remove hd5 dependency #16
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| name: CI | |
| on: | |
| push: | |
| branches: | |
| - "*" | |
| - "!v[0-9]+.[0-9]+.[0-9]+*" | |
| pull_request: | |
| branches: | |
| - "*" | |
| - "!v[0-9]+.[0-9]+.[0-9]+*" | |
| workflow_dispatch: | |
| inputs: | |
| debug_enabled: | |
| type: boolean | |
| description: 'Run the build with tmate debugging enabled (https://github.com/marketplace/actions/debugging-with-tmate)' | |
| required: false | |
| default: false | |
| jobs: | |
| pyprms_setup: | |
| name: standard installation | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| defaults: | |
| run: | |
| shell: bash | |
| steps: | |
| - name: Checkout repo | |
| uses: actions/checkout@v4 | |
| - name: Setup Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.10" | |
| - name: Upgrade pip and install build and twine | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install wheel build 'twine<5.0.0' 'importlib_metadata<=7.0.1' 'setuptools<=72.2.0' 'numpy<2.0' | |
| - name: Base installation | |
| run: | | |
| pip --verbose install . | |
| - name: Print pyPRMS version | |
| run: | | |
| python -c "import pyPRMS; print(pyPRMS.__version__)" | |
| - name: Build pyPRMS, check dist outputs | |
| run: | | |
| python -m build | |
| twine check --strict dist/* | |
| # pyws_lint: | |
| # name: linting | |
| # runs-on: ubuntu-latest | |
| # strategy: | |
| # fail-fast: false | |
| # defaults: | |
| # run: | |
| # shell: bash | |
| # steps: | |
| # - name: Checkout repo | |
| # uses: actions/checkout@v4 | |
| # - name: Setup Python | |
| # uses: actions/setup-python@v5 | |
| # with: | |
| # python-version: "3.10" | |
| # - name: Install dependencies | |
| # run: | | |
| # pip install wheel | |
| # pip install . | |
| # pip install ".[lint]" | |
| # - name: Version info | |
| # run: | | |
| # pip -V | |
| # pip list | |
| # - name: Lint | |
| # run: ruff check . | |
| # - name: Format | |
| # run: ruff format --check . | |
| test: | |
| name: ${{ matrix.os }} py${{ matrix.python-version }} | |
| runs-on: ${{ matrix.os }} | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ "ubuntu-latest", "macos-latest", "windows-latest" ] | |
| python-version: ["3.10", "3.11"] | |
| steps: | |
| - name: Free Disk Space (Ubuntu) | |
| if: runner.os == 'Linux' | |
| uses: jlumbroso/free-disk-space@main | |
| with: | |
| tool-cache: false | |
| android: true | |
| dotnet: true | |
| haskell: true | |
| large-packages: true | |
| docker-images: true | |
| swap-storage: true | |
| - name: Setup Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{matrix.python-version}} | |
| - name: Checkout repo | |
| uses: actions/checkout@v4 | |
| - name: Install pyPRMS | |
| run: | | |
| pip install .'[dev]' | |
| - name: Version info | |
| run: | | |
| pip -V | |
| pip list | |
| - name: Test suite | |
| working-directory: tests | |
| run: coverage run -m pytest -v | |
| - name: Coverage report | |
| working-directory: tests | |
| run: coverage report -m | |
| # - name: Upload test results | |
| # if: always() | |
| # uses: actions/upload-artifact@v4 | |
| # with: | |
| # name: Test results for ${{ runner.os }}-${{ matrix.python-version }} | |
| # path: | | |
| # ./autotest/pytest_hru_1_nhm.xml | |
| # ./autotest/pytest_drb_2yr_nhm.xml | |
| # ./autotest/pytest_drb_2yr_no_dprst.xml | |
| # ./autotest/pytest_ucb_2yr_nhm.xml | |
| # - name: Upload code coverage to Codecov | |
| # uses: codecov/codecov-action@v3 | |
| # with: | |
| # file: ./autotest/coverage.xml # should be just the ucb result | |
| # # flags: unittests | |
| # env_vars: RUNNER_OS,PYTHON_VERSION | |
| # # name: codecov-umbrella | |
| # fail_ci_if_error: false | |
| # version: "v0.1.15" |