Cytosim can perform simulations in 1D, 2D or 3D, but the dimensionality is selected at compilation time!
This means that one executable will only be able to perform simulations for one dimensionality.
The dimension of the simulation is selected in src/math/dim.h
#define DIM 2
Save the file and always recompile everything after changing DIM:
make clean
make
This will place the executables in bin/
You can check the dimensionality of the executable, with:
bin/sim info
bin/play info
Shortcuts are built into the makefile, and you can do:
make bin2/sim
make bin2/play
and similarly
make bin3/sim
make bin3/play
and also:
make bin2
make bin3
or
make alldim
Compile the executables that you need and rename them accordingly:
cp bin2/play ~/cytobin/play2
cp bin3/play ~/cytobin/play3
Create shortcuts or alias if you use these often.