From 7303eb8ba82ae285ced52cb775d92b11c8605a95 Mon Sep 17 00:00:00 2001 From: Matthieu Muffato Date: Fri, 31 May 2024 10:55:10 +0000 Subject: [PATCH] bugfix: --busco is optional --- bin/generate_config.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/bin/generate_config.py b/bin/generate_config.py index d070bccd..6b1fb211 100755 --- a/bin/generate_config.py +++ b/bin/generate_config.py @@ -35,7 +35,7 @@ def parse_args(args=None): parser.add_argument("--yml_out", required=True, help="Output YML file.") parser.add_argument("--csv_out", required=True, help="Output CSV file.") parser.add_argument("--accession", help="Accession number of the assembly (optional).", default=None) - parser.add_argument("--busco", required=True, help="Requested BUSCO lineages.", default=None) + parser.add_argument("--busco", help="Requested BUSCO lineages.", default=None) parser.add_argument("--blastn", required=True, help="Path to the NCBI Taxonomy database") parser.add_argument("--version", action="version", version="%(prog)s 1.4") return parser.parse_args(args)