From 431420ecc7b7903b3bcd4b2092bb43da4572ca35 Mon Sep 17 00:00:00 2001 From: Batool Almarzouq <53487593+BatoolMM@users.noreply.github.com> Date: Tue, 5 Nov 2024 12:34:06 +0000 Subject: [PATCH] Update draft.md --- draft.md | 234 +++++++------------------------------------------------ 1 file changed, 27 insertions(+), 207 deletions(-) diff --git a/draft.md b/draft.md index 8f7a0dee..6ee0a722 100644 --- a/draft.md +++ b/draft.md @@ -99,222 +99,59 @@ Demo Presentation 🔍 [Search on R-universe](https://r-universe.dev/search/) 🔍 -+ [{NeuralEstimators} 0.1.1](https://cran.r-project.org/package=NeuralEstimators): Likelihood-Free Parameter Estimation using Neural Networks - [diffify](https://diffify.com/R/NeuralEstimators) -+ [{DSI} 1.7.1](https://cran.r-project.org/package=DSI): 'DataSHIELD' Interface - [diffify](https://diffify.com/R/DSI) -+ [{kyotil} 2024.11-01](https://cran.r-project.org/package=kyotil): Utility Functions for Statistical Analysis Report Generation and -Monte Carlo Studies - [diffify](https://diffify.com/R/kyotil) -+ [{enmSdmX} 1.1.9](https://cran.r-project.org/package=enmSdmX): Species Distribution Modeling and Ecological Niche Modeling - [diffify](https://diffify.com/R/enmSdmX) -+ [{ogrdbstats} 0.5.2](https://cran.r-project.org/package=ogrdbstats): Analysis of Adaptive Immune Receptor Repertoire Germ Line -Statistics - [diffify](https://diffify.com/R/ogrdbstats) + [{spatstat.utils} 3.1-1](https://cran.r-project.org/package=spatstat.utils): Utility Functions for 'spatstat' - [diffify](https://diffify.com/R/spatstat.utils) -+ [{robmed} 1.1.0](https://cran.r-project.org/package=robmed): (Robust) Mediation Analysis - [diffify](https://diffify.com/R/robmed) -+ [{RLoptimal} 1.1.0](https://cran.r-project.org/package=RLoptimal): Optimal Adaptive Allocation Using Deep Reinforcement Learning - [diffify](https://diffify.com/R/RLoptimal) -+ [{reformulas} 0.4.0](https://cran.r-project.org/package=reformulas): Machinery for Processing Random Effect Formulas - [diffify](https://diffify.com/R/reformulas) -+ [{MazamaSpatialUtils} 0.8.7](https://cran.r-project.org/package=MazamaSpatialUtils): Spatial Data Download and Utility Functions - [diffify](https://diffify.com/R/MazamaSpatialUtils) + + [{ggeasy} 0.1.5](https://cran.r-project.org/package=ggeasy): Easy Access to 'ggplot2' Commands - [diffify](https://diffify.com/R/ggeasy) -+ [{daltoolbox} 1.0.787](https://cran.r-project.org/package=daltoolbox): Leveraging Experiment Lines to Data Analytics - [diffify](https://diffify.com/R/daltoolbox) -+ [{crew} 0.10.1](https://cran.r-project.org/package=crew): A Distributed Worker Launcher Framework - [diffify](https://diffify.com/R/crew) -+ [{collapse} 2.0.17](https://cran.r-project.org/package=collapse): Advanced and Fast Data Transformation - [diffify](https://diffify.com/R/collapse) -+ [{PvSTATEM} 0.1.1](https://cran.r-project.org/package=PvSTATEM): Reading, Quality Control and Preprocessing of MBA (Multiplex -Bead Assay) Data - [diffify](https://diffify.com/R/PvSTATEM) -+ [{Rcpp} 1.0.13-1](https://cran.r-project.org/package=Rcpp): Seamless R and C++ Integration - [diffify](https://diffify.com/R/Rcpp) + + [{EIEntropy} 0.0.1.2](https://cran.r-project.org/package=EIEntropy): Ecological Inference Applying Entropy - [diffify](https://diffify.com/R/EIEntropy) -+ [{multinet} 4.2.1](https://cran.r-project.org/package=multinet): Analysis and mining of multilayer social networks - [diffify](https://diffify.com/R/multinet) -+ [{LadderFuelsR} 0.0.7](https://cran.r-project.org/package=LadderFuelsR): Automated Tool for Vertical Fuel Continuity Analysis using -Airborne Laser Scanning Data - [diffify](https://diffify.com/R/LadderFuelsR) -+ [{semhelpinghands} 0.1.12](https://cran.r-project.org/package=semhelpinghands): Helper Functions for Structural Equation Modeling - [diffify](https://diffify.com/R/semhelpinghands) + + [{dataCompare} 1.0.1](https://cran.r-project.org/package=dataCompare): A 'shiny' App to Compare Two Data Frames - [diffify](https://diffify.com/R/dataCompare) -+ [{NMsim} 0.1.4](https://cran.r-project.org/package=NMsim): Seamless 'Nonmem' Simulation Platform - [diffify](https://diffify.com/R/NMsim) -+ [{wxgenR} 1.4.2](https://cran.r-project.org/package=wxgenR): A Stochastic Weather Generator with Seasonality - [diffify](https://diffify.com/R/wxgenR) -+ [{PakPC2023} 0.2.0](https://cran.r-project.org/package=PakPC2023): Pakistan Population Census 2023 - [diffify](https://diffify.com/R/PakPC2023) -+ [{RaceID} 0.3.7](https://cran.r-project.org/package=RaceID): Identification of Cell Types, Inference of Lineage Trees, and -Prediction of Noise Dynamics from Single-Cell RNA-Seq Data - [diffify](https://diffify.com/R/RaceID) -+ [{iccmult} 1.0.1](https://cran.r-project.org/package=iccmult): Intracluster Correlation Coefficient (ICC) in Clustered -Categorical Data - [diffify](https://diffify.com/R/iccmult) -+ [{landscapeR} 1.3](https://cran.r-project.org/package=landscapeR): Categorical Landscape Simulation Facility - [diffify](https://diffify.com/R/landscapeR) + ++ [{RaceID} 0.3.7](https://cran.r-project.org/package=RaceID): Identification of Cell Types, Inference of Lineage Trees, and Prediction of Noise Dynamics from Single-Cell RNA-Seq Data - [diffify](https://diffify.com/R/RaceID) + + [{iimi} 1.2.1](https://cran.r-project.org/package=iimi): Identifying Infection with Machine Intelligence - [diffify](https://diffify.com/R/iimi) -+ [{rSRD} 0.1.8](https://cran.r-project.org/package=rSRD): Sum of Ranking Differences Statistical Test - [diffify](https://diffify.com/R/rSRD) -+ [{gdm} 1.6.0-3](https://cran.r-project.org/package=gdm): Generalized Dissimilarity Modeling - [diffify](https://diffify.com/R/gdm) -+ [{ReliaGrowR} 0.1.1](https://cran.r-project.org/package=ReliaGrowR): Reliability Growth Analysis - [diffify](https://diffify.com/R/ReliaGrowR) -+ [{R.oo} 1.27.0](https://cran.r-project.org/package=R.oo): R Object-Oriented Programming with or without References - [diffify](https://diffify.com/R/R.oo) -+ [{CDGHMM} 0.1.1](https://cran.r-project.org/package=CDGHMM): Hidden Markov Models for Multivariate Panel Data - [diffify](https://diffify.com/R/CDGHMM) -+ [{PxWebApiData} 1.0.0](https://cran.r-project.org/package=PxWebApiData): PX-Web Data by API - [diffify](https://diffify.com/R/PxWebApiData) -+ [{tinytex} 0.54](https://cran.r-project.org/package=tinytex): Helper Functions to Install and Maintain TeX Live, and Compile -LaTeX Documents - [diffify](https://diffify.com/R/tinytex) -+ [{AlphaSimR} 1.6.1](https://cran.r-project.org/package=AlphaSimR): Breeding Program Simulations - [diffify](https://diffify.com/R/AlphaSimR) + + [{basemaps} 0.0.8](https://cran.r-project.org/package=basemaps): Accessing Spatial Basemaps in R - [diffify](https://diffify.com/R/basemaps) + + [{mapgl} 0.1.4](https://cran.r-project.org/package=mapgl): Interactive Maps with 'Mapbox GL JS' and 'MapLibre GL JS' - [diffify](https://diffify.com/R/mapgl) + + [{priorsense} 1.0.4](https://cran.r-project.org/package=priorsense): Prior Diagnostics and Sensitivity Analysis - [diffify](https://diffify.com/R/priorsense) + + [{gitignore} 0.1.8](https://cran.r-project.org/package=gitignore): Create Useful .gitignore Files for your Project - [diffify](https://diffify.com/R/gitignore) -+ [{CICI} 0.9.3](https://cran.r-project.org/package=CICI): Causal Inference with Continuous (Multiple Time Point) -Interventions - [diffify](https://diffify.com/R/CICI) -+ [{crosstable} 0.8.1](https://cran.r-project.org/package=crosstable): Crosstables for Descriptive Analyses - [diffify](https://diffify.com/R/crosstable) -+ [{blockCV} 3.1-5](https://cran.r-project.org/package=blockCV): Spatial and Environmental Blocking for K-Fold and LOO -Cross-Validation - [diffify](https://diffify.com/R/blockCV) -+ [{NetworkReg} 2.0](https://cran.r-project.org/package=NetworkReg): Generalized Linear Regression Models on Network-Linked Data with -Statistical Inference - [diffify](https://diffify.com/R/NetworkReg) + + [{ggstatsplot} 0.12.5](https://cran.r-project.org/package=ggstatsplot): 'ggplot2' Based Plots with Statistical Details - [diffify](https://diffify.com/R/ggstatsplot) -+ [{slca} 1.2.0](https://cran.r-project.org/package=slca): Structural Modeling for Multiple Latent Class Variables - [diffify](https://diffify.com/R/slca) -+ [{cpfa} 1.1-6](https://cran.r-project.org/package=cpfa): Classification with Parallel Factor Analysis - [diffify](https://diffify.com/R/cpfa) -+ [{ASMap} 1.0-8](https://cran.r-project.org/package=ASMap): Linkage Map Construction using the MSTmap Algorithm - [diffify](https://diffify.com/R/ASMap) -+ [{GLMMcosinor} 0.2.1](https://cran.r-project.org/package=GLMMcosinor): Fit a Cosinor Model Using a Generalized Mixed Modeling Framework - [diffify](https://diffify.com/R/GLMMcosinor) -+ [{ieegio} 0.0.2](https://cran.r-project.org/package=ieegio): File IO for Intracranial Electroencephalography - [diffify](https://diffify.com/R/ieegio) -+ [{autometric} 0.1.1](https://cran.r-project.org/package=autometric): Background Resource Logging - [diffify](https://diffify.com/R/autometric) -+ [{scicomptools} 1.1.0](https://cran.r-project.org/package=scicomptools): Tools Developed by the NCEAS Scientific Computing Support Team - [diffify](https://diffify.com/R/scicomptools) -+ [{Quartet} 1.2.7](https://cran.r-project.org/package=Quartet): Comparison of Phylogenetic Trees Using Quartet and Split -Measures - [diffify](https://diffify.com/R/Quartet) -+ [{IncidencePrevalence} 0.8.1](https://cran.r-project.org/package=IncidencePrevalence): Estimate Incidence and Prevalence using the OMOP Common Data -Model - [diffify](https://diffify.com/R/IncidencePrevalence) -+ [{BSTZINB} 1.0.1](https://cran.r-project.org/package=BSTZINB): Association Among Disease Counts and Socio-Environmental Factors - [diffify](https://diffify.com/R/BSTZINB) -+ [{scoringutils} 2.0.0](https://cran.r-project.org/package=scoringutils): Utilities for Scoring and Assessing Predictions - [diffify](https://diffify.com/R/scoringutils) -+ [{predictoR} 4.1.1](https://cran.r-project.org/package=predictoR): Predictive Data Analysis System - [diffify](https://diffify.com/R/predictoR) -+ [{ympes} 1.6.0](https://cran.r-project.org/package=ympes): Collection of Helper Functions - [diffify](https://diffify.com/R/ympes) -+ [{xfun} 0.49](https://cran.r-project.org/package=xfun): Supporting Functions for Packages Maintained by 'Yihui Xie' - [diffify](https://diffify.com/R/xfun) -+ [{optbin} 1.4](https://cran.r-project.org/package=optbin): Optimal Binning of Data - [diffify](https://diffify.com/R/optbin) -+ [{mlflow} 2.17.2](https://cran.r-project.org/package=mlflow): Interface to 'MLflow' - [diffify](https://diffify.com/R/mlflow) + + [{flexlsx} 0.3.0](https://cran.r-project.org/package=flexlsx): Exporting 'flextable' to 'xlsx' Files - [diffify](https://diffify.com/R/flexlsx) -+ [{EDCimport} 0.5.1](https://cran.r-project.org/package=EDCimport): Import Data from EDC Software - [diffify](https://diffify.com/R/EDCimport) -+ [{wintime} 0.3.0](https://cran.r-project.org/package=wintime): Win Time Methods for Time-to-Event Data in Clinical Trials - [diffify](https://diffify.com/R/wintime) -+ [{tsDyn} 11.0.5.2](https://cran.r-project.org/package=tsDyn): Nonlinear Time Series Models with Regime Switching - [diffify](https://diffify.com/R/tsDyn) -+ [{inlamemi} 1.1.0](https://cran.r-project.org/package=inlamemi): Missing Data and Measurement Error Modelling in INLA - [diffify](https://diffify.com/R/inlamemi) + + [{iForecast} 1.0.9](https://cran.r-project.org/package=iForecast): Machine Learning Time Series Forecasting - [diffify](https://diffify.com/R/iForecast) -+ [{icr} 0.6.6](https://cran.r-project.org/package=icr): Compute