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    66 repositories

    • freezeman

      Public
      Freezer management & sample tracking system
      Python
      •1•7•0•4•Updated Dec 24, 2024Dec 24, 2024

    • MultiQC_c3g

      Public
      MultiQC plugin specific to GenPipes and C3G reports
      HTML
      •0•0•0•0•Updated Dec 23, 2024Dec 23, 2024

    • GenPipes_Docs

      Public
      GenPipes Read the Docs repository
      Mermaid
      •5•21•6•0•Updated Dec 23, 2024Dec 23, 2024

    • MoH_Automation

      Public
      Automation for MoH. It includes capabilities for file transfer, tracking, and genpipes, initiation.
      Python
      •0•0•0•0•Updated Dec 20, 2024Dec 20, 2024

    • elastic-HPC

      Public
      HCL
      •1•1•0•0•Updated Dec 20, 2024Dec 20, 2024

    • monitor

      Public
      C3G Run Processing monitor (for reporting)
      Groovy
      •0•0•0•1•Updated Dec 19, 2024Dec 19, 2024

    • ops_tools

      Public
      Operational tools for production or hacking
      Python
      •0•0•0•0•Updated Dec 19, 2024Dec 19, 2024

    • triton

      Public
      TypeScript
      •0•0•4•3•Updated Dec 17, 2024Dec 17, 2024

    • CoVSeQ_tools

      Public
      R
      •0•0•0•0•Updated Dec 13, 2024Dec 13, 2024

    • bento_provisioning

      Public
      Shell
      •0•0•0•1•Updated Nov 28, 2024Nov 28, 2024

    • project_tracking

      Public
      Python
      •
      GNU General Public License v3.0
      •0•3•2•0•Updated Nov 20, 2024Nov 20, 2024

    • web-app-template

      Public template
      0•0•0•0•Updated Nov 14, 2024Nov 14, 2024

    • project_tracking_cli

      Public
      Python
      •
      GNU General Public License v3.0
      •0•1•1•0•Updated Nov 12, 2024Nov 12, 2024

    • Template_Convertor

      Public
      MOH template conversion project
      Python
      •0•1•1•1•Updated Nov 12, 2024Nov 12, 2024

    • PARPAL

      Public
      GZ - Kuzmin website
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Nov 11, 2024Nov 11, 2024

    • genpipes_in_a_container

      Public
      Shell
      •1•5•6•0•Updated Oct 30, 2024Oct 30, 2024

    • pipes_stats

      Public
      JavaScript
      •0•0•0•0•Updated Oct 3, 2024Oct 3, 2024

    • puppet-magic_castle

      Public
      Puppet Environment repo for Magic Castle - https://github.com/ComputeCanada/magic_castle
      Puppet
      •
      MIT License
      •21•0•0•0•Updated Sep 12, 2024Sep 12, 2024

    • magic_castle

      Public
      Terraform modules to replicate the HPC user experience in the cloud
      HCL
      •
      MIT License
      •39•0•0•0•Updated Sep 9, 2024Sep 9, 2024

    • puppet-module-globus

      Public
      Globus deployment for MC on SD4H
      Ruby
      •
      Other
      •7•0•1•0•Updated Apr 3, 2024Apr 3, 2024

    • epivar-browser

      Public
      Source code for the EpiVar browser, a web application to search for eQTL/epigenetic signal-associated variants and merge bigWig tracks by genotype.
      genomicsepigeneticsgenomics-visualizationepigenomics
      JavaScript
      •
      GNU Lesser General Public License v3.0
      •0•2•0•0•Updated Mar 1, 2024Mar 1, 2024

    • bw-merge-window

      Public
      Command-line utility for merging a window of a set of bigWigs, inspired by the previous C3G bigWigMergePlus tool.
      Python
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Jan 19, 2024Jan 19, 2024

    • moh_data_wrangling

      Public
      0•0•0•0•Updated Dec 8, 2023Dec 8, 2023

    • grants

      Public
      Application to manage grants
      JavaScript
      •
      GNU Lesser General Public License v3.0
      •0•0•0•0•Updated Oct 6, 2023Oct 6, 2023

    • CINECA

      Public
      Scripts to wrangle CINECA data into the Bento Platform
      Python
      •0•0•0•0•Updated Aug 29, 2023Aug 29, 2023

    • d-path

      Public
      JavaScript
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Aug 10, 2023Aug 10, 2023

    • bacterial-genome-synchronizer

      Public
      JavaScript
      •0•0•0•8•Updated Apr 30, 2023Apr 30, 2023

    • arc

      Public
      0•0•1•0•Updated Feb 23, 2023Feb 23, 2023

    • mhcut-browser

      Public
      Data browser web application for the MHcut project.
      JavaScript
      •
      GNU General Public License v3.0
      •1•0•0•12•Updated Jan 7, 2023Jan 7, 2023

    • micm-project-match

      Public
      A database-driven, lightweight web application with the purpose of matching McGill research data projects, with masters and doctoral students looking for interesting projects to analyse.
      JavaScript
      •2•3•6•23•Updated Jan 5, 2023Jan 5, 2023