Open Problems in Single-Cell Analysis

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30 packages

control_methods/embed_by_cell_type
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration

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transformers/transform
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration

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ssam
Published Sep 19, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing

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gene_efficiency_correction
Published Sep 19, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing

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basic_qc_filter
Published Sep 20, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing

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methods/custom
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing

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methods/basic
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing

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metrics/similarity_metrics
Published Sep 20, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing

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methods/basic_qc_filter
Published Sep 22, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing

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methods/alpha_shapes
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing

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methods/normalize_by_volume
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing

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methods/ssam
Published Sep 22, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing

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methods/gene_efficiency_correction
Published Sep 22, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing

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metrics_similarity/similarity_metrics
Published Sep 23, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing

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methods_count_aggregation/basic
Published Sep 23, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing

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methods_segmentation/custom
Published Sep 23, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing

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methods_transcript_assignment/basic
Published Sep 23, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing

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methods/mnn_correct
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration

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methods/fastmnn
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration

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explanatory_analysis
Published Aug 1, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference

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data_loaders/download_10x_xenium
Published Aug 30, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing

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cell_volume_methods/alpha_shapes
Published Sep 18, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing

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expr_correction_methods/gene_efficiency_correction
Published Sep 18, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing

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normalisation_methods/normalise_by_volume
Published Sep 18, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing

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data_processors/crop_region
Published Aug 30, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing

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assignment_methods/basic
Published Sep 2, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing

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segmentation_methods/custom
Published Sep 2, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing

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data_processors/subset_reference
Published Aug 30, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing

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segmentation_methods/example
Published Aug 30, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing

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data_loaders/download_allen_brain_cell_atlas
Published Aug 30, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing

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