Krippendorff's Alpha - [diffify](https://diffify.com/R/icr) -+ [{FinNet} 0.2.1](https://cran.r-project.org/package=FinNet): Quickly Build and Manipulate Financial Networks - [diffify](https://diffify.com/R/FinNet) -+ [{BayesMultiMode} 0.7.3](https://cran.r-project.org/package=BayesMultiMode): Bayesian Mode Inference - [diffify](https://diffify.com/R/BayesMultiMode) -+ [{EpiNow2} 1.6.1](https://cran.r-project.org/package=EpiNow2): Estimate Real-Time Case Counts and Time-Varying Epidemiological -Parameters - [diffify](https://diffify.com/R/EpiNow2) + + [{dunlin} 0.1.8](https://cran.r-project.org/package=dunlin): Preprocessing Tools for Clinical Trial Data - [diffify](https://diffify.com/R/dunlin) -+ [{DisaggregateTS} 3.0.1](https://cran.r-project.org/package=DisaggregateTS): High-Dimensional Temporal Disaggregation - [diffify](https://diffify.com/R/DisaggregateTS) -+ [{meta} 8.0-1](https://cran.r-project.org/package=meta): General Package for Meta-Analysis - [diffify](https://diffify.com/R/meta) -+ [{vdiffr} 1.0.8](https://cran.r-project.org/package=vdiffr): Visual Regression Testing and Graphical Diffing - [diffify](https://diffify.com/R/vdiffr) -+ [{TropFishR} 1.6.5](https://cran.r-project.org/package=TropFishR): Tropical Fisheries Analysis - [diffify](https://diffify.com/R/TropFishR) -+ [{SpatialDDLS} 1.0.3](https://cran.r-project.org/package=SpatialDDLS): Deconvolution of Spatial Transcriptomics Data Based on Neural -Networks - [diffify](https://diffify.com/R/SpatialDDLS) -+ [{NMdata} 0.1.8](https://cran.r-project.org/package=NMdata): Preparation, Checking and Post-Processing Data for PK/PD -Modeling - [diffify](https://diffify.com/R/NMdata) -+ [{miniPCH} 0.4.0](https://cran.r-project.org/package=miniPCH): Survival Distributions with Piece-Wise Constant Hazards - [diffify](https://diffify.com/R/miniPCH) -+ [{greenfeedr} 1.0.1](https://cran.r-project.org/package=greenfeedr): Process and Report 'GreenFeed' Data - [diffify](https://diffify.com/R/greenfeedr) -+ [{lingtypology} 1.1.20](https://cran.r-project.org/package=lingtypology): Linguistic Typology and Mapping - [diffify](https://diffify.com/R/lingtypology) -+ [{LDATree} 0.2.0](https://cran.r-project.org/package=LDATree): Oblique Classification Trees with Uncorrelated Linear -Discriminant Analysis Splits - [diffify](https://diffify.com/R/LDATree) -+ [{dataRetrieval} 2.7.17](https://cran.r-project.org/package=dataRetrieval): Retrieval Functions for USGS and EPA Hydrology and Water Quality -Data - [diffify](https://diffify.com/R/dataRetrieval) -+ [{ggsector} 1.7.0](https://cran.r-project.org/package=ggsector): Draw Sectors - [diffify](https://diffify.com/R/ggsector) -+ [{file2meco} 0.9.0](https://cran.r-project.org/package=file2meco): Transform Files to 'microtable' Object with 'microeco' Package - [diffify](https://diffify.com/R/file2meco) -+ [{survML} 1.2.0](https://cran.r-project.org/package=survML): Tools for Flexible Survival Analysis Using Machine Learning - [diffify](https://diffify.com/R/survML) + + [{statsExpressions} 1.6.1](https://cran.r-project.org/package=statsExpressions): Tidy Dataframes and Expressions with Statistical Details - [diffify](https://diffify.com/R/statsExpressions) -+ [{smacpod} 2.6.4](https://cran.r-project.org/package=smacpod): Statistical Methods for the Analysis of Case-Control Point Data - [diffify](https://diffify.com/R/smacpod) -+ [{MSCquartets} 3.0](https://cran.r-project.org/package=MSCquartets): Analyzing Gene Tree Quartets under the Multi-Species Coalescent - [diffify](https://diffify.com/R/MSCquartets) -+ [{ColOpenData} 0.3.1](https://cran.r-project.org/package=ColOpenData): Download Colombian Demographic, Climate and Geospatial Data - [diffify](https://diffify.com/R/ColOpenData) -+ [{samc} 4.0.0](https://cran.r-project.org/package=samc): Spatial Absorbing Markov Chains - [diffify](https://diffify.com/R/samc) -+ [{Rpolyhedra} 0.5.5](https://cran.r-project.org/package=Rpolyhedra): Polyhedra Database - [diffify](https://diffify.com/R/Rpolyhedra) -+ [{micromap} 1.9.10](https://cran.r-project.org/package=micromap): Linked Micromap Plots - [diffify](https://diffify.com/R/micromap) -+ [{rangeBuilder} 2.2](https://cran.r-project.org/package=rangeBuilder): Occurrence Filtering, Geographic Standardization and Generation -of Species Range Polygons - [diffify](https://diffify.com/R/rangeBuilder) -+ [{COMMA} 1.1.0](https://cran.r-project.org/package=COMMA): Correcting Misclassified Mediation Analysis - [diffify](https://diffify.com/R/COMMA) -+ [{smof} 1.2.1](https://cran.r-project.org/package=smof): Scoring Methodology for Ordered Factors - [diffify](https://diffify.com/R/smof) + + [{proffer} 0.2.1](https://cran.r-project.org/package=proffer): Profile R Code and Visualize with 'Pprof' - [diffify](https://diffify.com/R/proffer) -+ [{MSTest} 0.1.3](https://cran.r-project.org/package=MSTest): Hypothesis Testing for Markov Switching Models - [diffify](https://diffify.com/R/MSTest) -+ [{cureplots} 1.1.1](https://cran.r-project.org/package=cureplots): CURE (Cumulative Residual) Plots - [diffify](https://diffify.com/R/cureplots) -+ [{mappeR} 1.3.0](https://cran.r-project.org/package=mappeR): Construct and Visualize TDA Mapper Graphs - [diffify](https://diffify.com/R/mappeR) -+ [{pbdSLAP} 0.3-6](https://cran.r-project.org/package=pbdSLAP): Programming with Big Data -- Scalable Linear Algebra Packages - [diffify](https://diffify.com/R/pbdSLAP) -+ [{bWGR} 2.2.11](https://cran.r-project.org/package=bWGR): Bayesian Whole-Genome Regression - [diffify](https://diffify.com/R/bWGR) -+ [{COMBO} 1.2.0](https://cran.r-project.org/package=COMBO): Correcting Misclassified Binary Outcomes in Association Studies - [diffify](https://diffify.com/R/COMBO) + + [{DescToolsAddIns} 1.12](https://cran.r-project.org/package=DescToolsAddIns): Interactive Functions to be Used as Shortcuts in 'RStudio' - [diffify](https://diffify.com/R/DescToolsAddIns) -+ [{GD} 10.6](https://cran.r-project.org/package=GD): Geographical Detectors for Assessing Spatial Factors - [diffify](https://diffify.com/R/GD) -+ [{compareGroups} 4.9.1](https://cran.r-project.org/package=compareGroups): Descriptive Analysis by Groups - [diffify](https://diffify.com/R/compareGroups) -+ [{survminer} 0.5.0](https://cran.r-project.org/package=survminer): Drawing Survival Curves using 'ggplot2' - [diffify](https://diffify.com/R/survminer) -+ [{FKF.SP} 0.3.3](https://cran.r-project.org/package=FKF.SP): Fast Kalman Filtering Through Sequential Processing - [diffify](https://diffify.com/R/FKF.SP) -+ [{PEPBVS} 2.0](https://cran.r-project.org/package=PEPBVS): Bayesian Variable Selection using Power-Expected-Posterior Prior - [diffify](https://diffify.com/R/PEPBVS) -+ [{MM4LMM} 3.0.3](https://cran.r-project.org/package=MM4LMM): Inference of Linear Mixed Models Through MM Algorithm - [diffify](https://diffify.com/R/MM4LMM) -+ [{rtoot} 0.3.5](https://cran.r-project.org/package=rtoot): Collecting and Analyzing Mastodon Data - [diffify](https://diffify.com/R/rtoot) -+ [{ggtangle} 0.0.4](https://cran.r-project.org/package=ggtangle): Draw Network with Data - [diffify](https://diffify.com/R/ggtangle) -+ [{duckdb} 1.1.2](https://cran.r-project.org/package=duckdb): DBI Package for the DuckDB Database Management System - [diffify](https://diffify.com/R/duckdb) -+ [{softclassval} 1.1.0](https://cran.r-project.org/package=softclassval): Soft Classification Performance Measures - [diffify](https://diffify.com/R/softclassval) -+ [{fuzzySim} 4.26](https://cran.r-project.org/package=fuzzySim): Fuzzy Similarity in Species Distributions - [diffify](https://diffify.com/R/fuzzySim) -+ [{FuzzyImputationTest} 0.3.4](https://cran.r-project.org/package=FuzzyImputationTest): Imputation Procedures and Quality Tests for Fuzzy Data - [diffify](https://diffify.com/R/FuzzyImputationTest) -+ [{fs} 1.6.5](https://cran.r-project.org/package=fs): Cross-Platform File System Operations Based on 'libuv' - [diffify](https://diffify.com/R/fs) -+ [{rxode2} 3.0.2](https://cran.r-project.org/package=rxode2): Facilities for Simulating from ODE-Based Models - [diffify](https://diffify.com/R/rxode2) -+ [{rice} 0.4.0](https://cran.r-project.org/package=rice): Radiocarbon Equations - [diffify](https://diffify.com/R/rice) -+ [{refseqR} 1.1.5](https://cran.r-project.org/package=refseqR): Common Computational Operations Working with RefSeq Entries -(GenBank) - [diffify](https://diffify.com/R/refseqR) -+ [{modEvA} 3.20](https://cran.r-project.org/package=modEvA): Model Evaluation and Analysis - [diffify](https://diffify.com/R/modEvA) -+ [{elhmc} 1.2.1](https://cran.r-project.org/package=elhmc): Sampling from a Empirical Likelihood Bayesian Posterior of -Parameters Using Hamiltonian Monte Carlo - [diffify](https://diffify.com/R/elhmc) -+ [{rliger} 2.1.0](https://cran.r-project.org/package=rliger): Linked Inference of Genomic Experimental Relationships - [diffify](https://diffify.com/R/rliger) -+ [{gcbd} 0.2.7](https://cran.r-project.org/package=gcbd): 'GPU'/CPU Benchmarking in Debian-Based Systems - [diffify](https://diffify.com/R/gcbd) -+ [{dexisensitivity} 1.0.1](https://cran.r-project.org/package=dexisensitivity): 'DEXi' Decision Tree Analysis and Visualization - [diffify](https://diffify.com/R/dexisensitivity) -+ [{bravo} 3.2.2](https://cran.r-project.org/package=bravo): Bayesian Screening and Variable Selection - [diffify](https://diffify.com/R/bravo) + + [{bio3d} 2.4-5](https://cran.r-project.org/package=bio3d): Biological Structure Analysis - [diffify](https://diffify.com/R/bio3d) -+ [{folda} 0.2.0](https://cran.r-project.org/package=folda): Forward Stepwise Discriminant Analysis with Pillai's Trace - [diffify](https://diffify.com/R/folda) + + [{manynet} 1.3.1](https://cran.r-project.org/package=manynet): Many Ways to Make, Modify, Map, Mark, and Measure Myriad Networks - [diffify](https://diffify.com/R/manynet) -+ [{ordinalForest} 2.4-4](https://cran.r-project.org/package=ordinalForest): Ordinal Forests: Prediction and Variable Ranking with Ordinal -Target Variables - [diffify](https://diffify.com/R/ordinalForest) -+ [{nlmixr2extra} 3.0.1](https://cran.r-project.org/package=nlmixr2extra): Nonlinear Mixed Effects Models in Population PK/PD, Extra -Support Functions - [diffify](https://diffify.com/R/nlmixr2extra) -+ [{rqPen} 4.1.2](https://cran.r-project.org/package=rqPen): Penalized Quantile Regression - [diffify](https://diffify.com/R/rqPen) + + [{ggseqplot} 0.8.5](https://cran.r-project.org/package=ggseqplot): Render Sequence Plots using 'ggplot2' - [diffify](https://diffify.com/R/ggseqplot) -+ [{MCARtest} 1.2.2](https://cran.r-project.org/package=MCARtest): Optimal Nonparametric Testing of Missing Completely at Random - [diffify](https://diffify.com/R/MCARtest) -+ [{rstpm2} 1.6.6](https://cran.r-project.org/package=rstpm2): Smooth Survival Models, Including Generalized Survival Models - [diffify](https://diffify.com/R/rstpm2) -+ [{reactable.extras} 0.2.1](https://cran.r-project.org/package=reactable.extras): Extra Features for 'reactable' Package - [diffify](https://diffify.com/R/reactable.extras) + + [{RcmdrPlugin.DoE} 0.12-6](https://cran.r-project.org/package=RcmdrPlugin.DoE): R Commander Plugin for (Industrial) Design of Experiments - [diffify](https://diffify.com/R/RcmdrPlugin.DoE) -+ [{microeco} 1.10.0](https://cran.r-project.org/package=microeco): Microbial Community Ecology Data Analysis - [diffify](https://diffify.com/R/microeco) -+ [{biostat3} 0.2.2](https://cran.r-project.org/package=biostat3): Utility Functions, Datasets and Extended Examples for Survival -Analysis - [diffify](https://diffify.com/R/biostat3) -+ [{xplorerr} 0.2.0](https://cran.r-project.org/package=xplorerr): Tools for Interactive Data Exploration - [diffify](https://diffify.com/R/xplorerr) + + [{rspm} 0.6.1](https://cran.r-project.org/package=rspm): 'RStudio' Package Manager - [diffify](https://diffify.com/R/rspm) -+ [{QuadratiK} 1.1.2](https://cran.r-project.org/package=QuadratiK): Collection of Methods Constructed using Kernel-Based Quadratic -Distances - [diffify](https://diffify.com/R/QuadratiK) -+ [{TDApplied} 3.0.4](https://cran.r-project.org/package=TDApplied): Machine Learning and Inference for Topological Data Analysis - [diffify](https://diffify.com/R/TDApplied) -+ [{sfaR} 1.0.1](https://cran.r-project.org/package=sfaR): Stochastic Frontier Analysis Routines - [diffify](https://diffify.com/R/sfaR) -+ [{rminer} 1.4.8](https://cran.r-project.org/package=rminer): Data Mining Classification and Regression Methods - [diffify](https://diffify.com/R/rminer) -+ [{gtfsrouter} 0.1.3](https://cran.r-project.org/package=gtfsrouter): Routing with 'GTFS' (General Transit Feed Specification) Data - [diffify](https://diffify.com/R/gtfsrouter) -+ [{ECG} 0.5.2](https://cran.r-project.org/package=ECG): Center of Gravity Methods - [diffify](https://diffify.com/R/ECG) -+ [{Directional} 6.9](https://cran.r-project.org/package=Directional): A Collection of Functions for Directional Data Analysis - [diffify](https://diffify.com/R/Directional) -+ [{statgenMPP} 1.0.3](https://cran.r-project.org/package=statgenMPP): QTL Mapping for Multi Parent Populations - [diffify](https://diffify.com/R/statgenMPP) -+ [{TLIC} 0.3](https://cran.r-project.org/package=TLIC): The LIC for T Distribution Regression Analysis - [diffify](https://diffify.com/R/TLIC) + + [{progressr} 0.15.0](https://cran.r-project.org/package=progressr): An Inclusive, Unifying API for Progress Updates - [diffify](https://diffify.com/R/progressr) -+ [{dapper} 1.0.1](https://cran.r-project.org/package=dapper): Data Augmentation for Private Posterior Estimation - [diffify](https://diffify.com/R/dapper) -+ [{SVDNF} 0.1.11](https://cran.r-project.org/package=SVDNF): Discrete Nonlinear Filtering for Stochastic Volatility Models - [diffify](https://diffify.com/R/SVDNF) -+ [{nixtlar} 0.6.2](https://cran.r-project.org/package=nixtlar): A Software Development Kit for 'Nixtla''s 'TimeGPT' - [diffify](https://diffify.com/R/nixtlar) -+ [{ps} 1.8.1](https://cran.r-project.org/package=ps): List, Query, Manipulate System Processes - [diffify](https://diffify.com/R/ps) -+ [{nlmixr2} 3.0.1](https://cran.r-project.org/package=nlmixr2): Nonlinear Mixed Effects Models in Population PK/PD - [diffify](https://diffify.com/R/nlmixr2) -+ [{MomTrunc} 6.1](https://cran.r-project.org/package=MomTrunc): Moments of Folded and Doubly Truncated Multivariate -Distributions - [diffify](https://diffify.com/R/MomTrunc) -+ [{pingr} 2.0.4](https://cran.r-project.org/package=pingr): Check if a Remote Computer is Up - [diffify](https://diffify.com/R/pingr) -+ [{numberize} 1.0.1](https://cran.r-project.org/package=numberize): Convert Words to Numbers in Multiple Languages - [diffify](https://diffify.com/R/numberize) -+ [{gge} 1.9](https://cran.r-project.org/package=gge): Genotype Plus Genotype-by-Environment Biplots - [diffify](https://diffify.com/R/gge) -+ [{fastcmprsk} 1.24.10](https://cran.r-project.org/package=fastcmprsk): Fine-Gray Regression via Forward-Backward Scan - [diffify](https://diffify.com/R/fastcmprsk) -+ [{XDNUTS} 1.5](https://cran.r-project.org/package=XDNUTS): Discontinuous Hamiltonian Monte Carlo with Varying Trajectory -Length - [diffify](https://diffify.com/R/XDNUTS) -+ [{SNPassoc} 2.1-2](https://cran.r-project.org/package=SNPassoc): SNPs-Based Whole Genome Association Studies - [diffify](https://diffify.com/R/SNPassoc) -+ [{Rdiagnosislist} 1.3](https://cran.r-project.org/package=Rdiagnosislist): Manipulate SNOMED CT Diagnosis Lists - [diffify](https://diffify.com/R/Rdiagnosislist) + + [{pdp} 0.8.2](https://cran.r-project.org/package=pdp): Partial Dependence Plots - [diffify](https://diffify.com/R/pdp) -+ [{diceplot} 0.1.2](https://cran.r-project.org/package=diceplot): High Dimensional Categorical Data Visualization - [diffify](https://diffify.com/R/diceplot) -+ [{rsconnect} 1.3.2](https://cran.r-project.org/package=rsconnect): Deploy Docs, Apps, and APIs to 'Posit Connect', 'shinyapps.io', -and 'RPubs' - [diffify](https://diffify.com/R/rsconnect) -+ [{quaxnat} 1.0.1](https://cran.r-project.org/package=quaxnat): Estimation of Natural Regeneration Potential - [diffify](https://diffify.com/R/quaxnat) -+ [{pkgbuild} 1.4.5](https://cran.r-project.org/package=pkgbuild): Find Tools Needed to Build R Packages - [diffify](https://diffify.com/R/pkgbuild) -+ [{MRG} 0.3.1](https://cran.r-project.org/package=MRG): Create Non-Confidential Multi-Resolution Grids - [diffify](https://diffify.com/R/MRG) -+ [{emoji} 16.0.0](https://cran.r-project.org/package=emoji): Data and Function to Work with Emojis - [diffify](https://diffify.com/R/emoji) -+ [{combat.enigma} 1.1.1](https://cran.r-project.org/package=combat.enigma): Fit and Apply ComBat, LMM, or Prescaling Harmonization for -ENIGMA and Other Multisite MRI Data - [diffify](https://diffify.com/R/combat.enigma) -+ [{stochvol} 3.2.5](https://cran.r-project.org/package=stochvol): Efficient Bayesian Inference for Stochastic Volatility (SV) -Models - [diffify](https://diffify.com/R/stochvol) -+ [{AdverseEvents} 0.0.2](https://cran.r-project.org/package=AdverseEvents): 'shiny' Application for Adverse Event Analysis of 'OnCore' Data - [diffify](https://diffify.com/R/AdverseEvents) -+ [{withr} 3.0.2](https://cran.r-project.org/package=withr): Run Code 'With' Temporarily Modified Global State - [diffify](https://diffify.com/R/withr) -+ [{occCite} 0.5.9](https://cran.r-project.org/package=occCite): Querying and Managing Large Biodiversity Occurrence Datasets - [diffify](https://diffify.com/R/occCite) -+ [{standby} 0.2.0](https://cran.r-project.org/package=standby): Alerts, Notifications and Loading Screen in 'Shiny' - [diffify](https://diffify.com/R/standby) -+ [{link2GI} 0.6-2](https://cran.r-project.org/package=link2GI): Linking Geographic Information Systems, Remote Sensing and Other -Command Line Tools - [diffify](https://diffify.com/R/link2GI) + + [{rgl} 1.3.12](https://cran.r-project.org/package=rgl): 3D Visualization Using OpenGL - [diffify](https://diffify.com/R/rgl) + + [{liver} 1.17](https://cran.r-project.org/package=liver): "Eating the Liver of Data Science" - [diffify](https://diffify.com/R/liver) -+ [{EL} 1.3](https://cran.r-project.org/package=EL): Two-Sample Empirical Likelihood - [diffify](https://diffify.com/R/EL) -+ [{HIMA} 2.3.0](https://cran.r-project.org/package=HIMA): High-Dimensional Mediation Analysis - [diffify](https://diffify.com/R/HIMA) -+ [{Hmisc} 5.2-0](https://cran.r-project.org/package=Hmisc): Harrell Miscellaneous - [diffify](https://diffify.com/R/Hmisc) -+ [{crrstep} 2024.1.1](https://cran.r-project.org/package=crrstep): Stepwise Covariate Selection for the Fine & Gray Competing Risks -Regression Model - [diffify](https://diffify.com/R/crrstep) + + [{circumplex} 1.0.0](https://cran.r-project.org/package=circumplex): Analysis and Visualization of Circular Data - [diffify](https://diffify.com/R/circumplex) ### Videos and Podcasts @@ -322,18 +159,6 @@ Regression Model - [diffify](https://diffify.com/R/crrstep) + [Listen to the R-Weekly Highlights Podcast](https://serve.podhome.fm/r-weekly-highlights) -### Gist & Cookbook - - - -### Shiny Apps - - - -### R Internationally - - - ### Tutorials + [Vetiver: Monitoring Models in Production](https://www.jumpingrivers.com/blog/vetiver-monitoring-mlops-deployment/) @@ -386,11 +211,6 @@ Events in 3 Months: + [Weekly R Workshops for Ukraine](https://sites.google.com/view/dariia-mykhailyshyna/main/r-workshops-for-ukraine) -### Grants & Funding - - -### Datasets - ### Connect