From 51b5811cab76da27c6f2214a9c49dc7929a7c34d Mon Sep 17 00:00:00 2001 From: yumisims Date: Mon, 9 Oct 2023 21:05:55 +0100 Subject: [PATCH] add taxdump dir to github test --- assets/github_testing/test.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/assets/github_testing/test.yaml b/assets/github_testing/test.yaml index ea4c85a..7b97bd4 100755 --- a/assets/github_testing/test.yaml +++ b/assets/github_testing/test.yaml @@ -11,7 +11,7 @@ kmer_len: 7 nt_database: /data/blastdb/Supported/NT/current/ nt_kraken_db_path: /lustre/scratch123/tol/teams/tola/users/ea10/ascc_databases/nt/nt ncbi_taxonomy_path: /lustre/scratch123/tol/teams/tola/users/ea10/databases/taxdump/ -ncbi_rankedlineage_path: /lustre/scratch123/tol/teams/tola/users/ea10/databases/taxdump/rankedlineage.dmp +ncbi_rankedlineage_path: /home/runner/work/ascc/ascc/ncbi_taxdump/rankedlineage.dmp busco_lineages_folder: /lustre/scratch123/tol/resources/busco/data/v5/2021-03-14/lineages fcs_gx_database_path: /home/runner/work/ascc/ascc/FCS_gx/ seqkit: