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Conflicting Units of Information #135

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cannin opened this issue Apr 14, 2011 · 3 comments
Open

Conflicting Units of Information #135

cannin opened this issue Apr 14, 2011 · 3 comments

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@cannin
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cannin commented Apr 14, 2011

The spec does not expressly forbid conflicting Units of Information containing controlled vocabularies of the same type. For example it is possible to define a macromolecule with both a protein (mt:prot) and RNA (mt:rna) Unit of Information associated with it. This clearly should be forbidden. Likewise it seems to be possible to specify a Macromolecule with differing cardinality Units of Information.

Reported by: stumoodie

@cannin
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cannin commented Apr 16, 2011

I ... tend to agree ... but we have problems with the conceptual types. In particular, when we extend the vocabulary, we can have EGFR which is a receptor and an enzyme. One possibility would be to quality the vocabularies as exclusive or inclusive. Example of exclusive would be mt, pc and cardinality.

Original comment by: lenov

@cannin
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cannin commented Apr 16, 2011

  • status: open --> pending

Original comment by: lenov

@hasanbalci
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Maybe we could have a section like Guidelines or General Rules about the validity of finalized maps and this issue can be considered as part of that section.

@hasanbalci hasanbalci modified the milestones: L1V2.1, L2+ Aug 29, 2024
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