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conda_st_rep_R_snakemake.yaml
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conda_st_rep_R_snakemake.yaml
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name: st_rep_R_snakemake
channels:
- defaults
- https://conda.anaconda.org/conda-forge
- main
- r
- conda-forge
- bioconda
- pytorch
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_gnu
- _r-mutex=1.0.1=anacondar_1
- anyio=3.6.2=pyhd8ed1ab_0
- argon2-cffi=21.3.0=pyhd8ed1ab_0
- argon2-cffi-bindings=21.2.0=py311hd4cff14_3
- arpack=3.7.0=hdefa2d7_2
- asttokens=2.2.1=pyhd8ed1ab_0
- attrs=22.2.0=pyh71513ae_0
- backcall=0.2.0=pyh9f0ad1d_0
- backports=1.0=pyhd8ed1ab_3
- backports.functools_lru_cache=1.6.4=pyhd8ed1ab_0
- beautifulsoup4=4.12.0=pyha770c72_0
- binutils_impl_linux-64=2.40=hf600244_0
- bleach=6.0.0=pyhd8ed1ab_0
- bwidget=1.9.14=ha770c72_1
- bzip2=1.0.8=h7f98852_4
- c-ares=1.18.1=h7f98852_0
- ca-certificates=2023.01.10=h06a4308_0
- cairo=1.16.0=ha61ee94_1014
- cffi=1.15.1=py311h409f033_3
- comm=0.1.3=pyhd8ed1ab_0
- curl=7.88.1=hdc1c0ab_1
- debugpy=1.6.6=py311hcafe171_0
- decorator=5.1.1=pyhd8ed1ab_0
- defusedxml=0.7.1=pyhd8ed1ab_0
- entrypoints=0.4=pyhd8ed1ab_0
- executing=1.2.0=pyhd8ed1ab_0
- expat=2.5.0=h27087fc_0
- flit-core=3.8.0=pyhd8ed1ab_0
- font-ttf-dejavu-sans-mono=2.37=hab24e00_0
- font-ttf-inconsolata=3.000=h77eed37_0
- font-ttf-source-code-pro=2.038=h77eed37_0
- font-ttf-ubuntu=0.83=hab24e00_0
- fontconfig=2.14.2=h14ed4e7_0
- fonts-conda-ecosystem=1=0
- fonts-conda-forge=1=0
- freetype=2.12.1=hca18f0e_1
- fribidi=1.0.10=h36c2ea0_0
- gcc_impl_linux-64=12.2.0=hcc96c02_19
- gettext=0.21.1=h27087fc_0
- gfortran_impl_linux-64=12.2.0=h55be85b_19
- glpk=5.0=h445213a_0
- gmp=6.2.1=h58526e2_0
- graphite2=1.3.13=h58526e2_1001
- gsl=2.7=he838d99_0
- gxx_impl_linux-64=12.2.0=hcc96c02_19
- harfbuzz=6.0.0=h8e241bc_0
- icu=70.1=h27087fc_0
- idna=3.4=pyhd8ed1ab_0
- igraph=0.10.3=hb9ddf80_0
- importlib-metadata=6.1.0=pyha770c72_0
- importlib_metadata=6.1.0=hd8ed1ab_0
- importlib_resources=5.12.0=pyhd8ed1ab_0
- ipykernel=6.22.0=pyh210e3f2_0
- ipython=8.11.0=pyh41d4057_0
- ipython_genutils=0.2.0=py_1
- jedi=0.18.2=pyhd8ed1ab_0
- jinja2=3.1.2=pyhd8ed1ab_1
- jpeg=9e=h166bdaf_2
- jsonschema=4.17.3=pyhd8ed1ab_0
- jupyter_client=8.1.0=pyhd8ed1ab_0
- jupyter_core=5.3.0=py311h38be061_0
- jupyter_events=0.6.3=pyhd8ed1ab_0
- jupyter_server=2.5.0=pyhd8ed1ab_0
- jupyter_server_terminals=0.4.4=pyhd8ed1ab_1
- jupyterlab_pygments=0.2.2=pyhd8ed1ab_0
- kernel-headers_linux-64=2.6.32=he073ed8_15
- keyutils=1.6.1=h166bdaf_0
- krb5=1.20.1=h81ceb04_0
- ld_impl_linux-64=2.40=h41732ed_0
- lerc=4.0.0=h27087fc_0
- libblas=3.9.0=16_linux64_openblas
- libcblas=3.9.0=16_linux64_openblas
- libcurl=7.88.1=hdc1c0ab_1
- libdeflate=1.17=h0b41bf4_0
