From 7e831a4945f8efe4821d6e9349ee46f28c3e8a63 Mon Sep 17 00:00:00 2001 From: John Kerl Date: Fri, 22 Nov 2024 15:17:02 -0500 Subject: [PATCH] [r] Prepare for 1.15.0rc4 --- apis/r/DESCRIPTION | 2 +- apis/r/NEWS.md | 14 +++++++++++++- 2 files changed, 14 insertions(+), 2 deletions(-) diff --git a/apis/r/DESCRIPTION b/apis/r/DESCRIPTION index 33e2e96110..fae6ef4a72 100644 --- a/apis/r/DESCRIPTION +++ b/apis/r/DESCRIPTION @@ -6,7 +6,7 @@ Description: Interface for working with 'TileDB'-based Stack of Matrices, like those commonly used for single cell data analysis. It is documented at ; a formal specification available is at . -Version: 1.14.99.8 +Version: 1.14.99.9 Authors@R: c( person(given = "Aaron", family = "Wolen", role = c("cre", "aut"), email = "aaron@tiledb.com", diff --git a/apis/r/NEWS.md b/apis/r/NEWS.md index 2ac03464bb..1fb4bbe06d 100644 --- a/apis/r/NEWS.md +++ b/apis/r/NEWS.md @@ -23,7 +23,19 @@ * Plumb old-style `SOMATileDBContext` into new-style `soma_context()` [#3252](https://github.com/single-cell-data/TileDB-SOMA/pull/3252) * Fixes for dense arrays and yet-to-be-released core 2.27 [#3270](https://github.com/single-cell-data/TileDB-SOMA/pull/3270) * More fixes for unit-test cases with dense + core 2.27 [#3280](https://github.com/single-cell-data/TileDB-SOMA/pull/3280) -* Add support for writing Seurat v5 ragged arrays +* Add initial support for ragged array writing for Seurat v5 by @mojaveazure in [#2523](https://github.com/single-cell-data/TileDB-SOMA/pull/2523) +* Remove 2.27-related feature flag by @johnkerl in [#3368](https://github.com/single-cell-data/TileDB-SOMA/pull/3368) +* Revert #3300 by @johnkerl in [#3358](https://github.com/single-cell-data/TileDB-SOMA/pull/3358) +* Enforce dataframe domain lower bound == 0 by @johnkerl in [#3300](https://github.com/single-cell-data/TileDB-SOMA/pull/3300) +* Data refresh for new shapes by @johnkerl in [#3303](https://github.com/single-cell-data/TileDB-SOMA/pull/3303) +* Move beyond the new-shape feature flag by @johnkerl in [#3301](https://github.com/single-cell-data/TileDB-SOMA/pull/3301) +* Note on dev installs and `spdlog` failures by @johnkerl in [#3324](https://github.com/single-cell-data/TileDB-SOMA/pull/3324) +* Remove tiledb-r specific install by @mojaveazure in [#3319](https://github.com/single-cell-data/TileDB-SOMA/pull/3319) +* Try to unbreak `r-valgrind` CI by @johnkerl in [#3318](https://github.com/single-cell-data/TileDB-SOMA/pull/3318) +* Avoid log truncation with "Last 13 lines of output" by @johnkerl in [#3313](https://github.com/single-cell-data/TileDB-SOMA/pull/3313) +* Run tests in closer to internal-dependency order by @johnkerl in [#3311](https://github.com/single-cell-data/TileDB-SOMA/pull/3311) +* Use standard name `zzz.R` for init code by @johnkerl in [#3332](https://github.com/single-cell-data/TileDB-SOMA/pull/3332) +* Address two more compiler warnings by @johnkerl in [#3320](https://github.com/single-cell-data/TileDB-SOMA/pull/3320) # tiledbsoma 1.14.5