conda_cos6-linux-gnu-cpp": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-cpp",
+    "x86_64-conda_cos6-linux-gnu-dwp": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-dwp",
+    "x86_64-conda_cos6-linux-gnu-elfedit": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-elfedit",
+    "x86_64-conda_cos6-linux-gnu-f95": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-f95",
+    "x86_64-conda_cos6-linux-gnu-g++": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-g++",
+    "x86_64-conda_cos6-linux-gnu-gcc": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc",
+    "x86_64-conda_cos6-linux-gnu-gcc-ar": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc-ar",
+    "x86_64-conda_cos6-linux-gnu-gcc-nm": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc-nm",
+    "x86_64-conda_cos6-linux-gnu-gcc-ranlib": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc-ranlib",
+    "x86_64-conda_cos6-linux-gnu-gcov": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcov",
+    "x86_64-conda_cos6-linux-gnu-gcov-dump": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcov-dump",
+    "x86_64-conda_cos6-linux-gnu-gcov-tool": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcov-tool",
+    "x86_64-conda_cos6-linux-gnu-gfortran": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gfortran",
+    "x86_64-conda_cos6-linux-gnu-gprof": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gprof",
+    "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
+    "x86_64-conda_cos6-linux-gnu-ld.bfd": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld.bfd",
+    "x86_64-conda_cos6-linux-gnu-ld.gold": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld.gold",
+    "x86_64-conda_cos6-linux-gnu-nm": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-nm",
+    "x86_64-conda_cos6-linux-gnu-objcopy": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-objcopy",
+    "x86_64-conda_cos6-linux-gnu-objdump": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-objdump",
+    "x86_64-conda_cos6-linux-gnu-ranlib": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ranlib",
+    "x86_64-conda_cos6-linux-gnu-readelf": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-readelf",
+    "x86_64-conda_cos6-linux-gnu-size": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-size",
+    "x86_64-conda_cos6-linux-gnu-strings": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-strings",
+    "x86_64-conda_cos6-linux-gnu-strip": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-strip",
+    "xml2-config": "/usr/local/bin/xml2-config",
+    "xmlcatalog": "/usr/local/bin/xmlcatalog",
+    "xmllint": "/usr/local/bin/xmllint",
+    "xmlwf": "/usr/local/bin/xmlwf",
+    "xq": "/usr/local/bin/xq",
+    "xsubpp": "/usr/local/bin/xsubpp",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore",
+    "yq": "/usr/local/bin/yq",
+    "zipdetails": "/usr/local/bin/zipdetails",
+    "zstd": "/usr/local/bin/zstd",
+    "zstdcat": "/usr/local/bin/zstdcat",
+    "zstdgrep": "/usr/local/bin/zstdgrep",
+    "zstdless": "/usr/local/bin/zstdless",
+    "zstdmt": "/usr/local/bin/zstdmt"
+}
\ No newline at end of file
diff --git a/quay.io/biocontainers/v/vgorient:0.1.1--pyhdfd78af_0.json b/quay.io/biocontainers/v/vgorient:0.1.1--pyhdfd78af_0.json
new file mode 100644
index 0000000..1d337dc
--- /dev/null
+++ b/quay.io/biocontainers/v/vgorient:0.1.1--pyhdfd78af_0.json
@@ -0,0 +1,90 @@
+{
+    "2to3": "/usr/local/bin/2to3",
+    "2to3-3.11": "/usr/local/bin/2to3-3.11",
+    "Cutoff_Node.py": "/usr/local/bin/Cutoff_Node.py",
+    "OOP_gfa_parser.py": "/usr/local/bin/OOP_gfa_parser.py",
+    "Rotation_and_Orientation.py": "/usr/local/bin/Rotation_and_Orientation.py",
