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Add codespell integration and fix found typos: added configuration and github workflow #1109

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merged 12 commits into from
Aug 29, 2023

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yarikoptic
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workflow would just fail (no automagic fixing) if a new typo introduced

  • Release note added (orunnecessary?)

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "git-sedi 'nd array' ndarray",
 "exit": 0,
 "extra_inputs": [],
 "inputs": [],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "git-sedi ' ot to ' ' to '",
 "exit": 0,
 "extra_inputs": [],
 "inputs": [],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "codespell -w -i 3 -C 2 ./anndata/experimental/_dispatch_io.py",
 "exit": 0,
 "extra_inputs": [],
 "inputs": [],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "codespell -w",
 "exit": 0,
 "extra_inputs": [],
 "inputs": [],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
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codecov bot commented Aug 28, 2023

Codecov Report

Merging #1109 (157eb69) into main (cb5b443) will decrease coverage by 2.09%.
The diff coverage is n/a.

Additional details and impacted files
@@            Coverage Diff             @@
##             main    #1109      +/-   ##
==========================================
- Coverage   84.79%   82.71%   -2.09%     
==========================================
  Files          36       36              
  Lines        5131     5131              
==========================================
- Hits         4351     4244     -107     
- Misses        780      887     +107     
Flag Coverage Δ
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Files Changed Coverage Δ
anndata/_core/aligned_mapping.py 93.66% <ø> (ø)
anndata/_core/anndata.py 82.79% <ø> (ø)
anndata/_core/merge.py 82.68% <ø> (-11.42%) ⬇️
anndata/_io/read.py 81.05% <ø> (ø)
anndata/_io/specs/methods.py 87.46% <ø> (-0.25%) ⬇️
anndata/_io/specs/registry.py 95.91% <ø> (ø)
anndata/compat/__init__.py 80.44% <ø> (-0.56%) ⬇️
anndata/experimental/_dispatch_io.py 100.00% <ø> (ø)
anndata/experimental/merge.py 87.56% <ø> (ø)
anndata/experimental/multi_files/_anncollection.py 70.56% <ø> (ø)
... and 1 more

... and 2 files with indirect coverage changes

@flying-sheep flying-sheep added this to the 0.10.0 milestone Aug 29, 2023
@flying-sheep flying-sheep enabled auto-merge (squash) August 29, 2023 07:34
@flying-sheep
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Thank you!

@flying-sheep flying-sheep merged commit 87d363e into scverse:main Aug 29, 2023
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2 participants