Galaxy Project

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137 repositories

training-material
Public
A collection of Galaxy-related training material
training tutorial materials ngs metagenomics rnaseq proteomics chip-seq usegalaxy hacktoberfest
HTML
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MIT License
•922•312•286•63•Updated Dec 18, 2024Dec 18, 2024
galaxy_codex
Public
Galaxy Communities Dock aka Galaxy Codex: catalog of Galaxy resources (tools, training, workflows)
HTML
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MIT License
•16•8•45•8•Updated Dec 17, 2024Dec 17, 2024
iwc
Public
Galaxy Workflows maintained by the Intergalactic Workflow Commission
workflow hackathon usegalaxy
Python
•73•32•36•67•Updated Dec 17, 2024Dec 17, 2024
galaxy
Public
Data intensive science for everyone.
science workflow bioinformatics pipeline genomics workflow-engine ngs sequencing dna usegalaxy
Python
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Other
•1k•1.4k•2.1k•258•Updated Dec 17, 2024Dec 17, 2024
galaxy-release-util
Public
galaxy-release-util
Python
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MIT License
•3•1•0•1•Updated Dec 17, 2024Dec 17, 2024
total-perspective-vortex
Public
Total Perspective Vortex provides an installable set of dynamic rules for the Galaxy application that can route entities (Tools, Users, Roles) to appropriate job destinations based on a configurable yaml file.
Python
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MIT License
•12•13•16•8•Updated Dec 17, 2024Dec 17, 2024
usegalaxy-tools
Public
usegalaxy.* common tools
Shell
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MIT License
•53•12•68•7•Updated Dec 17, 2024Dec 17, 2024
tools-iuc
Public
Tool Shed repositories maintained by the Intergalactic Utilities Commission
tools usegalaxy hacktoberfest toolshed wrappers iuc
HTML
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MIT License
•441•165•412•303•Updated Dec 17, 2024Dec 17, 2024
galaxy-hub
Public
Galaxy Community Hub
community documentation home homepage hub usegalaxy hacktoberfest
HTML
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Other
•282•99•173•25•Updated Dec 15, 2024Dec 15, 2024
brc-analytics
Public
TypeScript
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MIT License
•4•0•38•2•Updated Dec 13, 2024Dec 13, 2024
usegalaxy-playbook
Public
Ansible Playbook for usegalaxy.org
python ansible playbook usegalaxy
Shell
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Academic Free License v3.0
•25•31•98•2•Updated Dec 12, 2024Dec 12, 2024
infrastructure-playbook
Public
Ansible playbook for managing Galaxy infrastructure. For the playbook managing Galaxy itself, see https://github.com/galaxyproject/usegalaxy-playbook/
Jinja
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MIT License
•14•11•6•7•Updated Dec 12, 2024Dec 12, 2024
planemo-ci-action
Public
Test, deploy, or lint changed Galaxy tools or workflows using Planemo.
Shell
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MIT License
•5•6•5•7•Updated Dec 10, 2024Dec 10, 2024
gxy.io
Public
The gxy.io link shortening service
Shell
•
MIT License
•9•8•0•1•Updated Dec 10, 2024Dec 10, 2024
wheelforge
Public
Build Python wheels from recipes using cibuildwheel
Python
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MIT License
•8•4•1•0•Updated Dec 7, 2024Dec 7, 2024
galaxy-charts
Public
Vue
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MIT License
•0•0•0•0•Updated Dec 7, 2024Dec 7, 2024
slurmscale-playbook
Public
Ansible Playbook for usegalaxy.org SlurmScale
MIT License
•0•0•0•0•Updated Dec 4, 2024Dec 4, 2024
ansible-cvmfs
Public
An Ansible role for installing and configuring CernVM-FS (CVMFS)
C
•17•13•4•9•Updated Dec 4, 2024Dec 4, 2024
tpv-shared-database
Public
A shared database of rules for Total Perspective Vortex used by the usegalaxy.* federation.
MIT License
•12•3•14•8•Updated Dec 3, 2024Dec 3, 2024
video-lectures
Public
CSS
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MIT License
•4•1•0•0•Updated Dec 3, 2024Dec 3, 2024
TIS_methods_review
Public
Jupyter Notebook
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MIT License
•0•1•0•0•Updated Dec 3, 2024Dec 3, 2024
gxformat2
Public
Galaxy Workflow Format 2
HTML
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MIT License
•5•9•12•6•Updated Dec 3, 2024Dec 3, 2024
itcr
Public archive
MIT License
•0•0•6•0•Updated Dec 2, 2024Dec 2, 2024
admin-training
Public
Galaxy Admin Training
training nginx ansible development admin tools cluster supervisor usegalaxy hacktoberfest
HCL
•62•60•37•1•Updated Dec 1, 2024Dec 1, 2024
galaxyproject.github.io
Public
Informational repository, highlighting the code offerings of Galaxyproject
HTML
•5•2•1•1•Updated Dec 1, 2024Dec 1, 2024
planemo-machine
Public
A packer.io configuration for building out Galaxy (http://galaxyproject.org/) tool development environments.
usegalaxy docker-image virtualbox-ova planemo-machine
Jinja
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MIT License
•16•10•23•3•Updated Dec 1, 2024Dec 1, 2024
gx-tool-db-panel-sync
Public
script and outputs for syncing EU flavors to tool panel views
Shell
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Creative Commons Zero v1.0 Universal
•1•0•0•0•Updated Dec 1, 2024Dec 1, 2024
p4
Public
Proper Prior Planning Prevents Poorly Performed PRs...Probably
pr pull-requests bot
Python
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MIT License
•4•2•3•0•Updated Dec 1, 2024Dec 1, 2024
gx-tool-db-project
Public
A project containing database created with the gx-tool-db tool.
Shell
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MIT License
•1•1•0•0•Updated Dec 1, 2024Dec 1, 2024
homebrew-tap
Public
A Homebrew (http://brew.sh/) tap for Galaxy (http://galaxyproject.org/) related software.
Ruby
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MIT License
•2•2•1•1•Updated Dec 1, 2024Dec 1, 2024