From aa800f8ac735f8c6d97d0d92fbb15184c65d176c Mon Sep 17 00:00:00 2001 From: reichan1998 Date: Mon, 22 Jul 2024 20:17:28 +0700 Subject: [PATCH] add a FASTQ sample into samplesheet_s3.csv for test profile --- assets/samplesheet_s3.csv | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/assets/samplesheet_s3.csv b/assets/samplesheet_s3.csv index 5089aed..b409060 100644 --- a/assets/samplesheet_s3.csv +++ b/assets/samplesheet_s3.csv @@ -1,6 +1,6 @@ sample,datatype,datafile,library mMelMel1,illumina,https://tolit.cog.sanger.ac.uk/test-data/Meles_meles/genomic_data/mMelMel1/illumina/31231_3%231.subset.cram, -mMelMel2,illumina,https://tolit.cog.sanger.ac.uk/test-data/Meles_meles/genomic_data/mMelMel2/illumina/31231_4%231.subset.cram, +mMelMel2,illumina,https://tolit.cog.sanger.ac.uk/test-data/Meles_meles/genomic_data/mMelMel2/illumina/31231_4%231.subset.fastq.gz, mMelMel3,hic,https://tolit.cog.sanger.ac.uk/test-data/Meles_meles/genomic_data/mMelMel3/hic/35528_2%231.subset.cram, mMelMel3,ont,https://tolit.cog.sanger.ac.uk/test-data/Meles_meles/genomic_data/mMelMel3/ont/PAE35587_pass_1f1f0707_115.subset.fastq.gz, mMelMel3,pacbio,https://tolit.cog.sanger.ac.uk/test-data/Meles_meles/genomic_data/mMelMel3/pacbio/m64094_200910_173211.ccs.bc1022_BAK8B_OA--bc1022_BAK8B_OA.subset.bam,