v3.7.0

What's Changed

🎉 New features

• Updated net connection settings to use secure wss with Octopus server
• Bump react to version 18
• Added ability to check server health during auto-conversion of non-Simularium files using Octopus.
• Added function to disable panning in orbit controls.

⛏ Maintenance

• update from dependabot
• Exporting more types that are in use by front end implementations of viewer.
• Viewer now installable by applications that don't use Babel
• Test-bed viewer now in separate src folder, and simulation examples are re-organized

Pull requests included in this release

• Feature/server health check by @ascibisz in #349
• Update net connection settings to use wss for octopus by @ascibisz in #345
• Binding simulation by @meganrm in #355
• Bump follow-redirects from 1.15.2 to 1.15.4 by @dependabot in #356
• export modelinfo from index.ts by @interim17 in #357
• cd to examples folder to run build script by @interim17 in #360
• add viewer method to disable pan functionality by @interim17 in #361

Full Changelog: v3.6.4...v3.7.0

v3.6.4

What's Changed

🐞 Bug Fixes

• Shading is now working in orthographic camera mode
• The test bed viewer got a number of fixes, including the drag and drop and loading trajectories the way the website does
• Updated type exports

⛏ Maintenance

• Updated babel
• Updated README to make doing this easier
• Moved code for color handling into it's own file
• Updates to the nightly build

Pull requests included in this release

• added the template for release by @meganrm in #338
• Fix/orthographic camera ssao by @toloudis in #340
• Bump @babel/traverse from 7.21.5 to 7.23.2 by @dependabot in #337
• fix drag n drop in test viewer by @toloudis in #341
• Fix/viewer errors by @meganrm in #343
• Fix/color change bug by @meganrm in #346
• Update nightly-build.yml by @meganrm in #348
• Feature/trajectory data v3 by @meganrm in #350
• update babel to latest release by @meganrm in #354
• Fix/add timedata to exports by @meganrm in #353
• Feature/color module by @meganrm in #352

Full Changelog: v3.6.3...v3.6.4

v3.6.3

✨ New Features

• Support for fiber agents to use translation and rotation settings (same as other agent types)
• Ability to change the color of an agent type

🐛 Bug Fixes and Improvements

• Fixed a CORS issue with dropbox links

Pull requests included in this release

• Feature/set agent color edits by @meganrm in #328
• Bump postcss from 8.4.23 to 8.4.31 by @dependabot in #331
• Feature/set agent color by @interim17 in #325
• fix type exports by @interim17 in #334
• change dropbox links by @meganrm in #335
• add translation and rotation to fiber agents by @toloudis in #333

Full Changelog: v3.6.2...v3.6.3

v3.6.2

✨ New Features

• Orthographic camera 🎥

🐛 Bug Fixes and Improvements

• Ambient occlusion behaves better on zoom
• Fix a few initiation bugs

Pull requests included in this release

• Feature/orthographic camera by @frasercl in #314
• Fix VisGeometry constructor overwriting properties it initializes by @frasercl in #319
• Fix/ao with zoom by @toloudis in #315
• Catch error that occurs in race condition by @ascibisz in #321
• bind setCameraType and this in controller by @interim17 in #324
• Bump word-wrap from 1.2.3 to 1.2.4 by @dependabot in #323
• Bump tough-cookie from 4.1.2 to 4.1.3 by @dependabot in #322
• delay webgl init until after component mounted by @toloudis in #327

New Contributors

• @frasercl made their first contribution in #314
• @interim17 made their first contribution in #324

Full Changelog: v3.6.1...v3.6.2

v3.6.1

What's Changed

• Bug fix: Default to secureConnection = true if it not defined by @ascibisz in #316
• make all json message handlers into arrow functions by @meganrm in #318

Full Changelog: v3.6.0...v3.6.1

v3.6.0

✨ New Features

• Basic call for metrics calculation
• Smoldyn data communication

🐛 Bug Fixes and Improvements

• Changed how the canvas size is set for better integration in outside apps
• Update ThreeJS

Pull requests included in this release

• Feature/send smoldyn data to websocket by @ascibisz in #292
• Add basic call for metrics calculation by @ascibisz in #296
• Fix/init canvas size by @meganrm in #307
• Fix/threejs types by @toloudis in #312
• Update websocket messaging for octopus by @ascibisz in #302
• Fix/interface simularium file by @meganrm in #313

Full Changelog: v3.5.1...v3.6.0

v3.5.1

What's Changed

• Refactor web worker into proper source code file by @toloudis in #297
• Bump json5 and css-loader by @dependabot in #298

Full Changelog: v3.5.0...v3.5.1

v3.5.0

What's Changed

• Add first key to path in smoldyn form by @ascibisz in #286
• Fix/workflows by @meganrm in #289
• increase number of pdb atoms for levels of detail by @toloudis in #285
• Bump loader-utils from 1.4.0 to 1.4.2 by @dependabot in #291
• Fix/worker loading by @toloudis in #290
• Feature/dev build by @meganrm in #293
• Bump decode-uri-component from 0.2.0 to 0.2.2 by @dependabot in #295

New Contributors

• @ascibisz made their first contribution in #286

Full Changelog: v3.4.0...v3.5.0

v3.4.0

✨ New Features

• Sphere groups
• Proto live mode

🐛 Bug Fixes and Improvements

• Fixed fiber focus
• Improvements to our PDB and CIF loader: now downloads the biological unit and shows non protein structures
• Fixed the Hide All button in the demo viewer for better debugging
• Prototyping non simularium file loading

Pull requests included in this release

• Fix the fiber focus
• Feature/metaballs by @toloudis in #261
• Bump terser from 5.12.0 to 5.14.2 by @dependabot in #278
• download biological unit from pdb by @meganrm in #277
• Feature/proto live mode by @toloudis in #279
• Feature/improve cif loader by @toloudis in #281
• fix the "Hide All" in the demo viewer by @toloudis in #284
• Feature/UI template by @meganrm in #274

Full Changelog: v3.3.3...v3.4.0

v3.3.2

✨ New Features

• Can display Cubes! 📦
• Camera capture
• Can now load binary trajectory files

🐛 Bug Fixes and Improvements

• Fix the fiber focus

Pull requests included in this release

• fix the sample app build: css file was not being pre built by @toloudis in #236
• correct args passed to eslint by @toloudis in #242
• Bump node-fetch from 2.6.6 to 2.6.7 by @dependabot in #243
• Feature/update three by @toloudis in #244
• Bump follow-redirects from 1.14.7 to 1.14.8 by @dependabot in #246
• fix focus when fiber was clicked by checking for correct type by @toloudis in #250
• Feature/load binary trajectories by @toloudis in #247
• Feature/cam capture by @toloudis in #249
• Feature/refactor viewer from data by @toloudis in #257
• Bump node-forge from 1.2.1 to 1.3.0 by @dependabot in #258
• Bump minimist from 1.2.5 to 1.2.6 by @dependabot in #259
• Feature/cubes by @meganrm in #260
• Feature/export i simularium file by @toloudis in #262

Full Changelog: v3.3.1...v3.3.2