From 7aac083b853484bf63f770a9d115af6d4080a367 Mon Sep 17 00:00:00 2001 From: DLBPointon Date: Thu, 21 Nov 2024 15:05:34 +0000 Subject: [PATCH] Fixing CI data --- .github/workflows/ci.yml | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index 7031908..4afbe21 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -70,12 +70,12 @@ jobs: - name: Download test data # Download A fungal test data set that is full enough to show some real output. run: | - pwd + ls curl https://tolit.cog.sanger.ac.uk/test-data/resources/ascc/asccTinyTest_V2.tar.gz | tar xzf - - cp asccTinyTest_V2/assembly/Pyoeliiyoelii17XNL_assembly.fa asccTinyTest_V2/assembly/Pyoeliiyoelii17XNL_assembly_hap.fa + cp /home/runner/work/ascc/ascc/asccTinyTest_V2/assembly/Pyoeliiyoelii17XNL_assembly.fa /home/runner/work/ascc/ascc/asccTinyTest_V2/assembly/Pyoeliiyoelii17XNL_assembly_hap.fa - cp ./sanger-ascc/${{ steps.branch-names.outputs.current_branch }}/assets/github_testing/data/Pyoeliiyoelii17XNL_mitochondrion_ncbi.fa ./asccTinyTest_V2/assembly/mito.fa + cp /home/runner/work/ascc/ascc/sanger-ascc/${{ steps.branch-names.outputs.current_branch }}/assets/github_testing/data/Pyoeliiyoelii17XNL_mitochondrion_ncbi.fa /home/runner/work/ascc/ascc/asccTinyTest_V2/assembly/mito.fa - name: Temporary ASCC Diamond Data run: |