- libedit=3.1.20191231=he28a2e2_2
- libev=4.33=h516909a_1
- libffi=3.4.2=h7f98852_5
- libgcc-devel_linux-64=12.2.0=h3b97bd3_19
- libgcc-ng=12.2.0=h65d4601_19
- libgfortran-ng=12.2.0=h69a702a_19
- libgfortran5=12.2.0=h337968e_19
- libglib=2.74.1=h606061b_1
- libgomp=12.2.0=h65d4601_19
- libhwloc=2.9.0=hd6dc26d_0
- libiconv=1.17=h166bdaf_0
- libjpeg-turbo=2.1.4=h166bdaf_0
- liblapack=3.9.0=16_linux64_openblas
- libnghttp2=1.52.0=h61bc06f_0
- libnsl=2.0.0=h7f98852_0
- libopenblas=0.3.21=pthreads_h78a6416_3
- libpng=1.6.39=h753d276_0
- libsanitizer=12.2.0=h46fd767_19
- libsodium=1.0.18=h36c2ea0_1
- libsqlite=3.40.0=h753d276_0
- libssh2=1.10.0=hf14f497_3
- libstdcxx-devel_linux-64=12.2.0=h3b97bd3_19
- libstdcxx-ng=12.2.0=h46fd767_19
- libtiff=4.5.0=h6adf6a1_2
- libuuid=2.32.1=h7f98852_1000
- libwebp-base=1.3.0=h0b41bf4_0
- libxcb=1.13=h7f98852_1004
- libxml2=2.10.3=hca2bb57_4
- libzlib=1.2.13=h166bdaf_4
- make=4.3=hd18ef5c_1
- markupsafe=2.1.2=py311h2582759_0
- matplotlib-inline=0.1.6=pyhd8ed1ab_0
- metis=5.1.0=h58526e2_1006
- mistune=2.0.5=pyhd8ed1ab_0
- mpfr=4.2.0=hb012696_0
- nbclassic=0.5.3=pyhb4ecaf3_3
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- nbconvert=7.2.9=pyhd8ed1ab_0
- nbconvert-core=7.2.9=pyhd8ed1ab_0
- nbconvert-pandoc=7.2.9=pyhd8ed1ab_0
- nbformat=5.8.0=pyhd8ed1ab_0
- ncurses=6.3=h27087fc_1
- nest-asyncio=1.5.6=pyhd8ed1ab_0
- notebook=6.5.3=pyha770c72_0
- notebook-shim=0.2.2=pyhd8ed1ab_0
- openssl=3.1.0=h0b41bf4_0
- packaging=23.0=pyhd8ed1ab_0
- pandoc=2.19.2=h32600fe_2
- pandocfilters=1.5.0=pyhd8ed1ab_0
- pango=1.50.14=hd33c08f_0
- parso=0.8.3=pyhd8ed1ab_0
- pcre2=10.40=hc3806b6_0
- pexpect=4.8.0=pyh1a96a4e_2
- pickleshare=0.7.5=py_1003
- pip=23.0.1=pyhd8ed1ab_0
- pixman=0.40.0=h36c2ea0_0
- pkgutil-resolve-name=1.3.10=pyhd8ed1ab_0
- platformdirs=3.2.0=pyhd8ed1ab_0
- prometheus_client=0.16.0=pyhd8ed1ab_0
- prompt-toolkit=3.0.38=pyha770c72_0
- prompt_toolkit=3.0.38=hd8ed1ab_0
- psutil=5.9.4=py311hd4cff14_0
- pthread-stubs=0.4=h36c2ea0_1001
- ptyprocess=0.7.0=pyhd3deb0d_0
- pure_eval=0.2.2=pyhd8ed1ab_0
- pycparser=2.21=pyhd8ed1ab_0
- pygments=2.14.0=pyhd8ed1ab_0
- pyrsistent=0.19.3=py311h2582759_0
- python=3.11.0=he550d4f_1_cpython
- python-dateutil=2.8.2=pyhd8ed1ab_0
- python-fastjsonschema=2.16.3=pyhd8ed1ab_0
- python-igraph=0.10.4=py311hcb6f00c_0
- python-json-logger=2.0.7=pyhd8ed1ab_0
- python_abi=3.11=3_cp311
- pyyaml=6.0=py311hd4cff14_5
- pyzmq=25.0.2=py311hd6ccaeb_0
- r-askpass=1.1=r42h06615bd_3
- r-assertthat=0.2.1=r42hc72bb7e_3
- r-backports=1.4.1=r42h06615bd_1
- r-base=4.2.3=ha7d60f8_0
- r-base64enc=0.1_3=r42h06615bd_1005
- r-beeswarm=0.4.0=r42h06615bd_2
- r-bit=4.0.5=r42h06615bd_0
- r-bit64=4.0.5=r42h06615bd_1
- r-blob=1.2.4=r42hc72bb7e_0
- r-boot=1.3_28.1=r42hc72bb7e_0
