diff --git a/src/display_layout/general.cpp b/src/display_layout/general.cpp index ba8862d7..3304cd3e 100644 --- a/src/display_layout/general.cpp +++ b/src/display_layout/general.cpp @@ -116,7 +116,8 @@ int execute(config const & cfg) }); seqan::hibf::sketch::hyperloglog sketch{hibf_config.sketch_bits}; // store one sketch computeted by iterative add - std::vector sketches; // store separate sketches for each user bin to merge afterwards + std::vector + sketches; // store separate sketches for each user bin to merge afterwards robin_hood::unordered_set shared_kmers{}; // We can't use `shared_kmers.size() == 0` instead of `shared_kmers_initialised`, because keep_duplicates @@ -170,9 +171,7 @@ int execute(config const & cfg) << shared_kmers.size() << '\t' // << ub_count << '\t' // << (is_merged ? "merged" : "split") << '\t' // - << split_count << '\t' - << merge_estimate << '\t' - << merge_SIMD_estimate << '\n'; + << split_count << '\t' << merge_estimate << '\t' << merge_SIMD_estimate << '\n'; split_count = 0u; // Subsequent split bins display 0, the first split bin displays the actual split count. } }; diff --git a/src/display_layout/shared.hpp b/src/display_layout/shared.hpp index b3d93546..1c53838c 100644 --- a/src/display_layout/shared.hpp +++ b/src/display_layout/shared.hpp @@ -24,7 +24,6 @@ struct config void execute_general(config const & cfg); void execute_sizes(config const & cfg); - void process_file(std::string const & filename, std::vector & current_kmers, seqan::hibf::sketch::hyperloglog & sketch,