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HDDM Tutorial

Learning (H)DDM

If you're new to drift diffusion modeling (DDM), you can watch a short video lecture on the topic by clicking here. The slides to this talk are also available in this repository (slides/Intro to DDM CPC Zurich 2021.pdf).

You can find a conceptual overview of the model-fitting process in the slides entitled slides/Carney Modeling Workshop 2021 HDDM Demo.pdf.

Sample code and additional self-learning material can be found in the Jupyter notebook entitled hddm_tutorial_2022.ipynb. In order to run this code, you will need to install HDDM.

Installation notes

In this repository's Wiki, you can find how-to guides for installing HDDM in various ways. If you're just playing around with HDDM, I highly recommend using Google Colab. If you're wanting to use HDDM for more intensive research purposes, I also have guides for installing HDDM on your personal computer or university's high-performance computing cluster. Please let me know if you see any errors that need correction.

Additional resources

The HDDM GitHub page can be found here.

The online documentation is as good as a textbook.

If you need help, the mailing list is very responsive.

Here are some example of studies I've run using HDDM:
Manuscript: https://www.nature.com/articles/s41598-019-48050-2
Data and scripts: https://osf.io/8ka47/