+    "VG_diterative.py": "/usr/local/bin/VG_diterative.py",
+    "VG_iterative.py": "/usr/local/bin/VG_iterative.py",
+    "bunzip2": "/usr/local/bin/bunzip2",
+    "bzcat": "/usr/local/bin/bzcat",
+    "bzcmp": "/usr/local/bin/bzcmp",
+    "bzdiff": "/usr/local/bin/bzdiff",
+    "bzegrep": "/usr/local/bin/bzegrep",
+    "bzfgrep": "/usr/local/bin/bzfgrep",
+    "bzgrep": "/usr/local/bin/bzgrep",
+    "bzip2": "/usr/local/bin/bzip2",
+    "bzip2recover": "/usr/local/bin/bzip2recover",
+    "bzless": "/usr/local/bin/bzless",
+    "bzmore": "/usr/local/bin/bzmore",
+    "c_rehash": "/usr/local/bin/c_rehash",
+    "captoinfo": "/usr/local/bin/captoinfo",
+    "clear": "/usr/local/bin/clear",
+    "cut_and_rot.py": "/usr/local/bin/cut_and_rot.py",
+    "cut_and_rot_orient.py": "/usr/local/bin/cut_and_rot_orient.py",
+    "cut_and_rot_rebuild.py": "/usr/local/bin/cut_and_rot_rebuild.py",
+    "f2py": "/usr/local/bin/f2py",
+    "idle3": "/usr/local/bin/idle3",
+    "idle3.11": "/usr/local/bin/idle3.11",
+    "infocmp": "/usr/local/bin/infocmp",
+    "infotocap": "/usr/local/bin/infotocap",
+    "jaccard_dit_wrapper.py": "/usr/local/bin/jaccard_dit_wrapper.py",
+    "kmer_jaccard.py": "/usr/local/bin/kmer_jaccard.py",
+    "kmer_rotation_multiprocessing.py": "/usr/local/bin/kmer_rotation_multiprocessing.py",
+    "lzcat": "/usr/local/bin/lzcat",
+    "lzcmp": "/usr/local/bin/lzcmp",
+    "lzdiff": "/usr/local/bin/lzdiff",
+    "lzegrep": "/usr/local/bin/lzegrep",
+    "lzfgrep": "/usr/local/bin/lzfgrep",
+    "lzgrep": "/usr/local/bin/lzgrep",
+    "lzless": "/usr/local/bin/lzless",
+    "lzma": "/usr/local/bin/lzma",
+    "lzmadec": "/usr/local/bin/lzmadec",
+    "lzmainfo": "/usr/local/bin/lzmainfo",
+    "lzmore": "/usr/local/bin/lzmore",
+    "ncurses6-config": "/usr/local/bin/ncurses6-config",
+    "ncursesw6-config": "/usr/local/bin/ncursesw6-config",
+    "noisify.py": "/usr/local/bin/noisify.py",
+    "numpy-config": "/usr/local/bin/numpy-config",
+    "offset_fasta.py": "/usr/local/bin/offset_fasta.py",
+    "openssl": "/usr/local/bin/openssl",
+    "pip": "/usr/local/bin/pip",
+    "pip3": "/usr/local/bin/pip3",
+    "pydoc": "/usr/local/bin/pydoc",
+    "pydoc3": "/usr/local/bin/pydoc3",
+    "pydoc3.11": "/usr/local/bin/pydoc3.11",
+    "python": "/usr/local/bin/python",
+    "python3": "/usr/local/bin/python3",
+    "python3-config": "/usr/local/bin/python3-config",
+    "python3.1": "/usr/local/bin/python3.1",
+    "python3.11": "/usr/local/bin/python3.11",
+    "python3.11-config": "/usr/local/bin/python3.11-config",
+    "request_fastas.py": "/usr/local/bin/request_fastas.py",
+    "reset": "/usr/local/bin/reset",
+    "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
+    "tabs": "/usr/local/bin/tabs",
+    "tclsh": "/usr/local/bin/tclsh",
+    "tclsh8.6": "/usr/local/bin/tclsh8.6",
+    "tic": "/usr/local/bin/tic",
+    "toe": "/usr/local/bin/toe",
+    "tput": "/usr/local/bin/tput",
+    "tset": "/usr/local/bin/tset",
+    "unlzma": "/usr/local/bin/unlzma",
+    "unxz": "/usr/local/bin/unxz",
+    "vg": "/usr/local/bin/vg",
+    "wheel": "/usr/local/bin/wheel",
+    "wish": "/usr/local/bin/wish",
+    "wish8.6": "/usr/local/bin/wish8.6",
+    "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
+    "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
+    "xz": "/usr/local/bin/xz",
+    "xzcat": "/usr/local/bin/xzcat",
+    "xzcmp": "/usr/local/bin/xzcmp",
+    "xzdec": "/usr/local/bin/xzdec",
+    "xzdiff": "/usr/local/bin/xzdiff",
+    "xzegrep": "/usr/local/bin/xzegrep",
+    "xzfgrep": "/usr/local/bin/xzfgrep",
+    "xzgrep": "/usr/local/bin/xzgrep",
+    "xzless": "/usr/local/bin/xzless",
+    "xzmore": "/usr/local/bin/xzmore"
+}
\ No newline at end of file