AVX2 #64
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # SPDX-FileCopyrightText: 2006-2024 Knut Reinert & Freie Universität Berlin | |
| # SPDX-FileCopyrightText: 2016-2024 Knut Reinert & MPI für molekulare Genetik | |
| # SPDX-License-Identifier: CC0-1.0 | |
| name: AVX2 | |
| on: | |
| # Will always run on the default branch | |
| schedule: | |
| - cron: "0 6 * * SUN" | |
| # Enables a manual trigger, may run on any branch | |
| workflow_dispatch: | |
| concurrency: | |
| group: avx2-${{ github.event.pull_request.number || github.ref }} | |
| cancel-in-progress: true | |
| env: | |
| SEQAN3_NO_VERSION_CHECK: 1 | |
| TZ: Europe/Berlin | |
| ISSUE: 2905 # Issue number to use for reporting failures | |
| defaults: | |
| run: | |
| shell: bash -Eexuo pipefail {0} | |
| jobs: | |
| build: | |
| name: ${{ matrix.build }} gcc${{ matrix.compiler }} | |
| runs-on: ubuntu-22.04 | |
| timeout-minutes: 300 | |
| if: github.repository_owner == 'seqan' || github.event_name == 'workflow_dispatch' | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| compiler: [11, 12, 13] | |
| build: [unit, snippet, performance, header] | |
| steps: | |
| - name: Checkout SeqAn3 | |
| uses: actions/checkout@v4 | |
| with: | |
| path: seqan3 | |
| submodules: true | |
| - name: Checkout SeqAn2 | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: seqan/seqan | |
| path: seqan3/submodules/seqan | |
| - name: Setup compiler | |
| uses: seqan/actions/setup-compiler@main | |
| with: | |
| compiler: gcc-${{ matrix.compiler }} | |
| - name: Install CMake | |
| uses: seqan/actions/setup-cmake@main | |
| with: | |
| cmake: 3.16.9 | |
| - name: Configure tests | |
| run: | | |
| mkdir seqan3-build | |
| cd seqan3-build | |
| cmake ../seqan3/test/${{ matrix.build }} -DCMAKE_BUILD_TYPE=Release \ | |
| -DSEQAN3_BENCHMARK_MIN_TIME=0.01 \ | |
| -DCMAKE_CXX_FLAGS="-mavx2" | |
| case "${{ matrix.build }}" in | |
| unit) make -j2 gtest_build;; | |
| snippet) make -j2 gtest_build;; | |
| performance) make -j2 gbenchmark_build;; | |
| header) make -j2 gtest_build gbenchmark_build;; | |
| esac | |
| - name: Build tests | |
| run: | | |
| cd seqan3-build | |
| make -k -j2 2>&1 | tee build.log | |
| - name: Setup Python | |
| if: ${{ failure() }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.x' | |
| - name: Process Log | |
| if: ${{ failure() }} | |
| run: | | |
| FILE="seqan3/.github/ISSUE_TEMPLATE/cron_comment_template.md" | |
| python3 seqan3/.github/workflows/scripts/process_compiler_error_log.py seqan3-build/build.log >> $FILE | |
| - name: Create comment body | |
| if: ${{ failure() }} | |
| id: comment-body | |
| run: | | |
| FILE="seqan3/.github/ISSUE_TEMPLATE/cron_comment_template.md" | |
| URL="$GITHUB_SERVER_URL/$GITHUB_REPOSITORY/actions/runs/$GITHUB_RUN_ID" | |
| sed -i "s@{{ build }}@${{ matrix.build }}@" $FILE | |
| sed -i "s@{{ compiler }}@${{ matrix.compiler }}@" $FILE | |
| sed -i "s@{{ url }}@$URL@" $FILE | |
| echo "body<<EOF" >> $GITHUB_OUTPUT | |
| cat $FILE >> $GITHUB_OUTPUT | |
| echo "EOF" >> $GITHUB_OUTPUT | |
| - name: Reopen issue | |
| if: ${{ failure() }} | |
| uses: octokit/[email protected] | |
| with: | |
| route: PATCH /repos/{owner}/{repo}/issues/{issue_number} | |
| owner: ${{ github.repository_owner }} | |
| repo: seqan3 | |
| issue_number: ${{ env.ISSUE }} | |
| state: "open" | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| - name: Create comment | |
| if: ${{ failure() }} | |
| uses: peter-evans/create-or-update-comment@v4 | |
| with: | |
| issue-number: ${{ env.ISSUE }} | |
| body: ${{ steps.comment-body.outputs.body }} | |