tests.yaml

name: "Running tests: style, mypy, pytest"

on: [push, pull_request]

jobs:
  tests:
    runs-on: ubuntu-latest
    name: Style, mypy, pytest
    steps:
    - uses: actions/checkout@v3
    - name: Set up Python 3.9
      uses: actions/setup-python@v3
      with:
        python-version: 3.9
    - name: Install Dependencies
      run: pip install -e ".[dev, rdkit]"
    - name: Install additional dependencies (for pydantic>2)
      run: pip install pydantic_settings
    - name: Check black
      run: python -m black --check --diff --color .
    - name: Check isort
      run: python -m isort --check --diff .
    - name: Check flake8
      run: python -m flake8 .
    - name: Check mypy (on the package)
      run: python -m mypy --namespace-packages -p rxn.availability
    - name: Check mypy (on the tests)
      run: python -m mypy tests
    - name: Run pytests
      run: python -m pytest -sv --cov=rxn.availability --cov-fail-under=60