Skip to content
This repository has been archived by the owner on Oct 16, 2023. It is now read-only.

HmtNote annotation failed #100

Open
teresaperinan opened this issue Aug 9, 2021 · 1 comment
Open

HmtNote annotation failed #100

teresaperinan opened this issue Aug 9, 2021 · 1 comment

Comments

@teresaperinan
Copy link

  • HmtNote version: 0.7.2
  • Python version: 3.7
  • Operating System: macOS

Description

HmtNote failed the annotation of the "bcftools.vcf" file available in the data folder from the repository.

What I Did

pip install hmtnote

hmtnote annotation bcftools.vcf bcftools_annot.vcf

This is the error I obtain when executing hmtnote annotation:

File "init.pxd", line 242, in init allel.opt.model
ValueError: numpy.ndarray size changed, may indicate binary incompatibility. Expected 88 from C header, got 80 from PyObject

@teresaperinan
Copy link
Author

Hello,

Does anyone know how to solve this error? Thank you in advance!

Sign up for free to subscribe to this conversation on GitHub. Already have an account? Sign in.
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant