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modules.json
124 lines (124 loc) · 5.54 KB
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modules.json
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{
"name": "sanger-tol/ascc",
"homePage": "https://github.com/sanger-tol/ascc",
"repos": {
"https://github.com/nf-core/modules.git": {
"modules": {
"nf-core": {
"blast/blastn": {
"branch": "master",
"git_sha": "4262a04142431275e54e1f4b413628a2201ed6e6",
"installed_by": ["modules"]
},
"blast/makeblastdb": {
"branch": "master",
"git_sha": "8fc1d24c710ebe1d5de0f2447ec9439fd3d9d66a",
"installed_by": ["modules"]
},
"custom/dumpsoftwareversions": {
"branch": "master",
"git_sha": "8fc1d24c710ebe1d5de0f2447ec9439fd3d9d66a",
"installed_by": ["modules"]
},
"custom/getchromsizes": {
"branch": "master",
"git_sha": "8fc1d24c710ebe1d5de0f2447ec9439fd3d9d66a",
"installed_by": ["modules"],
"patch": "modules/nf-core/custom/getchromsizes/custom-getchromsizes.diff"
},
"diamond/blastx": {
"branch": "master",
"git_sha": "8fc1d24c710ebe1d5de0f2447ec9439fd3d9d66a",
"installed_by": ["modules"]
},
"fastqc": {
"branch": "master",
"git_sha": "8fc1d24c710ebe1d5de0f2447ec9439fd3d9d66a",
"installed_by": ["modules"]
},
"fcs/fcsadaptor": {
"branch": "master",
"git_sha": "516189e968feb4ebdd9921806988b4c12b4ac2dc",
"installed_by": ["modules"]
},
"fcs/fcsgx": {
"branch": "master",
"git_sha": "516189e968feb4ebdd9921806988b4c12b4ac2dc",
"installed_by": ["modules"]
},
"gnu/sort": {
"branch": "master",
"git_sha": "8fc1d24c710ebe1d5de0f2447ec9439fd3d9d66a",
"installed_by": ["modules"]
},
"kraken2/kraken2": {
"branch": "master",
"git_sha": "8fc1d24c710ebe1d5de0f2447ec9439fd3d9d66a",
"installed_by": ["modules"],
"patch": "modules/nf-core/kraken2/kraken2/kraken2-kraken2.diff"
},
"minimap2/align": {
"branch": "master",
"git_sha": "8fc1d24c710ebe1d5de0f2447ec9439fd3d9d66a",
"installed_by": ["modules"]
},
"minimap2/index": {
"branch": "master",
"git_sha": "8fc1d24c710ebe1d5de0f2447ec9439fd3d9d66a",
"installed_by": ["modules"]
},
"multiqc": {
"branch": "master",
"git_sha": "8fc1d24c710ebe1d5de0f2447ec9439fd3d9d66a",
"installed_by": ["modules"]
},
"ncbitools/vecscreen": {
"branch": "master",
"git_sha": "1e4ac4aa2c612f9547f79f02ef7c651ccc9f657b",
"installed_by": ["modules"]
},
"samtools/depth": {
"branch": "master",
"git_sha": "8fc1d24c710ebe1d5de0f2447ec9439fd3d9d66a",
"installed_by": ["modules"]
},
"samtools/faidx": {
"branch": "master",
"git_sha": "8fc1d24c710ebe1d5de0f2447ec9439fd3d9d66a",
"installed_by": ["modules"]
},
"samtools/index": {
"branch": "master",
"git_sha": "8fc1d24c710ebe1d5de0f2447ec9439fd3d9d66a",
"installed_by": ["modules"]
},
"samtools/merge": {
"branch": "master",
"git_sha": "516189e968feb4ebdd9921806988b4c12b4ac2dc",
"installed_by": ["modules"]
},
"samtools/sort": {
"branch": "master",
"git_sha": "8fc1d24c710ebe1d5de0f2447ec9439fd3d9d66a",
"installed_by": ["modules"]
},
"samtools/view": {
"branch": "master",
"git_sha": "3ffae3598260a99e8db3207dead9f73f87f90d1f",
"installed_by": ["modules"]
},
"seqkit/sliding": {
"branch": "master",
"git_sha": "8fc1d24c710ebe1d5de0f2447ec9439fd3d9d66a",
"installed_by": ["modules"]
},
"tiara/tiara": {
"branch": "master",
"git_sha": "8fc1d24c710ebe1d5de0f2447ec9439fd3d9d66a",
"installed_by": ["modules"]
}
}
}
}
}
}