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- r-farver=2.1.1=r42h7525677_1
- r-fastmap=1.1.1=r42h38f115c_0
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- r-forcats=1.0.0=r42hc72bb7e_0
- r-foreach=1.5.2=r42hc72bb7e_1
- r-foreign=0.8_84=r42h133d619_0
- r-formatr=1.14=r42hc72bb7e_0
- r-fs=1.6.1=r42h38f115c_0
- r-future=1.32.0=r42hc72bb7e_0
- r-future.apply=1.10.0=r42hc72bb7e_0
- r-gargle=1.3.0=r42h785f33e_0
- r-generics=0.1.3=r42hc72bb7e_1
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- r-ggrastr=1.0.1=r42hc72bb7e_1
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- r-tibble=3.2.1=r42h133d619_1
- r-tidyr=1.3.0=r42h38f115c_0
- r-tidyselect=1.2.0=r42hc72bb7e_0
- r-tidyverse=1.3.2=r42hc72bb7e_1
- r-timechange=0.2.0=r42h38f115c_0
- r-timedate=4022.108=r42hc72bb7e_0
- r-tinytex=0.44=r42hc72bb7e_0
- r-triebeard=0.4.1=r42h38f115c_0
- r-ttr=0.24.3=r42h06615bd_1
- r-tzdb=0.3.0=r42h7525677_1
- r-urltools=1.7.3=r42h7525677_3
- r-utf8=1.2.3=r42h133d619_0
- r-uuid=1.1_0=r42h06615bd_1
- r-vctrs=0.6.1=r42h38f115c_0
- r-vipor=0.4.5=r42hc72bb7e_1004
- r-viridislite=0.4.1=r42hc72bb7e_1
- r-vroom=1.6.1=r42h38f115c_0
- r-withr=2.5.0=r42hc72bb7e_1
- r-xfun=0.38=r42h38f115c_0
- r-xml2=1.3.3=r42h044e5c7_2
- r-xtable=1.8_4=r42hc72bb7e_4
- r-xts=0.13.0=r42h133d619_0
- r-yaml=2.3.7=r42h133d619_0
- r-zoo=1.8_11=r42h06615bd_1
- readline=8.2=h8228510_1
- rfc3339-validator=0.1.4=pyhd8ed1ab_0
- rfc3986-validator=0.1.1=pyh9f0ad1d_0
- sed=4.8=he412f7d_0
- send2trash=1.8.0=pyhd8ed1ab_0
- setuptools=67.6.0=pyhd8ed1ab_0
- six=1.16.0=pyh6c4a22f_0
- sniffio=1.3.0=pyhd8ed1ab_0
- soupsieve=2.3.2.post1=pyhd8ed1ab_0
- stack_data=0.6.2=pyhd8ed1ab_0
- suitesparse=5.10.1=h9e50725_1
- sysroot_linux-64=2.12=he073ed8_15
- tbb=2021.8.0=hf52228f_0
- terminado=0.17.1=pyh41d4057_0
- texttable=1.6.7=pyhd8ed1ab_0
- tinycss2=1.2.1=pyhd8ed1ab_0
- tk=8.6.12=h27826a3_0
- tktable=2.10=hb7b940f_3
- tornado=6.2=py311hd4cff14_1
- traitlets=5.9.0=pyhd8ed1ab_0
- typing-extensions=4.5.0=hd8ed1ab_0
- typing_extensions=4.5.0=pyha770c72_0
- tzdata=2023b=h71feb2d_0
- wcwidth=0.2.6=pyhd8ed1ab_0
- webencodings=0.5.1=py_1
- websocket-client=1.5.1=pyhd8ed1ab_0
- wheel=0.40.0=pyhd8ed1ab_0
- xorg-kbproto=1.0.7=h7f98852_1002
- xorg-libice=1.0.10=h7f98852_0
- xorg-libsm=1.2.3=hd9c2040_1000
- xorg-libx11=1.8.4=h0b41bf4_0
- xorg-libxau=1.0.9=h7f98852_0
- xorg-libxdmcp=1.1.3=h7f98852_0
- xorg-libxext=1.3.4=h0b41bf4_2
- xorg-libxrender=0.9.10=h7f98852_1003
- xorg-libxt=1.2.1=h7f98852_2
- xorg-renderproto=0.11.1=h7f98852_1002
- xorg-xextproto=7.3.0=h0b41bf4_1003
- xorg-xproto=7.0.31=h7f98852_1007
- xz=5.2.6=h166bdaf_0
- yaml=0.2.5=h7f98852_2
- zeromq=4.3.4=h9c3ff4c_1
- zipp=3.15.0=pyhd8ed1ab_0
- zlib=1.2.13=h166bdaf_4
- zstd=1.5.2=h3eb15da_6
- pip:
- leidenalg==0.9.1
- numpy==1.24.2
- pandas==1.5.3
- pytz==2023.2