Examples
For the SBGN-to-yEd conversion, the ReconMap resource, available in CellDesigner xml format via the MINERVA interface at the Virtual Metabolic Human, was transformed to SBGN-ML format by the cd2sbgnml converter, a complementary tool that converts between CellDesigner-specific SBML extension and SBGN-ML.
The output yEd GraphML ReconMap2_01 file, generated using the ySBGN converter, can be downloaded from the example_files/RECON folder.
The input SBGN file is available from the SBGN resources: https://github.com/sbgn/libsbgn/tree/master/example-files.
The output yEd GraphML glyscolysis file, generated using the ySBGN converter, can be downloaded from the example files/pathways folder.
| Newt |  |
| yEd |  |
The input SBGN file is available on the SBGN resources: https://github.com/sbgn/libsbgn/tree/master/example-files.
The output yEd GraphML central plant metabolism file, generated using the ySBGN converter, can be downloaded from the example files/pathways folder.
| SBGN resource |  |
| yEd |  |
