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[WIP] Download IDAKLU from pybammsolvers #4487
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A new link error cropped up, but it looks like we could get a lot of savings on time with this update. Edit: Most of the run time appears to be in the integration tests, so unfortunately the time savings are not as good as I would have hoped. |
The linkage error is the same one as #3783, coming from CasADi's plugin system. I am not sure if it's worth fixing it, since it was fixed by @martinjrobins for the linear interpolant case by dropping down to Python but IIRC there wasn't a way in CasADi for doing it for the cubic |
@agriyakhetarpal Yeah I was looking at that issue as well. As far as I can tell CasADI sets a path for plugins. I am trying to see if there is a decent workaround since this was part of #4464 My guess is that the wheels for the next release will be broken as well, but I have not confirmed it yet |
There is a workaround for Linux and macOS, but not for Windows (different toolchain); sadly, it's not decent enough to include. I think I'll raise a PR upstream in CasADi to get one part of the linkage going and see if we can migrate to a non-MSVC toolchain (which can potentially help provide that workaround for this on Windows later on). It's been on my list of things to do for a while, but I've yet to do it. |
This is fixed locally with this: |
Codecov ReportAll modified and coverable lines are covered by tests ✅
Additional details and impacted files@@ Coverage Diff @@
## develop #4487 +/- ##
===========================================
- Coverage 99.25% 98.66% -0.59%
===========================================
Files 302 302
Lines 22897 22896 -1
===========================================
- Hits 22726 22591 -135
- Misses 171 305 +134 ☔ View full report in Codecov by Sentry. 🚨 Try these New Features:
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Yes, won't work with Windows |
I had a look at this. The linker error is the same as I came across for the case of linear interpolation. The solution there was to swap to using the direct casadi function rather than their plugin system, which won't work if the casadi function is evaluated in C++ for windows as we compile everything statically. I think I might be able to access the direct bspline interface by calculating the spline coefficients in scipy and then use the casadi |
Yeah I was going to approach this by seeing if I could just change the build itself. It is something that should work if we are compiling and delivering everything correctly. If that does not work, then I will look at workarounds for interpolation |
I expect to work on this again next week, I have been caught up with other stuff |
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looks like there is still issues with the idaklu jax solver on windows, I can look into these? |
@martinjrobins Sure if you want to look at it you are more than welcome. I am hopefully going to be able to take another look this evening I recently got a Windows laptop so I could start looking into this stuff locally. Most of my commits to this branch recently have been me testing things for the release as I have been focused on getting that out the door |
I tried to figure this one out today but no luck :( It's crashing with a fatal exception when jax tries to jit compile, I'm still in the dark as to why. It might be a threading issue as the problem is intermittant (occurs in about 95% of test runs). It might be triggered by some interaction with pytest because when I copy the test into a stand-alone script it works fine |
For a stopgap solution, we can isolate these tests into their own xdist_group and allow only one worker to touch them at a time. |
Yeah that is my fallback option. I want to take a closer look at the linking/delivery as well. We have failures on windows when you download the wheels:
So it appears that the tests are working when you test in the build environment, but not in a different environment. I will be digging into this more and see what I come up with |
Hi - I took a very quick look at this yesterday and agree that it seems to be a threading issue. More specifically, |
Just a small note to say that it is not just a matter of running the tests in serial to make them pass. I had to turn off both the pytest workers, and the faulthandler, |
Description
This will separate the IDAKLU C++ code from pybamm.
Fixes #3564
Type of change
This should speed up CI by skipping the build of the C++ code.
Key checklist:
$ pre-commit run
(or$ nox -s pre-commit
) (see CONTRIBUTING.md for how to set this up to run automatically when committing locally, in just two lines of code)$ python run-tests.py --all
(or$ nox -s tests
)$ python run-tests.py --doctest
(or$ nox -s doctests
)You can run integration tests, unit tests, and doctests together at once, using
$ python run-tests.py --quick
(or$ nox -s quick
).Further checks: